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b/CLI/DensityAnalysis/DensityAnalysis.xml |
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<?xml version="1.0" encoding="utf-8"?> |
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<executable> |
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<category>Quantification.Musculoskeletal</category> |
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<index>0</index> |
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<title>Density Analysis</title> |
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<description><![CDATA[Perform Musculoskeletal Density Analysis on an image]]></description> |
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<version>0.1.0.</version> |
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<documentation-url>https://github.com/username/project</documentation-url> |
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<license/> |
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<contributor>Joseph Szatkowski (Washington University in St. Louis)</contributor> |
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<acknowledgements> |
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<![CDATA[Developed by the Washington University in St. Louis Musculoskeletal Reseach Center with the assistance of Michael Brodt, Anish Jagannathan, Matthew Silva, and Simon Tang.\n |
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This file was partially funded by NIH grant P30 AR074992.]]></acknowledgements> |
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<parameters> |
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<image> |
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<name>image</name> |
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<label>Image</label> |
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<channel>input</channel> |
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<index>0</index> |
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<description><![CDATA[The image to be analyzed]]></description> |
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<default>1.0</default> |
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</image> |
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<image type="label" reference ="image"> |
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<name>mask</name> |
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<label>Mask</label> |
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<channel>input</channel> |
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<index>1</index> |
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<description><![CDATA[Mask representing the bone area to be analyzed]]></description> |
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</image> |
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<float> |
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<name>voxelSize</name> |
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<label>Voxel Size</label> |
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<channel>input</channel> |
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<index>2</index> |
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<description><![CDATA[The length of 1 voxel side in mm]]></description> |
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</float> |
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<float> |
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<name>slope</name> |
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<label>Slope</label> |
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<channel>input</channel> |
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<index>3</index> |
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<description><![CDATA[The slope for density conversion]]></description> |
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</float> |
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<float> |
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<name>intercept</name> |
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<label>Intercept</label> |
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<channel>input</channel> |
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<index>4</index> |
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<description><![CDATA[The slope intercept for density conversion]]></description> |
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</float> |
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<string> |
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<name>inputName</name> |
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<label>Input Name</label> |
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<channel>input</channel> |
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<index>5</index> |
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<description><![CDATA[The name of the input image]]></description> |
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</string> |
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<string> |
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<name>output</name> |
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<label>Output Directory</label> |
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<channel>input</channel> |
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<index>6</index> |
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<description><![CDATA[The directory to output data files to]]></description> |
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</string> |
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</parameters> |
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</executable> |