--- a
+++ b/setup.py
@@ -0,0 +1,32 @@
+#!/usr/bin/env python
+
+import os,sys
+import setuptools
+
+
+with open("README.md", "r") as fh:
+    long_description = fh.read()
+
+
+setuptools.setup(
+    name="DeepMod", # Replace with your own username
+    version="0.1.3",
+    author="Qian Liu",
+    author_email="",
+    description="A deep-learning tool to detect DNA modifications using Nanopore long-read sequencing data",
+    long_description=long_description,
+    long_description_content_type="text/markdown",
+    url="https://github.com/WGLab/DeepMod",
+    #packages=setuptools.find_packages(),
+    packages=['DeepMod_scripts'],
+    package_dir={'DeepMod_scripts': 'bin/DeepMod_scripts'},
+    scripts=['bin/DeepMod.py', 'DeepMod_tools/cal_EcoliDetPerf.py', 'DeepMod_tools/generate_motif_pos.py', 'DeepMod_tools/hm_cluster_predict.py', 'DeepMod_tools/sum_chr_mod.py'],
+    package_data={'train_deepmod': ['train_deepmod/*/*']},
+    #data_files=[('train_deepmod', ['train_deepmod/*'])],
+    classifiers=[
+        "Programming Language :: Python",
+        'Intended Audience :: Science/Research',
+        "License :: OSI Approved :: GNU Library or Lesser General Public License (LGPL)",
+        "Operating System :: OS Independent",
+    ],
+)