|
a |
|
b/docs/conf.py |
|
|
1 |
#!/usr/bin/env python |
|
|
2 |
# |
|
|
3 |
# wsic documentation build configuration file, created by |
|
|
4 |
# sphinx-quickstart on Fri Jun 9 13:47:02 2017. |
|
|
5 |
# |
|
|
6 |
# This file is execfile()d with the current directory set to its |
|
|
7 |
# containing dir. |
|
|
8 |
# |
|
|
9 |
# Note that not all possible configuration values are present in this |
|
|
10 |
# autogenerated file. |
|
|
11 |
# |
|
|
12 |
# All configuration values have a default; values that are commented out |
|
|
13 |
# serve to show the default. |
|
|
14 |
|
|
|
15 |
# If extensions (or modules to document with autodoc) are in another |
|
|
16 |
# directory, add these directories to sys.path here. If the directory is |
|
|
17 |
# relative to the documentation root, use os.path.abspath to make it |
|
|
18 |
# absolute, like shown here. |
|
|
19 |
# |
|
|
20 |
import os |
|
|
21 |
import sys |
|
|
22 |
|
|
|
23 |
sys.path.insert(0, os.path.abspath("..")) |
|
|
24 |
|
|
|
25 |
import wsic # noqa: E402 |
|
|
26 |
|
|
|
27 |
# -- General configuration --------------------------------------------- |
|
|
28 |
|
|
|
29 |
# If your documentation needs a minimal Sphinx version, state it here. |
|
|
30 |
# |
|
|
31 |
# needs_sphinx = '1.0' |
|
|
32 |
|
|
|
33 |
# Add any Sphinx extension module names here, as strings. They can be |
|
|
34 |
# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom ones. |
|
|
35 |
extensions = [ |
|
|
36 |
"sphinx.ext.autodoc", |
|
|
37 |
"sphinx.ext.viewcode", |
|
|
38 |
"sphinx.ext.napoleon", |
|
|
39 |
"sphinx.ext.autosummary", |
|
|
40 |
"sphinx.ext.intersphinx", |
|
|
41 |
"myst_parser", |
|
|
42 |
] |
|
|
43 |
|
|
|
44 |
# Add any paths that contain templates here, relative to this directory. |
|
|
45 |
templates_path = ["_templates"] |
|
|
46 |
|
|
|
47 |
# The suffix(es) of source filenames. |
|
|
48 |
# You can specify multiple suffix as a list of string: |
|
|
49 |
# |
|
|
50 |
# source_suffix = ['.rst', '.md'] |
|
|
51 |
source_suffix = ".rst" |
|
|
52 |
|
|
|
53 |
# The master toctree document. |
|
|
54 |
master_doc = "index" |
|
|
55 |
|
|
|
56 |
# General information about the project. |
|
|
57 |
project = "wsic" |
|
|
58 |
copyright = "2022, John Pocock" # noqa: A001 |
|
|
59 |
author = "John Pocock" |
|
|
60 |
|
|
|
61 |
# The version info for the project you're documenting, acts as replacement |
|
|
62 |
# for |version| and |release|, also used in various other places throughout |
|
|
63 |
# the built documents. |
|
|
64 |
# |
|
|
65 |
# The short X.Y version. |
|
|
66 |
version = wsic.__version__ |
|
|
67 |
# The full version, including alpha/beta/rc tags. |
|
|
68 |
release = wsic.__version__ |
|
|
69 |
|
|
|
70 |
# The language for content autogenerated by Sphinx. Refer to documentation |
|
|
71 |
# for a list of supported languages. |
|
|
72 |
# |
|
|
73 |
# This is also used if you do content translation via gettext catalogs. |
|
|
74 |
# Usually you set "language" from the command line for these cases. |
|
|
75 |
language = "en" |
|
|
76 |
|
|
|
77 |
# List of patterns, relative to source directory, that match files and |
|
|
78 |
# directories to ignore when looking for source files. |
|
|
79 |
# This patterns also effect to html_static_path and html_extra_path |
|
|
80 |
exclude_patterns = ["_build", "Thumbs.db", ".DS_Store"] |
|
|
81 |
|
|
|
82 |
# The name of the Pygments (syntax highlighting) style to use. |
|
|
83 |
pygments_style = "sphinx" |
|
|
84 |
|
|
|
85 |
# If true, `todo` and `todoList` produce output, else they produce nothing. |
|
|
86 |
todo_include_todos = False |
|
|
87 |
|
|
|
88 |
|
|
|
89 |
# -- Options for HTML output ------------------------------------------- |
|
|
90 |
|
|
|
91 |
# The theme to use for HTML and HTML Help pages. See the documentation for |
|
|
92 |
# a list of builtin themes. |
|
|
93 |
# |
|
|
94 |
html_theme = "alabaster" |
|
|
95 |
|
|
|
96 |
# Theme options are theme-specific and customize the look and feel of a |
|
|
97 |
# theme further. For a list of options available for each theme, see the |
|
|
98 |
# documentation. |
|
|
99 |
# |
|
|
100 |
# html_theme_options = {} |
|
|
101 |
|
|
|
102 |
# Add any paths that contain custom static files (such as style sheets) here, |
|
|
103 |
# relative to this directory. They are copied after the builtin static files, |
|
|
104 |
# so a file named "default.css" will overwrite the builtin "default.css". |
|
|
105 |
html_static_path = ["_static"] |
|
|
106 |
|
|
|
107 |
|
|
|
108 |
# -- Options for HTMLHelp output --------------------------------------- |
|
|
109 |
|
|
|
110 |
# Output file base name for HTML help builder. |
|
|
111 |
htmlhelp_basename = "wsicdoc" |
|
|
112 |
|
|
|
113 |
|
|
|
114 |
# -- Options for LaTeX output ------------------------------------------ |
|
|
115 |
|
|
|
116 |
latex_elements = { |
|
|
117 |
# The paper size ('letterpaper' or 'a4paper'). |
|
|
118 |
# |
|
|
119 |
# 'papersize': 'letterpaper', |
|
|
120 |
# The font size ('10pt', '11pt' or '12pt'). |
|
|
121 |
# |
|
|
122 |
# 'pointsize': '10pt', |
|
|
123 |
# Additional stuff for the LaTeX preamble. |
|
|
124 |
# |
|
|
125 |
# 'preamble': '', |
|
|
126 |
# Latex figure (float) alignment |
|
|
127 |
# |
|
|
128 |
# 'figure_align': 'htbp', |
|
|
129 |
} |
|
|
130 |
|
|
|
131 |
# Grouping the document tree into LaTeX files. List of tuples |
|
|
132 |
# (source start file, target name, title, author, documentclass |
|
|
133 |
# [howto, manual, or own class]). |
|
|
134 |
latex_documents = [ |
|
|
135 |
(master_doc, "wsic.tex", "wsic Documentation", "John Pocock", "manual"), |
|
|
136 |
] |
|
|
137 |
|
|
|
138 |
|
|
|
139 |
# -- Options for manual page output ------------------------------------ |
|
|
140 |
|
|
|
141 |
# One entry per manual page. List of tuples |
|
|
142 |
# (source start file, name, description, authors, manual section). |
|
|
143 |
man_pages = [(master_doc, "wsic", "wsic Documentation", [author], 1)] |
|
|
144 |
|
|
|
145 |
|
|
|
146 |
# -- Options for Texinfo output ---------------------------------------- |
|
|
147 |
|
|
|
148 |
# Grouping the document tree into Texinfo files. List of tuples |
|
|
149 |
# (source start file, target name, title, author, |
|
|
150 |
# dir menu entry, description, category) |
|
|
151 |
texinfo_documents = [ |
|
|
152 |
( |
|
|
153 |
master_doc, |
|
|
154 |
"wsic", |
|
|
155 |
"wsic Documentation", |
|
|
156 |
author, |
|
|
157 |
"wsic", |
|
|
158 |
"Whole Slide Image (WSI) conversion for brightfield histology images.", |
|
|
159 |
"Miscellaneous", |
|
|
160 |
), |
|
|
161 |
] |
|
|
162 |
|
|
|
163 |
# -- Options for autodoc ----------------------------------------------- |
|
|
164 |
|
|
|
165 |
autodoc_typehints = "description" |