Metagenomic-DeepFRI / Git / Commit [334319]

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Metagenomic-DeepFRI

Downloads: 1

Commit [334319] main

Initial commit

Authored by: MarcoTheBlack 2025-04-21

Browse code at this revision

Parent: [554a63]

<< < 1 2 3 > >> (Page 2 of 3)

added	docs/cli.rst
added	docs/conf.py
added	docs/examples/index.rst
added	docs/index.rst
added	docs/install.rst
added	docs/make.bat
added	docs/requirements.txt
added	docs/results.rst
added	mDeepFRI/__init__.py
added	mDeepFRI/alignment.py
added	mDeepFRI/bio_utils.py
added	mDeepFRI/cli.py
added	mDeepFRI/contact_map_utils.pyx
added	mDeepFRI/database.py
added	mDeepFRI/mmseqs.py
added	mDeepFRI/pdb.py
added	mDeepFRI/pipeline.py
added	mDeepFRI/predict.pyx
added	mDeepFRI/tests/__init__.py
added	mDeepFRI/tests/data/GCA_000731455.1.proteins.fa.gz
added	mDeepFRI/tests/data/small_query.faa
added	mDeepFRI/tests/test_alignment.py
added	mDeepFRI/tests/test_bio_utils.py
added	mDeepFRI/tests/test_conctact_map.py
added	mDeepFRI/tests/test_install.py

docs/cli.rst Diff Switch to side-by-side view

docs/conf.py Diff Switch to side-by-side view

docs/examples/index.rst Diff Switch to side-by-side view

docs/index.rst Diff Switch to side-by-side view

docs/install.rst Diff Switch to side-by-side view

docs/make.bat Diff Switch to side-by-side view

docs/requirements.txt Diff Switch to side-by-side view

docs/results.rst Diff Switch to side-by-side view

mDeepFRI/init.py Diff Switch to side-by-side view

mDeepFRI/alignment.py Diff Switch to side-by-side view

mDeepFRI/bio_utils.py Diff Switch to side-by-side view

mDeepFRI/cli.py Diff Switch to side-by-side view

mDeepFRI/contact_map_utils.pyx Diff Switch to side-by-side view

mDeepFRI/database.py Diff Switch to side-by-side view

mDeepFRI/mmseqs.py Diff Switch to side-by-side view

mDeepFRI/pdb.py Diff Switch to side-by-side view

mDeepFRI/pipeline.py Diff Switch to side-by-side view

mDeepFRI/predict.pyx Diff Switch to side-by-side view

mDeepFRI/tests/init.py Diff Switch to side-by-side view

mDeepFRI/tests/data/GCA_000731455.1.proteins.fa.gz

Binary file was added.

mDeepFRI/tests/data/small_query.faa Diff Switch to side-by-side view

mDeepFRI/tests/test_alignment.py Diff Switch to side-by-side view

mDeepFRI/tests/test_bio_utils.py Diff Switch to side-by-side view

mDeepFRI/tests/test_conctact_map.py Diff Switch to side-by-side view

mDeepFRI/tests/test_install.py Diff Switch to side-by-side view

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