<!DOCTYPE html>
<html lang="en">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<meta charset="utf-8">
<meta http-equiv="X-UA-Compatible" content="IE=edge">
<meta name="viewport" content="width=device-width, initial-scale=1">
<meta name="description" content="">
<meta name="author" content="">
<link rel="shortcut icon" href="https://igv.org/web/img/favicon.ico">
<title>Integrative Genomics Viewer</title>
<!-- IGV JS -->
<script src="https://igv.org/web/release/2.1.0/dist/igv.min.js"></script>
</head>
<body>
<div id="igv-div" style="padding-top: 10px;padding-bottom: 10px; border:1px solid lightgray"></div>
<script type="text/javascript">
document.addEventListener("DOMContentLoaded", function () {
var options =
{
locus: "{{ locus }}",
genome: "{{ genome }}",
{% if reference %}
reference: {
id: "{{ reference.id }}",
fastaURL: "{{ reference.fastaURL }}",
indexURL: "{{ reference.indexURL }}",
cytobandURL: "{{ reference.cytobandURL }}"
},
{% endif %}
{% for track in tracks %}
{% if loop.first %}
tracks: [
{% endif %}
{
type: '{{ track.type }}',
format: '{{ track.format }}',
url: '{{ track.url }}',
{% if 'indexURL' in track %}
indexURL: '{{ track.indexURL }}',
{% endif %}
name: '{{ track.name }}'
}
{% if not loop.last %},{% else %}]{% endif %}
{% endfor %}
};
var igvDiv = document.getElementById("igv-div");
igv.createBrowser(igvDiv, options)
.then(function (browser) {
console.log("Created IGV browser");
})
});
</script>
</body>
</html>
Datasets
Models
