--- a +++ b/docs/research/genes-i2kmt.md @@ -0,0 +1,38 @@ +## Genes and their evolutionary background that are involved in diseases + +#### Common diseases caused by point mutations +- Cystic Fibrosis +- Familial hypercholesterolemia +- Hemophilia B +- Phenylketonuria +- Autosomal dominant polycystic kidney disease (ADPKD) +- Sickle cell disease +- Tay–Sachs disease + +#### Mutations and phenotypes that provide evolutionary advantages/differations +- Thalassemia +- P450 genes +--- + +#### Cystic Fibrosis +- CFTR gene: deletion of a single amino-acid +- CFTR wild type sequence: [download dataset](https://www.ncbi.nlm.nih.gov/gene/1080) +- CFTR mutation: + - most famous mutation[^2]: c.1521_1523delCTT, p.Phe508del + +#### Familial hypercholesterolemia +- APOB gene: Apolipoprotein B +- APOB wild type sequence: [download dataset](https://www.ncbi.nlm.nih.gov/gene?Db=gene&Cmd=DetailsSearch&Term=338) +- APOB mutation: + - most famous mutation[^1]: APOB: p. R3527Q + +#### Hemophilia B +- F9 gene: Factor IX +- F9 wild type sequence: [download dataset](https://www.ncbi.nlm.nih.gov/gene/2158) +- F9 mutations[^3]: [view missense mutations](https://view.officeapps.live.com/op/view.aspx?src=https%3A%2F%2Fwww.cdc.gov%2Fncbddd%2Fhemophilia%2Fdocuments%2Ff9-chbmp-v5-5-5-15.xlsx&wdOrigin=BROWSELINK) + + + +[^1]: https://academic.oup.com/hmg/article/23/7/1817/653825 +[^2]: https://www.cff.org/research-clinical-trials/types-cftr-mutations +[^3]: https://www.cdc.gov/ncbddd/hemophilia/champs.html