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--- a +++ b/web/server/server.html @@ -0,0 +1,315 @@ +<!DOCTYPE html> +<html lang="en"> + +<head> + <!-- Google tag (gtag.js) --> + <script async src="https://www.googletagmanager.com/gtag/js?id=G-0LTP0WK7EM"></script> + <script> + window.dataLayer = window.dataLayer || []; + function gtag() { dataLayer.push(arguments); } + gtag('js', new Date()); + + gtag('config', 'G-0LTP0WK7EM'); + </script> + <meta charset="UTF-8"> + <meta name="viewport" content="width=device-width, initial-scale=1.0"> + <title>Server - DNAnalyzer</title> + <link rel="stylesheet" href="../style.css"> + <link rel="stylesheet" href="server.css"> + <link + href="https://fonts.googleapis.com/css2?family=Inter:wght@300;400;500;600;700&family=IBM+Plex+Mono:wght@400;500;600&display=swap" + rel="stylesheet"> + <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/6.4.0/css/all.min.css"> + <link rel="shortcut icon" href="../assets/icons/Icon_Dark_BG.svg" type="image/svg+xml"> +</head> + +<body> + <!-- Background effects --> + <div class="bg-gradient"> + <div class="bg-blob bg-blob-1"></div> + <div class="bg-blob bg-blob-2"></div> + </div> + + <!-- Navbar --> + <nav class="navbar" id="navbar"> + <div class="container navbar-container"> + <a href="../index.html" class="logo"> + <img src="../assets/icons/Icon_Dark_BG.svg" alt="DNAnalyzer Logo"> + <span class="logo-text">DNAnalyzer</span> + </a> + + <button class="mobile-toggle" id="mobileToggle" aria-label="Toggle navigation"> + <i class="fas fa-bars"></i> + </button> + + <ul class="nav-links" id="navLinks"> + <li><a href="../index.html">Home</a></li> + <li><a href="../features/features.html">Features</a></li> + <li><a href="../analyzer/analyzer.html">Analyzer</a></li> + <li><a href="server.html" class="active">Server</a></li> + <li><a href="../docs/docs.html">Docs</a></li> + <li><a href="../about/about.html">About</a></li> + </ul> + + <div class="nav-buttons"> + <a href="https://github.com/VerisimilitudeX/DNAnalyzer" class="btn btn-secondary btn-sm"> + <i class="fab fa-github btn-icon"></i> GitHub + </a> + </div> + </div> + </nav> + + <!-- Main Content --> + <main> + <section class="hero"> + <div class="container"> + <div class="hero-content"> + <div class="hero-headings"> + <h1>DNAnalyzer <span>Server</span></h1> + <p class="hero-subtitle">Set up and run your own DNAnalyzer server for local development and + advanced genomic analysis</p> + </div> + </div> + </div> + </section> + + <section class="section"> + <div class="container"> + <div class="section-title"> + <h2>Server Status</h2> + <p>Check your local server installation status and requirements</p> + </div> + + <div class="card-grid"> + <div class="card"> + <div class="card-icon"> + <i class="fas fa-server"></i> + </div> + <h3 class="card-title">Server Status</h3> + <div id="server-status" class="status-value">Checking...</div> + <p>Local Server</p> + </div> + + <div class="card"> + <div class="card-icon"> + <i class="fas fa-memory"></i> + </div> + <h3 class="card-title">System Requirements</h3> + <div class="status-value">2GB+</div> + <p>Minimum RAM</p> + </div> + + <div class="card"> + <div class="card-icon"> + <i class="fas fa-code-branch"></i> + </div> + <h3 class="card-title">Version</h3> + <div class="status-value">Java 17+</div> + <p>Required Runtime</p> + </div> + </div> + </div> + </section> + + <section class="section section-bg-gradient"> + <div class="container"> + <div class="section-title"> + <h2>Quick Start Guide</h2> + <p>Follow these steps to set up your local DNAnalyzer server</p> + </div> + + <div class="steps-container"> + <div class="step-item"> + <div class="step-content"> + <h3>Clone the Repository</h3> + <div class="code-block"> + <code>git clone https://github.com/VerisimilitudeX/DNAnalyzer.git && cd DNAnalyzer</code> + <button class="copy-button" onclick="copyCloneCommand()">Copy</button> + </div> + <p>Clone the repository and navigate to the project directory</p> + </div> + </div> + + <div class="step-item"> + <div class="step-content"> + <h3>Setup Gradle</h3> + <div class="code-block"> + <code>chmod +x ./gradlew</code> + <button class="copy-button" onclick="copyChmodCommand()">Copy</button> + </div> + <p>Make the Gradle wrapper executable (Unix/macOS systems)</p> + </div> + </div> + + <div class="step-item"> + <div class="step-content"> + <h3>Build the Project</h3> + <div class="code-block"> + <code>./gradlew clean bootJar</code> + <button class="copy-button" onclick="copyBuildCommand()">Copy</button> + </div> + <p>Build the project (this may take a few minutes on first run)</p> + </div> + </div> + + <div class="step-item"> + <div class="step-content"> + <h3>Start the Server</h3> + <div class="code-block"> + <code>java -jar build/libs/DNAnalyzer.jar</code> + <button class="copy-button" onclick="copyRunCommand()">Copy</button> + </div> + <p>Start the local server on port 8080</p> + </div> + </div> + </div> + </div> + </section> + + <section class="section" id="troubleshooting"> + <div class="container"> + <div class="section-title"> + <h2>Troubleshooting</h2> + <p>Common issues and their solutions</p> + </div> + + <div class="feature-card"> + <div class="feature-icon feature-icon-magenta"> + <i class="fas fa-network-wired"></i> + </div> + <div class="feature-content"> + <h3>Port Already in Use</h3> + <p>If port 8080 is already in use, you may see an error like "Address already in use". To fix + this:</p> + <ul> + <li>Close any other applications using port 8080</li> + <li>Or modify the port in application.yml to use a different port</li> + <li>Alternatively, use the command line option to specify a different port</li> + </ul> + <div class="code-block"> + <code>java -jar build/libs/DNAnalyzer.jar --server.port=8090</code> + </div> + </div> + </div> + + <div class="feature-card"> + <div class="feature-icon feature-icon-blue"> + <i class="fab fa-java"></i> + </div> + <div class="feature-content"> + <h3>Java Version Issues</h3> + <p>If you see "UnsupportedClassVersionError", make sure you have Java 17+ installed:</p> + <div class="code-block"> + <code>java -version</code> + </div> + <p>Download and install Java 17 or later if your version is outdated.</p> + </div> + </div> + + <div class="feature-card"> + <div class="feature-icon feature-icon-orange"> + <i class="fas fa-exclamation-triangle"></i> + </div> + <div class="feature-content"> + <h3>Build Failures</h3> + <p>If you encounter build errors, try these solutions:</p> + <ul> + <li>Run './gradlew clean' first to clear any cached files</li> + <li>Make sure your Java installation is properly configured</li> + <li>Ensure you have write permissions in the project directory</li> + <li>Update Gradle wrapper if needed with './gradlew wrapper --gradle-version=7.5'</li> + </ul> + </div> + </div> + </div> + </section> + + <section class="section section-bg-dark"> + <div class="container text-center"> + <h2>Ready to Contribute?</h2> + <p class="mb-xl">Join our community and help improve DNAnalyzer's server capabilities.</p> + + <div class="hero-buttons" style="justify-content: center;"> + <a href="https://github.com/VerisimilitudeX/DNAnalyzer" class="btn btn-primary"> + <i class="fab fa-github btn-icon"></i> Fork on GitHub + </a> + <a href="https://discord.gg/xNpujz49gj" class="btn btn-secondary"> + <i class="fab fa-discord btn-icon"></i> Join Discord + </a> + </div> + </div> + </section> + </main> + + <!-- Footer --> + <footer class="footer"> + <div class="container"> + <div class="footer-grid"> + <div class="footer-brand"> + <img src="../assets/icons/Icon_Dark_BG.svg" alt="DNAnalyzer Logo"> + <p>DNAnalyzer is a powerful, privacy-focused DNA analysis tool using cutting-edge machine learning + models for accurate, on-device genomic analysis.</p> + + <div class="footer-social"> + <a href="https://github.com/VerisimilitudeX/DNAnalyzer" class="social-link"> + <i class="fab fa-github"></i> + </a> + <a href="https://discord.gg/xNpujz49gj" class="social-link"> + <i class="fab fa-discord"></i> + </a> + <a href="https://twitter.com/DNAnalyzer_" class="social-link"> + <i class="fab fa-twitter"></i> + </a> + </div> + </div> + + <div class="footer-nav"> + <h4>Product</h4> + <ul> + <li><a href="../features/features.html">Features</a></li> + <li><a href="../analyzer/analyzer.html">DNA Analyzer</a></li> + <li><a href="server.html">Server</a></li> + <li><a href="../docs/docs.html">Documentation</a></li> + </ul> + </div> + + <div class="footer-nav"> + <h4>Resources</h4> + <ul> + <li><a href="../docs/getting-started.md">Getting Started</a></li> + <li><a href="../docs/citations.md">Citations</a></li> + <li><a href="../docs/research/genes.md">Gene Research</a></li> + <li><a href="../docs/samples/cli-arguments-examples.md">CLI Examples</a></li> + </ul> + </div> + + <div class="footer-nav"> + <h4>Community</h4> + <ul> + <li><a href="https://github.com/VerisimilitudeX/DNAnalyzer">GitHub</a></li> + <li><a href="https://discord.gg/xNpujz49gj">Discord</a></li> + <li><a href="../docs/contributing/CONTRIBUTING.md">Contributing</a></li> + <li><a href="../CODE_OF_CONDUCT.md">Code of Conduct</a></li> + </ul> + </div> + </div> + + <div class="footer-bottom"> + <div class="footer-copyright"> + Copyright © Piyush Acharya 2025. DNAnalyzer is a fiscally sponsored 501(c)(3) nonprofit (EIN: + 81-2908499). MIT License. + </div> + + <div class="footer-links"> + <a href="../LICENSE.md">License</a> + <a href="../SECURITY.md">Security</a> + <a href="../CITATION.cff">Citation</a> + </div> + </div> + </div> + </footer> + + <script src="server.js"></script> +</body> + +</html> \ No newline at end of file