32 lines (27 with data), 849 Bytes

#!/bin/bash

# Bash interface for DOSMA
#
# @usage (from terminal/command line):
#   Command line interface: ./dosma command-line-args
#   User Interface: ./dosma --app
#
# @initialization protocol:
#   1. Navigate to this folder
#   2. Run "chmod +x dosma" from command-line (Linux) or Terminal (MacOS)
#
# @author: Arjun Desai, Stanford University
#          (c) Stanford University, 2019

BIN_DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" >/dev/null 2>&1 && pwd )"
DOSMA_DIR="$( cd "$( dirname "${BIN_DIR}" )" >/dev/null 2>&1 && pwd )"
DOSMA_ENV_NAME="dosma_env"


# Check if environment is active
if [[ -z `conda env list | grep \* | grep $DOSMA_ENV_NAME` ]]; then
    echo "Activate $DOSMA_ENV_NAME before running this script."
    exit 1
fi

cd $DOSMA_DIR
if [[ $1 == "--app" ]]; then
    python -m dosma.app
else
    python -m dosma.cli $*
fi