#When eigenvec or tsv are converted to PKL, the PANDAS version and model version should be the same as DNNGP.

#So, please run the program in a DNNGP environment.

import pandas as pd

########Set path section

inpath=r".\wheat599_pc95.tsv" #Set input path

outpath=r".\wheat599_pc95.pkl" #Set output path

########Conversion format section

inpath=inpath.replace('\\','/') #Replace '\' with '/' in the input path.

outpath=outpath.replace('\\','/') #Replace '\' with '/' in the output path.

if "eigenvec" in inpath:

    Gene = pd.read_csv(inpath, sep='\t',header=0,index_col=1) #read eigenvec file.

    del Gene['#FID'] #Delete the '#FID' column

    Gene.to_pickle(outpath) #output pkl file

elif "csv" in inpath:

    Gene = pd.read_csv(inpath, sep=',',header=0,index_col=0) #read csv file.

    Gene.to_pickle(outpath) #output pkl file

else:

    Gene = pd.read_csv(inpath, sep='\t',header=0,index_col=0) #read tsv file.

    Gene.to_pickle(outpath) #output pkl file