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Commit [db6163]

Initial commit

Authored by: MarcoTheBlack 2025-04-21

Browse code at this revision

Parent: [45c3c2]

Child: [bdbb47]

1 2 3 > >> (Page 1 of 3)

added	.gitignore
added	Inference-README.md
added	LICENSE
added	README.md
added	__init__.py
added	data_prep/README.md
added	data_prep/construct_kg/README.md
added	data_prep/construct_kg/add_orphanet_data_to_kg.py
added	data_prep/construct_kg/build_graph.ipynb
added	data_prep/construct_kg/prepare_graph.py
added	data_prep/create_mygene2_cohort/README.md
added	data_prep/create_mygene2_cohort/mygene2.html
added	data_prep/create_mygene2_cohort/preprocess_mygene2.py
added	data_prep/create_mygene2_cohort/retrieve_mygene2.py
added	data_prep/create_mygene2_cohort/retrieve_mygene2.sh
added	data_prep/create_udn_cohort/README.md
added	data_prep/create_udn_cohort/create_exomiser_cohort/README.md
added	data_prep/create_udn_cohort/create_exomiser_cohort/run_exomiser.sh
added	data_prep/create_udn_cohort/create_exomiser_cohort/udn-analysis-exome.yml
added	data_prep/get_orpha_disease_categories.py
added	data_prep/preprocess.py
added	data_prep/preprocess_patients_and_kg.py
added	data_prep/process_orpha_to_omim_map.py
added	data_prep/shortest_paths/README.md
added	data_prep/shortest_paths/add_spl_to_patients.py

.gitignore Diff Switch to side-by-side view

Inference-README.md Diff Switch to side-by-side view

LICENSE Diff Switch to side-by-side view

README.md Diff Switch to side-by-side view

init.py Diff Switch to side-by-side view

data_prep/README.md Diff Switch to side-by-side view

data_prep/construct_kg/README.md Diff Switch to side-by-side view

data_prep/construct_kg/add_orphanet_data_to_kg.py Diff Switch to side-by-side view

data_prep/construct_kg/build_graph.ipynb Diff Switch to side-by-side view

data_prep/construct_kg/prepare_graph.py Diff Switch to side-by-side view

data_prep/create_mygene2_cohort/README.md Diff Switch to side-by-side view

data_prep/create_mygene2_cohort/mygene2.html Diff Switch to side-by-side view

data_prep/create_mygene2_cohort/preprocess_mygene2.py Diff Switch to side-by-side view

data_prep/create_mygene2_cohort/retrieve_mygene2.py Diff Switch to side-by-side view

data_prep/create_mygene2_cohort/retrieve_mygene2.sh Diff Switch to side-by-side view

data_prep/create_udn_cohort/README.md Diff Switch to side-by-side view

data_prep/create_udn_cohort/create_exomiser_cohort/README.md Diff Switch to side-by-side view

data_prep/create_udn_cohort/create_exomiser_cohort/run_exomiser.sh Diff Switch to side-by-side view

data_prep/create_udn_cohort/create_exomiser_cohort/udn-analysis-exome.yml Diff Switch to side-by-side view

data_prep/get_orpha_disease_categories.py Diff Switch to side-by-side view

data_prep/preprocess.py Diff Switch to side-by-side view

data_prep/preprocess_patients_and_kg.py Diff Switch to side-by-side view

data_prep/process_orpha_to_omim_map.py Diff Switch to side-by-side view

data_prep/shortest_paths/README.md Diff Switch to side-by-side view

data_prep/shortest_paths/add_spl_to_patients.py Diff Switch to side-by-side view

1 2 3 > >> (Page 1 of 3)