--- a +++ b/code/6_visualize.py @@ -0,0 +1,26 @@ +import config +from utils_evaluation import visualize + +# Visualizing patch predictions with overlaid dots. +print("\n\n+++++ Running 6_visualize.py +++++") +print("\n----- Visualizing validation set -----") +# Visualize validation set. +visualize(wsi_folder=config.args.wsi_val, + preds_folder=config.args.preds_val, + vis_folder=config.args.vis_val, + classes=config.classes, + colors=config.colors, + num_classes=config.num_classes, + patch_size=config.args.patch_size) +print("----- Finished visualizing validation set -----\n") +print("----- Visualizing test set -----") +# Visualize test set. +visualize(wsi_folder=config.args.wsi_test, + preds_folder=config.args.preds_test, + vis_folder=config.args.vis_test, + classes=config.classes, + colors=config.colors, + num_classes=config.num_classes, + patch_size=config.args.patch_size) +print("----- Finished visualizing test set -----\n") +print("+++++ Finished running 6_visualize.py +++++\n\n")