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"Date": "2020-05-01",
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"Title": "Solvers for Large-Scale Eigenvalue and SVD Problems",
"Date": "2024-07-18",
"Authors@R": "c( person(\"Yixuan\", \"Qiu\", , \"yixuan.qiu@cos.name\", c(\"aut\", \"cre\")), person(\"Jiali\", \"Mei\", , \"vermouthmjl@gmail.com\", \"aut\", comment = \"Function interface of matrix operation\"), person(\"Gael\", \"Guennebaud\", , \"gael.guennebaud@inria.fr\", \"ctb\", comment = \"Eigenvalue solvers from the 'Eigen' library\"), person(\"Jitse\", \"Niesen\", , \"jitse@maths.leeds.ac.uk\", \"ctb\", comment = \"Eigenvalue solvers from the 'Eigen' library\") )",
"Description": "R interface to the 'Spectra' library <https://spectralib.org/> for large-scale eigenvalue and SVD problems. It is typically used to compute a few eigenvalues/vectors of an n by n matrix, e.g., the k largest eigenvalues, which is usually more efficient than eigen() if k << n. This package provides the 'eigs()' function that does the similar job as in 'Matlab', 'Octave', 'Python SciPy' and 'Julia'. It also provides the 'svds()' function to calculate the largest k singular values and corresponding singular vectors of a real matrix. The matrix to be computed on can be dense, sparse, or in the form of an operator defined by the user.",
"License": "MPL (>= 2)",
"URL": "https://github.com/yixuan/RSpectra",
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"Title": "Seamless R and C++ Integration",
"Date": "2025-01-11",
"Authors@R": "c(person(\"Dirk\", \"Eddelbuettel\", role = c(\"aut\", \"cre\"), email = \"edd@debian.org\", comment = c(ORCID = \"0000-0001-6419-907X\")), person(\"Romain\", \"Francois\", role = \"aut\", comment = c(ORCID = \"0000-0002-2444-4226\")), person(\"JJ\", \"Allaire\", role = \"aut\", comment = c(ORCID = \"0000-0003-0174-9868\")), person(\"Kevin\", \"Ushey\", role = \"aut\", comment = c(ORCID = \"0000-0003-2880-7407\")), person(\"Qiang\", \"Kou\", role = \"aut\", comment = c(ORCID = \"0000-0001-6786-5453\")), person(\"Nathan\", \"Russell\", role = \"aut\"), person(\"Iñaki\", \"Ucar\", role = \"aut\", comment = c(ORCID = \"0000-0001-6403-5550\")), person(\"Doug\", \"Bates\", role = \"aut\", comment = c(ORCID = \"0000-0001-8316-9503\")), person(\"John\", \"Chambers\", role = \"aut\"))",
"Description": "The 'Rcpp' package provides R functions as well as C++ classes which offer a seamless integration of R and C++. Many R data types and objects can be mapped back and forth to C++ equivalents which facilitates both writing of new code as well as easier integration of third-party libraries. Documentation about 'Rcpp' is provided by several vignettes included in this package, via the 'Rcpp Gallery' site at <https://gallery.rcpp.org>, the paper by Eddelbuettel and Francois (2011, <doi:10.18637/jss.v040.i08>), the book by Eddelbuettel (2013, <doi:10.1007/978-1-4614-6868-4>) and the paper by Eddelbuettel and Balamuta (2018, <doi:10.1080/00031305.2017.1375990>); see 'citation(\"Rcpp\")' for details.",
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],
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],
"URL": "https://www.rcpp.org, https://dirk.eddelbuettel.com/code/rcpp.html, https://github.com/RcppCore/Rcpp",
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"Author": "Dirk Eddelbuettel [aut, cre] (<https://orcid.org/0000-0001-6419-907X>), Romain Francois [aut] (<https://orcid.org/0000-0002-2444-4226>), JJ Allaire [aut] (<https://orcid.org/0000-0003-0174-9868>), Kevin Ushey [aut] (<https://orcid.org/0000-0003-2880-7407>), Qiang Kou [aut] (<https://orcid.org/0000-0001-6786-5453>), Nathan Russell [aut], Iñaki Ucar [aut] (<https://orcid.org/0000-0001-6403-5550>), Doug Bates [aut] (<https://orcid.org/0000-0001-8316-9503>), John Chambers [aut]",
"Maintainer": "Dirk Eddelbuettel <edd@debian.org>",
"Repository": "CRAN"
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"Version": "0.0.22",
"Source": "Repository",
"Type": "Package",
"Title": "'Rcpp' Bindings for 'Annoy', a Library for Approximate Nearest Neighbors",
"Date": "2024-01-23",
"Author": "Dirk Eddelbuettel",
"Maintainer": "Dirk Eddelbuettel <edd@debian.org>",
"Description": "'Annoy' is a small C++ library for Approximate Nearest Neighbors written for efficient memory usage as well an ability to load from / save to disk. This package provides an R interface by relying on the 'Rcpp' package, exposing the same interface as the original Python wrapper to 'Annoy'. See <https://github.com/spotify/annoy> for more on 'Annoy'. 'Annoy' is released under Version 2.0 of the Apache License. Also included is a small Windows port of 'mmap' which is released under the MIT license.",
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],
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],
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],
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],
"URL": "https://github.com/eddelbuettel/rcppannoy, https://dirk.eddelbuettel.com/code/rcpp.annoy.html",
"BugReports": "https://github.com/eddelbuettel/rcppannoy/issues",
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"Version": "14.2.3-1",
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"Title": "'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra Library",
"Date": "2025-02-05",
"Authors@R": "c(person(\"Dirk\", \"Eddelbuettel\", role = c(\"aut\", \"cre\"), email = \"edd@debian.org\", comment = c(ORCID = \"0000-0001-6419-907X\")), person(\"Romain\", \"Francois\", role = \"aut\", comment = c(ORCID = \"0000-0002-2444-4226\")), person(\"Doug\", \"Bates\", role = \"aut\", comment = c(ORCID = \"0000-0001-8316-9503\")), person(\"Binxiang\", \"Ni\", role = \"aut\"), person(\"Conrad\", \"Sanderson\", role = \"aut\", comment = c(ORCID = \"0000-0002-0049-4501\")))",
"Description": "'Armadillo' is a templated C++ linear algebra library (by Conrad Sanderson) that aims towards a good balance between speed and ease of use. Integer, floating point and complex numbers are supported, as well as a subset of trigonometric and statistics functions. Various matrix decompositions are provided through optional integration with LAPACK and ATLAS libraries. The 'RcppArmadillo' package includes the header files from the templated 'Armadillo' library. Thus users do not need to install 'Armadillo' itself in order to use 'RcppArmadillo'. From release 7.800.0 on, 'Armadillo' is licensed under Apache License 2; previous releases were under licensed as MPL 2.0 from version 3.800.0 onwards and LGPL-3 prior to that; 'RcppArmadillo' (the 'Rcpp' bindings/bridge to Armadillo) is licensed under the GNU GPL version 2 or later, as is the rest of 'Rcpp'.",
"License": "GPL (>= 2)",
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],
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],
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"URL": "https://github.com/RcppCore/RcppArmadillo, https://dirk.eddelbuettel.com/code/rcpp.armadillo.html",
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"Author": "Dirk Eddelbuettel [aut, cre] (<https://orcid.org/0000-0001-6419-907X>), Romain Francois [aut] (<https://orcid.org/0000-0002-2444-4226>), Doug Bates [aut] (<https://orcid.org/0000-0001-8316-9503>), Binxiang Ni [aut], Conrad Sanderson [aut] (<https://orcid.org/0000-0002-0049-4501>)",
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"Version": "0.3.4.0.2",
"Source": "Repository",
"Type": "Package",
"Title": "'Rcpp' Integration for the 'Eigen' Templated Linear Algebra Library",
"Date": "2024-08-23",
"Authors@R": "c(person(\"Doug\", \"Bates\", role = \"aut\", comment = c(ORCID = \"0000-0001-8316-9503\")), person(\"Dirk\", \"Eddelbuettel\", role = c(\"aut\", \"cre\"), email = \"edd@debian.org\", comment = c(ORCID = \"0000-0001-6419-907X\")), person(\"Romain\", \"Francois\", role = \"aut\", comment = c(ORCID = \"0000-0002-2444-4226\")), person(\"Yixuan\", \"Qiu\", role = \"aut\", comment = c(ORCID = \"0000-0003-0109-6692\")), person(\"Authors of\", \"Eigen\", role = \"cph\", comment = \"Authorship and copyright in included Eigen library as detailed in inst/COPYRIGHTS\"))",
"Copyright": "See the file COPYRIGHTS for various Eigen copyright details",
"Description": "R and 'Eigen' integration using 'Rcpp'. 'Eigen' is a C++ template library for linear algebra: matrices, vectors, numerical solvers and related algorithms. It supports dense and sparse matrices on integer, floating point and complex numbers, decompositions of such matrices, and solutions of linear systems. Its performance on many algorithms is comparable with some of the best implementations based on 'Lapack' and level-3 'BLAS'. The 'RcppEigen' package includes the header files from the 'Eigen' C++ template library. Thus users do not need to install 'Eigen' itself in order to use 'RcppEigen'. Since version 3.1.1, 'Eigen' is licensed under the Mozilla Public License (version 2); earlier version were licensed under the GNU LGPL version 3 or later. 'RcppEigen' (the 'Rcpp' bindings/bridge to 'Eigen') is licensed under the GNU GPL version 2 or later, as is the rest of 'Rcpp'.",
"License": "GPL (>= 2) | file LICENSE",
"LazyLoad": "yes",
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],
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"Suggests": [
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"URL": "https://github.com/RcppCore/RcppEigen, https://dirk.eddelbuettel.com/code/rcpp.eigen.html",
"BugReports": "https://github.com/RcppCore/RcppEigen/issues",
"NeedsCompilation": "yes",
"Author": "Doug Bates [aut] (<https://orcid.org/0000-0001-8316-9503>), Dirk Eddelbuettel [aut, cre] (<https://orcid.org/0000-0001-6419-907X>), Romain Francois [aut] (<https://orcid.org/0000-0002-2444-4226>), Yixuan Qiu [aut] (<https://orcid.org/0000-0003-0109-6692>), Authors of Eigen [cph] (Authorship and copyright in included Eigen library as detailed in inst/COPYRIGHTS)",
"Maintainer": "Dirk Eddelbuettel <edd@debian.org>",
"Repository": "CRAN",
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"Version": "0.6.0",
"Source": "Repository",
"Title": "'Rcpp' Bindings for 'hnswlib', a Library for Approximate Nearest Neighbors",
"Authors@R": "c( person(\"James\", \"Melville\", , \"jlmelville@gmail.com\", role = c(\"aut\", \"cre\", \"cph\")), person(\"Aaron\", \"Lun\", role = \"ctb\"), person(\"Samuel\", \"Granjeaud\", role = \"ctb\"), person(\"Dmitriy\", \"Selivanov\", role = \"ctb\"), person(\"Yuxing\", \"Liao\", role = \"ctb\") )",
"Description": "'Hnswlib' is a C++ library for Approximate Nearest Neighbors. This package provides a minimal R interface by relying on the 'Rcpp' package. See <https://github.com/nmslib/hnswlib> for more on 'hnswlib'. 'hnswlib' is released under Version 2.0 of the Apache License.",
"License": "GPL (>= 3)",
"URL": "https://github.com/jlmelville/rcpphnsw",
"BugReports": "https://github.com/jlmelville/rcpphnsw/issues",
"Imports": [
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"Rcpp (>= 0.11.3)"
],
"Suggests": [
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],
"LinkingTo": [
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],
"Encoding": "UTF-8",
"RoxygenNote": "7.3.1",
"NeedsCompilation": "yes",
"Author": "James Melville [aut, cre, cph], Aaron Lun [ctb], Samuel Granjeaud [ctb], Dmitriy Selivanov [ctb], Yuxing Liao [ctb]",
"Maintainer": "James Melville <jlmelville@gmail.com>",
"Repository": "CRAN"
},
"RcppProgress": {
"Package": "RcppProgress",
"Version": "0.4.2",
"Source": "Repository",
"Maintainer": "Karl Forner <karl.forner@gmail.com>",
"License": "GPL (>= 3)",
"Title": "An Interruptible Progress Bar with OpenMP Support for C++ in R Packages",
"Type": "Package",
"LazyLoad": "yes",
"Author": "Karl Forner <karl.forner@gmail.com>",
"Description": "Allows to display a progress bar in the R console for long running computations taking place in c++ code, and support for interrupting those computations even in multithreaded code, typically using OpenMP.",
"URL": "https://github.com/kforner/rcpp_progress",
"BugReports": "https://github.com/kforner/rcpp_progress/issues",
"Date": "2020-02-06",
"Suggests": [
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"NeedsCompilation": "no",
"Repository": "CRAN"
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"Type": "Package",
"Title": "'Rcpp' Bindings to Parser for \"Tom's Obvious Markup Language\"",
"Date": "2023-01-29",
"Author": "Dirk Eddelbuettel",
"Maintainer": "Dirk Eddelbuettel <edd@debian.org>",
"Description": "The configuration format defined by 'TOML' (which expands to \"Tom's Obvious Markup Language\") specifies an excellent format (described at <https://toml.io/en/>) suitable for both human editing as well as the common uses of a machine-readable format. This package uses 'Rcpp' to connect to the 'toml++' parser written by Mark Gillard to R.",
"SystemRequirements": "A C++17 compiler",
"BugReports": "https://github.com/eddelbuettel/rcpptoml/issues",
"URL": "http://dirk.eddelbuettel.com/code/rcpp.toml.html",
"Imports": [
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"LinkingTo": [
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"Suggests": [
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"License": "GPL (>= 2)",
"NeedsCompilation": "yes",
"Repository": "CRAN",
"Encoding": "UTF-8"
},
"RhpcBLASctl": {
"Package": "RhpcBLASctl",
"Version": "0.23-42",
"Source": "Repository",
"Date": "2023-02-11",
"Title": "Control the Number of Threads on 'BLAS'",
"Author": "Junji NAKANO <nakanoj@ism.ac.jp> and Ei-ji Nakama <nakama@ki.rim.or.jp>",
"Maintainer": "Ei-ji Nakama <nakama@ki.rim.or.jp>",
"Description": "Control the number of threads on 'BLAS' (Aka 'GotoBLAS', 'OpenBLAS', 'ACML', 'BLIS' and 'MKL'). And possible to control the number of threads in 'OpenMP'. Get a number of logical cores and physical cores if feasible.",
"License": "AGPL-3",
"URL": "https://prs.ism.ac.jp/~nakama/Rhpc/",
"ByteCompile": "true",
"NeedsCompilation": "yes",
"Repository": "CRAN",
"Encoding": "UTF-8"
},
"Rtsne": {
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"Version": "0.17",
"Source": "Repository",
"Type": "Package",
"Title": "T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation",
"Authors@R": "c( person(\"Jesse\", \"Krijthe\", ,\"jkrijthe@gmail.com\", role = c(\"aut\", \"cre\")), person(\"Laurens\", \"van der Maaten\", role = c(\"cph\"), comment = \"Author of original C++ code\") )",
"Description": "An R wrapper around the fast T-distributed Stochastic Neighbor Embedding implementation by Van der Maaten (see <https://github.com/lvdmaaten/bhtsne/> for more information on the original implementation).",
"License": "file LICENSE",
"URL": "https://github.com/jkrijthe/Rtsne",
"Encoding": "UTF-8",
"Imports": [
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"Suggests": [
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"RoxygenNote": "7.2.3",
"NeedsCompilation": "yes",
"Author": "Jesse Krijthe [aut, cre], Laurens van der Maaten [cph] (Author of original C++ code)",
"Maintainer": "Jesse Krijthe <jkrijthe@gmail.com>",
"License_is_FOSS": "yes",
"Repository": "CRAN"
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"Package": "S4Arrays",
"Version": "1.6.0",
"Source": "Bioconductor",
"Title": "Foundation of array-like containers in Bioconductor",
"Description": "The S4Arrays package defines the Array virtual class to be extended by other S4 classes that wish to implement a container with an array-like semantic. It also provides: (1) low-level functionality meant to help the developer of such container to implement basic operations like display, subsetting, or coercion of their array-like objects to an ordinary matrix or array, and (2) a framework that facilitates block processing of array-like objects (typically on-disk objects).",
"biocViews": "Infrastructure, DataRepresentation",
"URL": "https://bioconductor.org/packages/S4Arrays",
"BugReports": "https://github.com/Bioconductor/S4Arrays/issues",
"License": "Artistic-2.0",
"Encoding": "UTF-8",
"Authors@R": "c( person(\"Hervé\", \"Pagès\", role=c(\"aut\", \"cre\"), email=\"hpages.on.github@gmail.com\"), person(\"Jacques\", \"Serizay\", role=\"ctb\"))",
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"Matrix",
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"BiocGenerics (>= 0.45.2)",
"S4Vectors",
"IRanges"
],
"Imports": [
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"crayon"
],
"LinkingTo": [
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],
"Suggests": [
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"SparseArray (>= 0.0.4)",
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"VignetteBuilder": "knitr",
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"git_url": "https://git.bioconductor.org/packages/S4Arrays",
"git_branch": "RELEASE_3_20",
"git_last_commit": "e100af0",
"git_last_commit_date": "2024-10-29",
"Repository": "Bioconductor 3.20",
"NeedsCompilation": "yes",
"Author": "Hervé Pagès [aut, cre], Jacques Serizay [ctb]",
"Maintainer": "Hervé Pagès <hpages.on.github@gmail.com>"
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"Version": "0.44.0",
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"Title": "Foundation of vector-like and list-like containers in Bioconductor",
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"GenomicRanges",
"SummarizedExperiment",
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"git_branch": "RELEASE_3_20",
"git_last_commit": "79c3948",
"git_last_commit_date": "2024-10-29",
"Repository": "Bioconductor 3.20",
"NeedsCompilation": "yes",
"Author": "Hervé Pagès [aut, cre], Michael Lawrence [aut], Patrick Aboyoun [aut], Aaron Lun [ctb], Beryl Kanali [ctb] (Converted vignettes from Sweave to RMarkdown)",
"Maintainer": "Hervé Pagès <hpages.on.github@gmail.com>"
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"Seurat": {
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"Version": "5.2.1",
"Source": "Repository",
"Title": "Tools for Single Cell Genomics",
"Description": "A toolkit for quality control, analysis, and exploration of single cell RNA sequencing data. 'Seurat' aims to enable users to identify and interpret sources of heterogeneity from single cell transcriptomic measurements, and to integrate diverse types of single cell data. See Satija R, Farrell J, Gennert D, et al (2015) <doi:10.1038/nbt.3192>, Macosko E, Basu A, Satija R, et al (2015) <doi:10.1016/j.cell.2015.05.002>, Stuart T, Butler A, et al (2019) <doi:10.1016/j.cell.2019.05.031>, and Hao, Hao, et al (2020) <doi:10.1101/2020.10.12.335331> for more details.",
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"License": "MIT + file LICENSE",
"URL": "https://satijalab.org/seurat, https://github.com/satijalab/seurat",
"BugReports": "https://github.com/satijalab/seurat/issues",
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"Maintainer": "Rahul Satija <seurat@nygenome.org>",
"Repository": "CRAN"
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"Version": "5.0.2",
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"Title": "Data Structures for Single Cell Data",
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"Description": "Defines S4 classes for single-cell genomic data and associated information, such as dimensionality reduction embeddings, nearest-neighbor graphs, and spatially-resolved coordinates. Provides data access methods and R-native hooks to ensure the Seurat object is familiar to other R users. See Satija R, Farrell J, Gennert D, et al (2015) <doi:10.1038/nbt.3192>, Macosko E, Basu A, Satija R, et al (2015) <doi:10.1016/j.cell.2015.05.002>, and Stuart T, Butler A, et al (2019) <doi:10.1016/j.cell.2019.05.031>, Hao Y, Hao S, et al (2021) <doi:10.1016/j.cell.2021.04.048> and Hao Y, et al (2023) <doi:10.1101/2022.02.24.481684> for more details.",
"URL": "https://satijalab.github.io/seurat-object/, https://github.com/satijalab/seurat-object",
"BugReports": "https://github.com/satijalab/seurat-object/issues",
"License": "MIT + file LICENSE",
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"Author": "Paul Hoffman [aut] (<https://orcid.org/0000-0002-7693-8957>), Rahul Satija [aut, cre] (<https://orcid.org/0000-0001-9448-8833>), David Collins [aut] (<https://orcid.org/0000-0001-9243-7821>), Yuhan Hao [aut] (<https://orcid.org/0000-0002-1810-0822>), Austin Hartman [aut] (<https://orcid.org/0000-0001-7278-1852>), Gesmira Molla [aut] (<https://orcid.org/0000-0002-8628-5056>), Andrew Butler [aut] (<https://orcid.org/0000-0003-3608-0463>), Tim Stuart [aut] (<https://orcid.org/0000-0002-3044-0897>), Madeline Kowalski [ctb] (<https://orcid.org/0000-0002-5655-7620>), Saket Choudhary [ctb] (<https://orcid.org/0000-0001-5202-7633>), Skylar Li [ctb], Longda Jiang [ctb] (<https://orcid.org/0000-0003-4964-6497>), Jeff Farrell [ctb], Shiwei Zheng [ctb] (<https://orcid.org/0000-0001-6682-6743>), Christoph Hafemeister [ctb] (<https://orcid.org/0000-0001-6365-8254>), Patrick Roelli [ctb]",
"Maintainer": "Rahul Satija <seurat@nygenome.org>",
"Repository": "CRAN"
},
"SingleCellExperiment": {
"Package": "SingleCellExperiment",
"Version": "1.28.1",
"Source": "Bioconductor",
"Date": "2024-11-08",
"Title": "S4 Classes for Single Cell Data",
"Authors@R": "c( person(\"Aaron\", \"Lun\", role=c(\"aut\", \"cph\"), email=\"infinite.monkeys.with.keyboards@gmail.com\"), person(\"Davide\",\"Risso\", role=c(\"aut\",\"cre\", \"cph\"), email=\"risso.davide@gmail.com\"), person(\"Keegan\", \"Korthauer\", role=\"ctb\"), person(\"Kevin\", \"Rue-Albrecht\", role=\"ctb\"), person(\"Luke\", \"Zappia\", role = \"ctb\", comment = c(ORCID = \"0000-0001-7744-8565\", github = \"lazappi\")))",
"Depends": [
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"Description": "Defines a S4 class for storing data from single-cell experiments. This includes specialized methods to store and retrieve spike-in information, dimensionality reduction coordinates and size factors for each cell, along with the usual metadata for genes and libraries.",
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"NeedsCompilation": "no",
"Author": "Aaron Lun [aut, cph], Davide Risso [aut, cre, cph], Keegan Korthauer [ctb], Kevin Rue-Albrecht [ctb], Luke Zappia [ctb] (<https://orcid.org/0000-0001-7744-8565>, lazappi)",
"Maintainer": "Davide Risso <risso.davide@gmail.com>"
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"Version": "1.6.2",
"Source": "Bioconductor",
"Title": "High-performance sparse data representation and manipulation in R",
"Description": "The SparseArray package provides array-like containers for efficient in-memory representation of multidimensional sparse data in R (arrays and matrices). The package defines the SparseArray virtual class and two concrete subclasses: COO_SparseArray and SVT_SparseArray. Each subclass uses its own internal representation of the nonzero multidimensional data: the \"COO layout\" and the \"SVT layout\", respectively. SVT_SparseArray objects mimic as much as possible the behavior of ordinary matrix and array objects in base R. In particular, they suppport most of the \"standard matrix and array API\" defined in base R and in the matrixStats package from CRAN.",
"biocViews": "Infrastructure, DataRepresentation",
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"License": "Artistic-2.0",
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"git_branch": "RELEASE_3_20",
"git_last_commit": "89a7e4b",
"git_last_commit_date": "2025-02-18",
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"Author": "Hervé Pagès [aut, cre] (<https://orcid.org/0009-0002-8272-4522>), Vince Carey [fnd] (<https://orcid.org/0000-0003-4046-0063>), Rafael A. Irizarry [fnd] (<https://orcid.org/0000-0002-3944-4309>), Jacques Serizay [ctb] (<https://orcid.org/0000-0002-4295-0624>)",
"Maintainer": "Hervé Pagès <hpages.on.github@gmail.com>"
},
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"Title": "A container (S4 class) for matrix-like assays",
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"testthat (>= 3.2.0)",
"withr (>= 2.3.0)"
],
"Config/Needs/website": "r-lib/asciicast, glue, htmlwidgets, igraph, tibble, tidyverse/tidytemplate",
"Config/testthat/edition": "3",
"Encoding": "UTF-8",
"Language": "en-US",
"RoxygenNote": "7.3.1.9000",
"NeedsCompilation": "no",
"Author": "Gábor Csárdi [aut, cre, cph] (<https://orcid.org/0000-0001-7098-9676>), Winston Chang [aut], Posit Software, PBC [cph, fnd], Ascent Digital Services [cph, fnd]",
"Maintainer": "Gábor Csárdi <csardi.gabor@gmail.com>",
"Repository": "CRAN"
},
"cellranger": {
"Package": "cellranger",
"Version": "1.1.0",
"Source": "Repository",
"Title": "Translate Spreadsheet Cell Ranges to Rows and Columns",
"Authors@R": "c( person(\"Jennifer\", \"Bryan\", , \"jenny@stat.ubc.ca\", c(\"cre\", \"aut\")), person(\"Hadley\", \"Wickham\", , \"hadley@rstudio.com\", \"ctb\") )",
"Description": "Helper functions to work with spreadsheets and the \"A1:D10\" style of cell range specification.",
"Depends": [
"R (>= 3.0.0)"
],
"License": "MIT + file LICENSE",
"LazyData": "true",
"URL": "https://github.com/rsheets/cellranger",
"BugReports": "https://github.com/rsheets/cellranger/issues",
"Suggests": [
"covr",
"testthat (>= 1.0.0)",
"knitr",
"rmarkdown"
],
"RoxygenNote": "5.0.1.9000",
"VignetteBuilder": "knitr",
"Imports": [
"rematch",
"tibble"
],
"NeedsCompilation": "no",
"Author": "Jennifer Bryan [cre, aut], Hadley Wickham [ctb]",
"Maintainer": "Jennifer Bryan <jenny@stat.ubc.ca>",
"Repository": "CRAN",
"Encoding": "UTF-8"
},
"cli": {
"Package": "cli",
"Version": "3.6.4",
"Source": "Repository",
"Title": "Helpers for Developing Command Line Interfaces",
"Authors@R": "c( person(\"Gábor\", \"Csárdi\", , \"gabor@posit.co\", role = c(\"aut\", \"cre\")), person(\"Hadley\", \"Wickham\", role = \"ctb\"), person(\"Kirill\", \"Müller\", role = \"ctb\"), person(\"Salim\", \"Brüggemann\", , \"salim-b@pm.me\", role = \"ctb\", comment = c(ORCID = \"0000-0002-5329-5987\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "A suite of tools to build attractive command line interfaces ('CLIs'), from semantic elements: headings, lists, alerts, paragraphs, etc. Supports custom themes via a 'CSS'-like language. It also contains a number of lower level 'CLI' elements: rules, boxes, trees, and 'Unicode' symbols with 'ASCII' alternatives. It support ANSI colors and text styles as well.",
"License": "MIT + file LICENSE",
"URL": "https://cli.r-lib.org, https://github.com/r-lib/cli",
"BugReports": "https://github.com/r-lib/cli/issues",
"Depends": [
"R (>= 3.4)"
],
"Imports": [
"utils"
],
"Suggests": [
"callr",
"covr",
"crayon",
"digest",
"glue (>= 1.6.0)",
"grDevices",
"htmltools",
"htmlwidgets",
"knitr",
"methods",
"processx",
"ps (>= 1.3.4.9000)",
"rlang (>= 1.0.2.9003)",
"rmarkdown",
"rprojroot",
"rstudioapi",
"testthat (>= 3.2.0)",
"tibble",
"whoami",
"withr"
],
"Config/Needs/website": "r-lib/asciicast, bench, brio, cpp11, decor, desc, fansi, prettyunits, sessioninfo, tidyverse/tidytemplate, usethis, vctrs",
"Config/testthat/edition": "3",
"Encoding": "UTF-8",
"RoxygenNote": "7.3.2",
"NeedsCompilation": "yes",
"Author": "Gábor Csárdi [aut, cre], Hadley Wickham [ctb], Kirill Müller [ctb], Salim Brüggemann [ctb] (<https://orcid.org/0000-0002-5329-5987>), Posit Software, PBC [cph, fnd]",
"Maintainer": "Gábor Csárdi <gabor@posit.co>",
"Repository": "CRAN"
},
"clipr": {
"Package": "clipr",
"Version": "0.8.0",
"Source": "Repository",
"Type": "Package",
"Title": "Read and Write from the System Clipboard",
"Authors@R": "c( person(\"Matthew\", \"Lincoln\", , \"matthew.d.lincoln@gmail.com\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-4387-3384\")), person(\"Louis\", \"Maddox\", role = \"ctb\"), person(\"Steve\", \"Simpson\", role = \"ctb\"), person(\"Jennifer\", \"Bryan\", role = \"ctb\") )",
"Description": "Simple utility functions to read from and write to the Windows, OS X, and X11 clipboards.",
"License": "GPL-3",
"URL": "https://github.com/mdlincoln/clipr, http://matthewlincoln.net/clipr/",
"BugReports": "https://github.com/mdlincoln/clipr/issues",
"Imports": [
"utils"
],
"Suggests": [
"covr",
"knitr",
"rmarkdown",
"rstudioapi (>= 0.5)",
"testthat (>= 2.0.0)"
],
"VignetteBuilder": "knitr",
"Encoding": "UTF-8",
"Language": "en-US",
"RoxygenNote": "7.1.2",
"SystemRequirements": "xclip (https://github.com/astrand/xclip) or xsel (http://www.vergenet.net/~conrad/software/xsel/) for accessing the X11 clipboard, or wl-clipboard (https://github.com/bugaevc/wl-clipboard) for systems using Wayland.",
"NeedsCompilation": "no",
"Author": "Matthew Lincoln [aut, cre] (<https://orcid.org/0000-0002-4387-3384>), Louis Maddox [ctb], Steve Simpson [ctb], Jennifer Bryan [ctb]",
"Maintainer": "Matthew Lincoln <matthew.d.lincoln@gmail.com>",
"Repository": "CRAN"
},
"cluster": {
"Package": "cluster",
"Version": "2.1.8",
"Source": "Repository",
"VersionNote": "Last CRAN: 2.1.7 on 2024-12-06; 2.1.6 on 2023-11-30; 2.1.5 on 2023-11-27",
"Date": "2024-12-10",
"Priority": "recommended",
"Title": "\"Finding Groups in Data\": Cluster Analysis Extended Rousseeuw et al.",
"Description": "Methods for Cluster analysis. Much extended the original from Peter Rousseeuw, Anja Struyf and Mia Hubert, based on Kaufman and Rousseeuw (1990) \"Finding Groups in Data\".",
"Maintainer": "Martin Maechler <maechler@stat.math.ethz.ch>",
"Authors@R": "c(person(\"Martin\",\"Maechler\", role = c(\"aut\",\"cre\"), email=\"maechler@stat.math.ethz.ch\", comment = c(ORCID = \"0000-0002-8685-9910\")) ,person(\"Peter\", \"Rousseeuw\", role=\"aut\", email=\"peter.rousseeuw@kuleuven.be\", comment = c(\"Fortran original\", ORCID = \"0000-0002-3807-5353\")) ,person(\"Anja\", \"Struyf\", role=\"aut\", comment= \"S original\") ,person(\"Mia\", \"Hubert\", role=\"aut\", email= \"Mia.Hubert@uia.ua.ac.be\", comment = c(\"S original\", ORCID = \"0000-0001-6398-4850\")) ,person(\"Kurt\", \"Hornik\", role=c(\"trl\", \"ctb\"), email=\"Kurt.Hornik@R-project.org\", comment=c(\"port to R; maintenance(1999-2000)\", ORCID=\"0000-0003-4198-9911\")) ,person(\"Matthias\", \"Studer\", role=\"ctb\") ,person(\"Pierre\", \"Roudier\", role=\"ctb\") ,person(\"Juan\", \"Gonzalez\", role=\"ctb\") ,person(\"Kamil\", \"Kozlowski\", role=\"ctb\") ,person(\"Erich\", \"Schubert\", role=\"ctb\", comment = c(\"fastpam options for pam()\", ORCID = \"0000-0001-9143-4880\")) ,person(\"Keefe\", \"Murphy\", role=\"ctb\", comment = \"volume.ellipsoid({d >= 3})\") #not yet ,person(\"Fischer-Rasmussen\", \"Kasper\", role = \"ctb\", comment = \"Gower distance for CLARA\") )",
"Depends": [
"R (>= 3.5.0)"
],
"Imports": [
"graphics",
"grDevices",
"stats",
"utils"
],
"Suggests": [
"MASS",
"Matrix"
],
"SuggestsNote": "MASS: two examples using cov.rob() and mvrnorm(); Matrix tools for testing",
"Enhances": [
"mvoutlier",
"fpc",
"ellipse",
"sfsmisc"
],
"EnhancesNote": "xref-ed in man/*.Rd",
"LazyLoad": "yes",
"LazyData": "yes",
"ByteCompile": "yes",
"BuildResaveData": "no",
"License": "GPL (>= 2)",
"URL": "https://svn.r-project.org/R-packages/trunk/cluster/",
"NeedsCompilation": "yes",
"Author": "Martin Maechler [aut, cre] (<https://orcid.org/0000-0002-8685-9910>), Peter Rousseeuw [aut] (Fortran original, <https://orcid.org/0000-0002-3807-5353>), Anja Struyf [aut] (S original), Mia Hubert [aut] (S original, <https://orcid.org/0000-0001-6398-4850>), Kurt Hornik [trl, ctb] (port to R; maintenance(1999-2000), <https://orcid.org/0000-0003-4198-9911>), Matthias Studer [ctb], Pierre Roudier [ctb], Juan Gonzalez [ctb], Kamil Kozlowski [ctb], Erich Schubert [ctb] (fastpam options for pam(), <https://orcid.org/0000-0001-9143-4880>), Keefe Murphy [ctb] (volume.ellipsoid({d >= 3}))",
"Repository": "CRAN"
},
"codetools": {
"Package": "codetools",
"Version": "0.2-20",
"Source": "Repository",
"Priority": "recommended",
"Author": "Luke Tierney <luke-tierney@uiowa.edu>",
"Description": "Code analysis tools for R.",
"Title": "Code Analysis Tools for R",
"Depends": [
"R (>= 2.1)"
],
"Maintainer": "Luke Tierney <luke-tierney@uiowa.edu>",
"URL": "https://gitlab.com/luke-tierney/codetools",
"License": "GPL",
"NeedsCompilation": "no",
"Repository": "CRAN"
},
"colorspace": {
"Package": "colorspace",
"Version": "2.1-1",
"Source": "Repository",
"Date": "2024-07-26",
"Title": "A Toolbox for Manipulating and Assessing Colors and Palettes",
"Authors@R": "c(person(given = \"Ross\", family = \"Ihaka\", role = \"aut\", email = \"ihaka@stat.auckland.ac.nz\"), person(given = \"Paul\", family = \"Murrell\", role = \"aut\", email = \"paul@stat.auckland.ac.nz\", comment = c(ORCID = \"0000-0002-3224-8858\")), person(given = \"Kurt\", family = \"Hornik\", role = \"aut\", email = \"Kurt.Hornik@R-project.org\", comment = c(ORCID = \"0000-0003-4198-9911\")), person(given = c(\"Jason\", \"C.\"), family = \"Fisher\", role = \"aut\", email = \"jfisher@usgs.gov\", comment = c(ORCID = \"0000-0001-9032-8912\")), person(given = \"Reto\", family = \"Stauffer\", role = \"aut\", email = \"Reto.Stauffer@uibk.ac.at\", comment = c(ORCID = \"0000-0002-3798-5507\")), person(given = c(\"Claus\", \"O.\"), family = \"Wilke\", role = \"aut\", email = \"wilke@austin.utexas.edu\", comment = c(ORCID = \"0000-0002-7470-9261\")), person(given = c(\"Claire\", \"D.\"), family = \"McWhite\", role = \"aut\", email = \"claire.mcwhite@utmail.utexas.edu\", comment = c(ORCID = \"0000-0001-7346-3047\")), person(given = \"Achim\", family = \"Zeileis\", role = c(\"aut\", \"cre\"), email = \"Achim.Zeileis@R-project.org\", comment = c(ORCID = \"0000-0003-0918-3766\")))",
"Description": "Carries out mapping between assorted color spaces including RGB, HSV, HLS, CIEXYZ, CIELUV, HCL (polar CIELUV), CIELAB, and polar CIELAB. Qualitative, sequential, and diverging color palettes based on HCL colors are provided along with corresponding ggplot2 color scales. Color palette choice is aided by an interactive app (with either a Tcl/Tk or a shiny graphical user interface) and shiny apps with an HCL color picker and a color vision deficiency emulator. Plotting functions for displaying and assessing palettes include color swatches, visualizations of the HCL space, and trajectories in HCL and/or RGB spectrum. Color manipulation functions include: desaturation, lightening/darkening, mixing, and simulation of color vision deficiencies (deutanomaly, protanomaly, tritanomaly). Details can be found on the project web page at <https://colorspace.R-Forge.R-project.org/> and in the accompanying scientific paper: Zeileis et al. (2020, Journal of Statistical Software, <doi:10.18637/jss.v096.i01>).",
"Depends": [
"R (>= 3.0.0)",
"methods"
],
"Imports": [
"graphics",
"grDevices",
"stats"
],
"Suggests": [
"datasets",
"utils",
"KernSmooth",
"MASS",
"kernlab",
"mvtnorm",
"vcd",
"tcltk",
"shiny",
"shinyjs",
"ggplot2",
"dplyr",
"scales",
"grid",
"png",
"jpeg",
"knitr",
"rmarkdown",
"RColorBrewer",
"rcartocolor",
"scico",
"viridis",
"wesanderson"
],
"VignetteBuilder": "knitr",
"License": "BSD_3_clause + file LICENSE",
"URL": "https://colorspace.R-Forge.R-project.org/, https://hclwizard.org/",
"BugReports": "https://colorspace.R-Forge.R-project.org/contact.html",
"LazyData": "yes",
"Encoding": "UTF-8",
"RoxygenNote": "7.3.1",
"NeedsCompilation": "yes",
"Author": "Ross Ihaka [aut], Paul Murrell [aut] (<https://orcid.org/0000-0002-3224-8858>), Kurt Hornik [aut] (<https://orcid.org/0000-0003-4198-9911>), Jason C. Fisher [aut] (<https://orcid.org/0000-0001-9032-8912>), Reto Stauffer [aut] (<https://orcid.org/0000-0002-3798-5507>), Claus O. Wilke [aut] (<https://orcid.org/0000-0002-7470-9261>), Claire D. McWhite [aut] (<https://orcid.org/0000-0001-7346-3047>), Achim Zeileis [aut, cre] (<https://orcid.org/0000-0003-0918-3766>)",
"Maintainer": "Achim Zeileis <Achim.Zeileis@R-project.org>",
"Repository": "CRAN"
},
"commonmark": {
"Package": "commonmark",
"Version": "1.9.2",
"Source": "Repository",
"Type": "Package",
"Title": "High Performance CommonMark and Github Markdown Rendering in R",
"Authors@R": "c( person(\"Jeroen\", \"Ooms\", ,\"jeroenooms@gmail.com\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-4035-0289\")), person(\"John MacFarlane\", role = \"cph\", comment = \"Author of cmark\"))",
"Description": "The CommonMark specification <https://github.github.com/gfm/> defines a rationalized version of markdown syntax. This package uses the 'cmark' reference implementation for converting markdown text into various formats including html, latex and groff man. In addition it exposes the markdown parse tree in xml format. Also includes opt-in support for GFM extensions including tables, autolinks, and strikethrough text.",
"License": "BSD_2_clause + file LICENSE",
"URL": "https://docs.ropensci.org/commonmark/ https://ropensci.r-universe.dev/commonmark",
"BugReports": "https://github.com/r-lib/commonmark/issues",
"Suggests": [
"curl",
"testthat",
"xml2"
],
"RoxygenNote": "7.2.3",
"Language": "en-US",
"Encoding": "UTF-8",
"NeedsCompilation": "yes",
"Author": "Jeroen Ooms [aut, cre] (<https://orcid.org/0000-0002-4035-0289>), John MacFarlane [cph] (Author of cmark)",
"Maintainer": "Jeroen Ooms <jeroenooms@gmail.com>",
"Repository": "CRAN"
},
"cowplot": {
"Package": "cowplot",
"Version": "1.1.3",
"Source": "Repository",
"Title": "Streamlined Plot Theme and Plot Annotations for 'ggplot2'",
"Authors@R": "person( given = \"Claus O.\", family = \"Wilke\", role = c(\"aut\", \"cre\"), email = \"wilke@austin.utexas.edu\", comment = c(ORCID = \"0000-0002-7470-9261\") )",
"Description": "Provides various features that help with creating publication-quality figures with 'ggplot2', such as a set of themes, functions to align plots and arrange them into complex compound figures, and functions that make it easy to annotate plots and or mix plots with images. The package was originally written for internal use in the Wilke lab, hence the name (Claus O. Wilke's plot package). It has also been used extensively in the book Fundamentals of Data Visualization.",
"URL": "https://wilkelab.org/cowplot/",
"BugReports": "https://github.com/wilkelab/cowplot/issues",
"Depends": [
"R (>= 3.5.0)"
],
"Imports": [
"ggplot2 (>= 3.4.0)",
"grid",
"gtable",
"grDevices",
"methods",
"rlang",
"scales"
],
"License": "GPL-2",
"Suggests": [
"Cairo",
"covr",
"dplyr",
"forcats",
"gridGraphics (>= 0.4-0)",
"knitr",
"lattice",
"magick",
"maps",
"PASWR",
"patchwork",
"rmarkdown",
"ragg",
"testthat (>= 1.0.0)",
"tidyr",
"vdiffr (>= 0.3.0)",
"VennDiagram"
],
"VignetteBuilder": "knitr",
"Collate": "'add_sub.R' 'align_plots.R' 'as_grob.R' 'as_gtable.R' 'axis_canvas.R' 'cowplot.R' 'draw.R' 'get_plot_component.R' 'get_axes.R' 'get_titles.R' 'get_legend.R' 'get_panel.R' 'gtable.R' 'key_glyph.R' 'plot_grid.R' 'save.R' 'set_null_device.R' 'setup.R' 'stamp.R' 'themes.R' 'utils_ggplot2.R'",
"RoxygenNote": "7.2.3",
"Encoding": "UTF-8",
"NeedsCompilation": "no",
"Author": "Claus O. Wilke [aut, cre] (<https://orcid.org/0000-0002-7470-9261>)",
"Maintainer": "Claus O. Wilke <wilke@austin.utexas.edu>",
"Repository": "CRAN"
},
"cpp11": {
"Package": "cpp11",
"Version": "0.5.2",
"Source": "Repository",
"Title": "A C++11 Interface for R's C Interface",
"Authors@R": "c( person(\"Davis\", \"Vaughan\", email = \"davis@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0003-4777-038X\")), person(\"Jim\",\"Hester\", role = \"aut\", comment = c(ORCID = \"0000-0002-2739-7082\")), person(\"Romain\", \"François\", role = \"aut\", comment = c(ORCID = \"0000-0002-2444-4226\")), person(\"Benjamin\", \"Kietzman\", role = \"ctb\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "Provides a header only, C++11 interface to R's C interface. Compared to other approaches 'cpp11' strives to be safe against long jumps from the C API as well as C++ exceptions, conform to normal R function semantics and supports interaction with 'ALTREP' vectors.",
"License": "MIT + file LICENSE",
"URL": "https://cpp11.r-lib.org, https://github.com/r-lib/cpp11",
"BugReports": "https://github.com/r-lib/cpp11/issues",
"Depends": [
"R (>= 4.0.0)"
],
"Suggests": [
"bench",
"brio",
"callr",
"cli",
"covr",
"decor",
"desc",
"ggplot2",
"glue",
"knitr",
"lobstr",
"mockery",
"progress",
"rmarkdown",
"scales",
"Rcpp",
"testthat (>= 3.2.0)",
"tibble",
"utils",
"vctrs",
"withr"
],
"VignetteBuilder": "knitr",
"Config/Needs/website": "tidyverse/tidytemplate",
"Config/testthat/edition": "3",
"Config/Needs/cpp11/cpp_register": "brio, cli, decor, desc, glue, tibble, vctrs",
"Encoding": "UTF-8",
"RoxygenNote": "7.3.2",
"NeedsCompilation": "no",
"Author": "Davis Vaughan [aut, cre] (<https://orcid.org/0000-0003-4777-038X>), Jim Hester [aut] (<https://orcid.org/0000-0002-2739-7082>), Romain François [aut] (<https://orcid.org/0000-0002-2444-4226>), Benjamin Kietzman [ctb], Posit Software, PBC [cph, fnd]",
"Maintainer": "Davis Vaughan <davis@posit.co>",
"Repository": "CRAN"
},
"crayon": {
"Package": "crayon",
"Version": "1.5.3",
"Source": "Repository",
"Title": "Colored Terminal Output",
"Authors@R": "c( person(\"Gábor\", \"Csárdi\", , \"csardi.gabor@gmail.com\", role = c(\"aut\", \"cre\")), person(\"Brodie\", \"Gaslam\", , \"brodie.gaslam@yahoo.com\", role = \"ctb\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "The crayon package is now superseded. Please use the 'cli' package for new projects. Colored terminal output on terminals that support 'ANSI' color and highlight codes. It also works in 'Emacs' 'ESS'. 'ANSI' color support is automatically detected. Colors and highlighting can be combined and nested. New styles can also be created easily. This package was inspired by the 'chalk' 'JavaScript' project.",
"License": "MIT + file LICENSE",
"URL": "https://r-lib.github.io/crayon/, https://github.com/r-lib/crayon",
"BugReports": "https://github.com/r-lib/crayon/issues",
"Imports": [
"grDevices",
"methods",
"utils"
],
"Suggests": [
"mockery",
"rstudioapi",
"testthat",
"withr"
],
"Config/Needs/website": "tidyverse/tidytemplate",
"Encoding": "UTF-8",
"RoxygenNote": "7.3.1",
"Collate": "'aaa-rstudio-detect.R' 'aaaa-rematch2.R' 'aab-num-ansi-colors.R' 'aac-num-ansi-colors.R' 'ansi-256.R' 'ansi-palette.R' 'combine.R' 'string.R' 'utils.R' 'crayon-package.R' 'disposable.R' 'enc-utils.R' 'has_ansi.R' 'has_color.R' 'link.R' 'styles.R' 'machinery.R' 'parts.R' 'print.R' 'style-var.R' 'show.R' 'string_operations.R'",
"NeedsCompilation": "no",
"Author": "Gábor Csárdi [aut, cre], Brodie Gaslam [ctb], Posit Software, PBC [cph, fnd]",
"Maintainer": "Gábor Csárdi <csardi.gabor@gmail.com>",
"Repository": "CRAN"
},
"credentials": {
"Package": "credentials",
"Version": "2.0.2",
"Source": "Repository",
"Type": "Package",
"Title": "Tools for Managing SSH and Git Credentials",
"Authors@R": "person(\"Jeroen\", \"Ooms\", role = c(\"aut\", \"cre\"), email = \"jeroenooms@gmail.com\", comment = c(ORCID = \"0000-0002-4035-0289\"))",
"Description": "Setup and retrieve HTTPS and SSH credentials for use with 'git' and other services. For HTTPS remotes the package interfaces the 'git-credential' utility which 'git' uses to store HTTP usernames and passwords. For SSH remotes we provide convenient functions to find or generate appropriate SSH keys. The package both helps the user to setup a local git installation, and also provides a back-end for git/ssh client libraries to authenticate with existing user credentials.",
"License": "MIT + file LICENSE",
"SystemRequirements": "git (optional)",
"Encoding": "UTF-8",
"Imports": [
"openssl (>= 1.3)",
"sys (>= 2.1)",
"curl",
"jsonlite",
"askpass"
],
"Suggests": [
"testthat",
"knitr",
"rmarkdown"
],
"RoxygenNote": "7.2.1",
"VignetteBuilder": "knitr",
"Language": "en-US",
"URL": "https://docs.ropensci.org/credentials/ https://r-lib.r-universe.dev/credentials",
"BugReports": "https://github.com/r-lib/credentials/issues",
"NeedsCompilation": "no",
"Author": "Jeroen Ooms [aut, cre] (<https://orcid.org/0000-0002-4035-0289>)",
"Maintainer": "Jeroen Ooms <jeroenooms@gmail.com>",
"Repository": "CRAN"
},
"crosstalk": {
"Package": "crosstalk",
"Version": "1.2.1",
"Source": "Repository",
"Type": "Package",
"Title": "Inter-Widget Interactivity for HTML Widgets",
"Authors@R": "c( person(\"Joe\", \"Cheng\", role = \"aut\", email = \"joe@posit.co\"), person(\"Carson\", \"Sievert\", role = c(\"aut\", \"cre\"), email = \"carson@posit.co\", comment = c(ORCID = \"0000-0002-4958-2844\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")), person(family = \"jQuery Foundation\", role = \"cph\", comment = \"jQuery library and jQuery UI library\"), person(family = \"jQuery contributors\", role = c(\"ctb\", \"cph\"), comment = \"jQuery library; authors listed in inst/www/shared/jquery-AUTHORS.txt\"), person(\"Mark\", \"Otto\", role = \"ctb\", comment = \"Bootstrap library\"), person(\"Jacob\", \"Thornton\", role = \"ctb\", comment = \"Bootstrap library\"), person(family = \"Bootstrap contributors\", role = \"ctb\", comment = \"Bootstrap library\"), person(family = \"Twitter, Inc\", role = \"cph\", comment = \"Bootstrap library\"), person(\"Brian\", \"Reavis\", role = c(\"ctb\", \"cph\"), comment = \"selectize.js library\"), person(\"Kristopher Michael\", \"Kowal\", role = c(\"ctb\", \"cph\"), comment = \"es5-shim library\"), person(family = \"es5-shim contributors\", role = c(\"ctb\", \"cph\"), comment = \"es5-shim library\"), person(\"Denis\", \"Ineshin\", role = c(\"ctb\", \"cph\"), comment = \"ion.rangeSlider library\"), person(\"Sami\", \"Samhuri\", role = c(\"ctb\", \"cph\"), comment = \"Javascript strftime library\") )",
"Description": "Provides building blocks for allowing HTML widgets to communicate with each other, with Shiny or without (i.e. static .html files). Currently supports linked brushing and filtering.",
"License": "MIT + file LICENSE",
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"Maintainer": "Carson Sievert <carson@posit.co>",
"Repository": "CRAN"
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"Description": "Bindings to 'libcurl' <https://curl.se/libcurl/> for performing fully configurable HTTP/FTP requests where responses can be processed in memory, on disk, or streaming via the callback or connection interfaces. Some knowledge of 'libcurl' is recommended; for a more-user-friendly web client see the 'httr2' package which builds on this package with http specific tools and logic.",
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"Author": "Jeroen Ooms [aut, cre] (<https://orcid.org/0000-0002-4035-0289>), Hadley Wickham [ctb], Posit Software, PBC [cph]",
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"License": "MPL-2.0 | file LICENSE",
"URL": "https://r-datatable.com, https://Rdatatable.gitlab.io/data.table, https://github.com/Rdatatable/data.table",
"BugReports": "https://github.com/Rdatatable/data.table/issues",
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"NeedsCompilation": "yes",
"Author": "Tyson Barrett [aut, cre] (<https://orcid.org/0000-0002-2137-1391>), Matt Dowle [aut], Arun Srinivasan [aut], Jan Gorecki [aut], Michael Chirico [aut] (<https://orcid.org/0000-0003-0787-087X>), Toby Hocking [aut] (<https://orcid.org/0000-0002-3146-0865>), Benjamin Schwendinger [aut] (<https://orcid.org/0000-0003-3315-8114>), Ivan Krylov [aut] (<https://orcid.org/0000-0002-0172-3812>), Pasha Stetsenko [ctb], Tom Short [ctb], Steve Lianoglou [ctb], Eduard Antonyan [ctb], Markus Bonsch [ctb], Hugh Parsonage [ctb], Scott Ritchie [ctb], Kun Ren [ctb], Xianying Tan [ctb], Rick Saporta [ctb], Otto Seiskari [ctb], Xianghui Dong [ctb], Michel Lang [ctb], Watal Iwasaki [ctb], Seth Wenchel [ctb], Karl Broman [ctb], Tobias Schmidt [ctb], David Arenburg [ctb], Ethan Smith [ctb], Francois Cocquemas [ctb], Matthieu Gomez [ctb], Philippe Chataignon [ctb], Nello Blaser [ctb], Dmitry Selivanov [ctb], Andrey Riabushenko [ctb], Cheng Lee [ctb], Declan Groves [ctb], Daniel Possenriede [ctb], Felipe Parages [ctb], Denes Toth [ctb], Mus Yaramaz-David [ctb], Ayappan Perumal [ctb], James Sams [ctb], Martin Morgan [ctb], Michael Quinn [ctb], @javrucebo [ctb], @marc-outins [ctb], Roy Storey [ctb], Manish Saraswat [ctb], Morgan Jacob [ctb], Michael Schubmehl [ctb], Davis Vaughan [ctb], Leonardo Silvestri [ctb], Jim Hester [ctb], Anthony Damico [ctb], Sebastian Freundt [ctb], David Simons [ctb], Elliott Sales de Andrade [ctb], Cole Miller [ctb], Jens Peder Meldgaard [ctb], Vaclav Tlapak [ctb], Kevin Ushey [ctb], Dirk Eddelbuettel [ctb], Tony Fischetti [ctb], Ofek Shilon [ctb], Vadim Khotilovich [ctb], Hadley Wickham [ctb], Bennet Becker [ctb], Kyle Haynes [ctb], Boniface Christian Kamgang [ctb], Olivier Delmarcell [ctb], Josh O'Brien [ctb], Dereck de Mezquita [ctb], Michael Czekanski [ctb], Dmitry Shemetov [ctb], Nitish Jha [ctb], Joshua Wu [ctb], Iago Giné-Vázquez [ctb], Anirban Chetia [ctb], Doris Amoakohene [ctb], Angel Feliz [ctb], Michael Young [ctb], Mark Seeto [ctb], Philippe Grosjean [ctb], Vincent Runge [ctb], Christian Wia [ctb], Elise Maigné [ctb], Vincent Rocher [ctb], Vijay Lulla [ctb], Aljaž Sluga [ctb], Bill Evans [ctb]",
"Maintainer": "Tyson Barrett <t.barrett88@gmail.com>",
"Repository": "CRAN"
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"Version": "2.0-4",
"Source": "Repository",
"Date": "2024-02-27",
"Title": "Delaunay Triangulation and Dirichlet (Voronoi) Tessellation",
"Author": "Rolf Turner",
"Maintainer": "Rolf Turner <rolfturner@posteo.net>",
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],
"Suggests": [
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],
"Imports": [
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"Description": "Calculates the Delaunay triangulation and the Dirichlet or Voronoi tessellation (with respect to the entire plane) of a planar point set. Plots triangulations and tessellations in various ways. Clips tessellations to sub-windows. Calculates perimeters of tessellations. Summarises information about the tiles of the tessellation.\tCalculates the centroidal Voronoi (Dirichlet) tessellation using Lloyd's algorithm.",
"LazyData": "true",
"ByteCompile": "true",
"License": "GPL (>= 2)",
"NeedsCompilation": "yes",
"Repository": "CRAN",
"Encoding": "UTF-8"
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"desc": {
"Package": "desc",
"Version": "1.4.3",
"Source": "Repository",
"Title": "Manipulate DESCRIPTION Files",
"Authors@R": "c( person(\"Gábor\", \"Csárdi\", , \"csardi.gabor@gmail.com\", role = c(\"aut\", \"cre\")), person(\"Kirill\", \"Müller\", role = \"aut\"), person(\"Jim\", \"Hester\", , \"james.f.hester@gmail.com\", role = \"aut\"), person(\"Maëlle\", \"Salmon\", role = \"ctb\", comment = c(ORCID = \"0000-0002-2815-0399\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Maintainer": "Gábor Csárdi <csardi.gabor@gmail.com>",
"Description": "Tools to read, write, create, and manipulate DESCRIPTION files. It is intended for packages that create or manipulate other packages.",
"License": "MIT + file LICENSE",
"URL": "https://desc.r-lib.org/, https://github.com/r-lib/desc",
"BugReports": "https://github.com/r-lib/desc/issues",
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"Authors@R": "c(person(\"Dirk\", \"Eddelbuettel\", role = c(\"aut\", \"cre\"), email = \"edd@debian.org\", comment = c(ORCID = \"0000-0001-6419-907X\")), person(\"Antoine\", \"Lucas\", role=\"ctb\"), person(\"Jarek\", \"Tuszynski\", role=\"ctb\"), person(\"Henrik\", \"Bengtsson\", role=\"ctb\", comment = c(ORCID = \"0000-0002-7579-5165\")), person(\"Simon\", \"Urbanek\", role=\"ctb\", comment = c(ORCID = \"0000-0003-2297-1732\")), person(\"Mario\", \"Frasca\", role=\"ctb\"), person(\"Bryan\", \"Lewis\", role=\"ctb\"), person(\"Murray\", \"Stokely\", role=\"ctb\"), person(\"Hannes\", \"Muehleisen\", role=\"ctb\"), person(\"Duncan\", \"Murdoch\", role=\"ctb\"), person(\"Jim\", \"Hester\", role=\"ctb\"), person(\"Wush\", \"Wu\", role=\"ctb\", comment = c(ORCID = \"0000-0001-5180-0567\")), person(\"Qiang\", \"Kou\", role=\"ctb\", comment = c(ORCID = \"0000-0001-6786-5453\")), person(\"Thierry\", \"Onkelinx\", role=\"ctb\", comment = c(ORCID = \"0000-0001-8804-4216\")), person(\"Michel\", \"Lang\", role=\"ctb\", comment = c(ORCID = \"0000-0001-9754-0393\")), person(\"Viliam\", \"Simko\", role=\"ctb\"), person(\"Kurt\", \"Hornik\", role=\"ctb\", comment = c(ORCID = \"0000-0003-4198-9911\")), person(\"Radford\", \"Neal\", role=\"ctb\", comment = c(ORCID = \"0000-0002-2473-3407\")), person(\"Kendon\", \"Bell\", role=\"ctb\", comment = c(ORCID = \"0000-0002-9093-8312\")), person(\"Matthew\", \"de Queljoe\", role=\"ctb\"), person(\"Dmitry\", \"Selivanov\", role=\"ctb\"), person(\"Ion\", \"Suruceanu\", role=\"ctb\"), person(\"Bill\", \"Denney\", role=\"ctb\"), person(\"Dirk\", \"Schumacher\", role=\"ctb\"), person(\"András\", \"Svraka\", role=\"ctb\"), person(\"Sergey\", \"Fedorov\", role=\"ctb\"), person(\"Will\", \"Landau\", role=\"ctb\", comment = c(ORCID = \"0000-0003-1878-3253\")), person(\"Floris\", \"Vanderhaeghe\", role=\"ctb\", comment = c(ORCID = \"0000-0002-6378-6229\")), person(\"Kevin\", \"Tappe\", role=\"ctb\"), person(\"Harris\", \"McGehee\", role=\"ctb\"), person(\"Tim\", \"Mastny\", role=\"ctb\"), person(\"Aaron\", \"Peikert\", role=\"ctb\", comment = c(ORCID = \"0000-0001-7813-818X\")), person(\"Mark\", \"van der Loo\", role=\"ctb\", comment = c(ORCID = \"0000-0002-9807-4686\")), person(\"Chris\", \"Muir\", role=\"ctb\", comment = c(ORCID = \"0000-0003-2555-3878\")), person(\"Moritz\", \"Beller\", role=\"ctb\", comment = c(ORCID = \"0000-0003-4852-0526\")), person(\"Sebastian\", \"Campbell\", role=\"ctb\"), person(\"Winston\", \"Chang\", role=\"ctb\", comment = c(ORCID = \"0000-0002-1576-2126\")), person(\"Dean\", \"Attali\", role=\"ctb\", comment = c(ORCID = \"0000-0002-5645-3493\")), person(\"Michael\", \"Chirico\", role=\"ctb\", comment = c(ORCID = \"0000-0003-0787-087X\")), person(\"Kevin\", \"Ushey\", role=\"ctb\"))",
"Date": "2024-08-19",
"Title": "Create Compact Hash Digests of R Objects",
"Description": "Implementation of a function 'digest()' for the creation of hash digests of arbitrary R objects (using the 'md5', 'sha-1', 'sha-256', 'crc32', 'xxhash', 'murmurhash', 'spookyhash', 'blake3', 'crc32c', 'xxh3_64', and 'xxh3_128' algorithms) permitting easy comparison of R language objects, as well as functions such as'hmac()' to create hash-based message authentication code. Please note that this package is not meant to be deployed for cryptographic purposes for which more comprehensive (and widely tested) libraries such as 'OpenSSL' should be used.",
"URL": "https://github.com/eddelbuettel/digest, https://dirk.eddelbuettel.com/code/digest.html",
"BugReports": "https://github.com/eddelbuettel/digest/issues",
"Depends": [
"R (>= 3.3.0)"
],
"Imports": [
"utils"
],
"License": "GPL (>= 2)",
"Suggests": [
"tinytest",
"simplermarkdown"
],
"VignetteBuilder": "simplermarkdown",
"Encoding": "UTF-8",
"NeedsCompilation": "yes",
"Author": "Dirk Eddelbuettel [aut, cre] (<https://orcid.org/0000-0001-6419-907X>), Antoine Lucas [ctb], Jarek Tuszynski [ctb], Henrik Bengtsson [ctb] (<https://orcid.org/0000-0002-7579-5165>), Simon Urbanek [ctb] (<https://orcid.org/0000-0003-2297-1732>), Mario Frasca [ctb], Bryan Lewis [ctb], Murray Stokely [ctb], Hannes Muehleisen [ctb], Duncan Murdoch [ctb], Jim Hester [ctb], Wush Wu [ctb] (<https://orcid.org/0000-0001-5180-0567>), Qiang Kou [ctb] (<https://orcid.org/0000-0001-6786-5453>), Thierry Onkelinx [ctb] (<https://orcid.org/0000-0001-8804-4216>), Michel Lang [ctb] (<https://orcid.org/0000-0001-9754-0393>), Viliam Simko [ctb], Kurt Hornik [ctb] (<https://orcid.org/0000-0003-4198-9911>), Radford Neal [ctb] (<https://orcid.org/0000-0002-2473-3407>), Kendon Bell [ctb] (<https://orcid.org/0000-0002-9093-8312>), Matthew de Queljoe [ctb], Dmitry Selivanov [ctb], Ion Suruceanu [ctb], Bill Denney [ctb], Dirk Schumacher [ctb], András Svraka [ctb], Sergey Fedorov [ctb], Will Landau [ctb] (<https://orcid.org/0000-0003-1878-3253>), Floris Vanderhaeghe [ctb] (<https://orcid.org/0000-0002-6378-6229>), Kevin Tappe [ctb], Harris McGehee [ctb], Tim Mastny [ctb], Aaron Peikert [ctb] (<https://orcid.org/0000-0001-7813-818X>), Mark van der Loo [ctb] (<https://orcid.org/0000-0002-9807-4686>), Chris Muir [ctb] (<https://orcid.org/0000-0003-2555-3878>), Moritz Beller [ctb] (<https://orcid.org/0000-0003-4852-0526>), Sebastian Campbell [ctb], Winston Chang [ctb] (<https://orcid.org/0000-0002-1576-2126>), Dean Attali [ctb] (<https://orcid.org/0000-0002-5645-3493>), Michael Chirico [ctb] (<https://orcid.org/0000-0003-0787-087X>), Kevin Ushey [ctb]",
"Maintainer": "Dirk Eddelbuettel <edd@debian.org>",
"Repository": "CRAN"
},
"dotCall64": {
"Package": "dotCall64",
"Version": "1.2",
"Source": "Repository",
"Type": "Package",
"Title": "Enhanced Foreign Function Interface Supporting Long Vectors",
"Date": "2024-10-03",
"Authors@R": "c(person(\"Kaspar\", \"Moesinger\", role = c(\"aut\"), email = \"kaspar.moesinger@gmail.com\"), person(\"Florian\", \"Gerber\", role = c(\"aut\"), email = \"flora.fauna.gerber@gmail.com\", comment = c(ORCID = \"0000-0001-8545-5263\")), person(\"Reinhard\", \"Furrer\", role = c(\"cre\", \"ctb\"), email = \"reinhard.furrer@uzh.ch\", comment = c(ORCID = \"0000-0002-6319-2332\")))",
"Description": "Provides .C64(), which is an enhanced version of .C() and .Fortran() from the foreign function interface. .C64() supports long vectors, arguments of type 64-bit integer, and provides a mechanism to avoid unnecessary copies of read-only and write-only arguments. This makes it a convenient and fast interface to C/C++ and Fortran code.",
"License": "GPL (>= 2)",
"URL": "https://git.math.uzh.ch/reinhard.furrer/dotCall64",
"BugReports": "https://git.math.uzh.ch/reinhard.furrer/dotCall64/-/issues",
"Depends": [
"R (>= 4.0)"
],
"Suggests": [
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"RhpcBLASctl",
"RColorBrewer",
"roxygen2",
"spam",
"testthat"
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"Collate": "'vector_dc.R' 'dotCall64.R' 'zzz.R'",
"RoxygenNote": "7.2.3",
"NeedsCompilation": "yes",
"Author": "Kaspar Moesinger [aut], Florian Gerber [aut] (<https://orcid.org/0000-0001-8545-5263>), Reinhard Furrer [cre, ctb] (<https://orcid.org/0000-0002-6319-2332>)",
"Maintainer": "Reinhard Furrer <reinhard.furrer@uzh.ch>",
"Repository": "CRAN",
"Encoding": "UTF-8"
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"downlit": {
"Package": "downlit",
"Version": "0.4.4",
"Source": "Repository",
"Title": "Syntax Highlighting and Automatic Linking",
"Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "Syntax highlighting of R code, specifically designed for the needs of 'RMarkdown' packages like 'pkgdown', 'hugodown', and 'bookdown'. It includes linking of function calls to their documentation on the web, and automatic translation of ANSI escapes in output to the equivalent HTML.",
"License": "MIT + file LICENSE",
"URL": "https://downlit.r-lib.org/, https://github.com/r-lib/downlit",
"BugReports": "https://github.com/r-lib/downlit/issues",
"Depends": [
"R (>= 4.0.0)"
],
"Imports": [
"brio",
"desc",
"digest",
"evaluate",
"fansi",
"memoise",
"rlang",
"vctrs",
"withr",
"yaml"
],
"Suggests": [
"covr",
"htmltools",
"jsonlite",
"MASS",
"MassSpecWavelet",
"pkgload",
"rmarkdown",
"testthat (>= 3.0.0)",
"xml2"
],
"Config/Needs/website": "tidyverse/tidytemplate",
"Config/testthat/edition": "3",
"Encoding": "UTF-8",
"RoxygenNote": "7.3.1",
"NeedsCompilation": "no",
"Author": "Hadley Wickham [aut, cre], Posit Software, PBC [cph, fnd]",
"Maintainer": "Hadley Wickham <hadley@posit.co>",
"Repository": "CRAN"
},
"dplyr": {
"Package": "dplyr",
"Version": "1.1.4",
"Source": "Repository",
"Type": "Package",
"Title": "A Grammar of Data Manipulation",
"Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Romain\", \"François\", role = \"aut\", comment = c(ORCID = \"0000-0002-2444-4226\")), person(\"Lionel\", \"Henry\", role = \"aut\"), person(\"Kirill\", \"Müller\", role = \"aut\", comment = c(ORCID = \"0000-0002-1416-3412\")), person(\"Davis\", \"Vaughan\", , \"davis@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0003-4777-038X\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "A fast, consistent tool for working with data frame like objects, both in memory and out of memory.",
"License": "MIT + file LICENSE",
"URL": "https://dplyr.tidyverse.org, https://github.com/tidyverse/dplyr",
"BugReports": "https://github.com/tidyverse/dplyr/issues",
"Depends": [
"R (>= 3.5.0)"
],
"Imports": [
"cli (>= 3.4.0)",
"generics",
"glue (>= 1.3.2)",
"lifecycle (>= 1.0.3)",
"magrittr (>= 1.5)",
"methods",
"pillar (>= 1.9.0)",
"R6",
"rlang (>= 1.1.0)",
"tibble (>= 3.2.0)",
"tidyselect (>= 1.2.0)",
"utils",
"vctrs (>= 0.6.4)"
],
"Suggests": [
"bench",
"broom",
"callr",
"covr",
"DBI",
"dbplyr (>= 2.2.1)",
"ggplot2",
"knitr",
"Lahman",
"lobstr",
"microbenchmark",
"nycflights13",
"purrr",
"rmarkdown",
"RMySQL",
"RPostgreSQL",
"RSQLite",
"stringi (>= 1.7.6)",
"testthat (>= 3.1.5)",
"tidyr (>= 1.3.0)",
"withr"
],
"VignetteBuilder": "knitr",
"Config/Needs/website": "tidyverse, shiny, pkgdown, tidyverse/tidytemplate",
"Config/testthat/edition": "3",
"Encoding": "UTF-8",
"LazyData": "true",
"RoxygenNote": "7.2.3",
"NeedsCompilation": "yes",
"Author": "Hadley Wickham [aut, cre] (<https://orcid.org/0000-0003-4757-117X>), Romain François [aut] (<https://orcid.org/0000-0002-2444-4226>), Lionel Henry [aut], Kirill Müller [aut] (<https://orcid.org/0000-0002-1416-3412>), Davis Vaughan [aut] (<https://orcid.org/0000-0003-4777-038X>), Posit Software, PBC [cph, fnd]",
"Maintainer": "Hadley Wickham <hadley@posit.co>",
"Repository": "CRAN"
},
"dqrng": {
"Package": "dqrng",
"Version": "0.4.1",
"Source": "Repository",
"Type": "Package",
"Title": "Fast Pseudo Random Number Generators",
"Authors@R": "c( person(\"Ralf\", \"Stubner\", email = \"ralf.stubner@gmail.com\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0009-0009-1908-106X\")), person(\"daqana GmbH\", role = \"cph\"), person(\"David Blackman\", role = \"cph\", comment = \"Xoroshiro / Xoshiro family\"), person(\"Melissa O'Neill\", email = \"oneill@pcg-random.org\", role = \"cph\", comment = \"PCG family\"), person(\"Sebastiano Vigna\", email = \"vigna@acm.org\", role = \"cph\", comment = \"Xoroshiro / Xoshiro family\"), person(\"Aaron\", \"Lun\", role=\"ctb\"), person(\"Kyle\", \"Butts\", role = \"ctb\", email = \"kyle.butts@colorado.edu\"), person(\"Henrik\", \"Sloot\", role = \"ctb\"), person(\"Philippe\", \"Grosjean\", role = c(\"ctb\"), comment = c(ORCID = \"0000-0002-2694-9471\")) )",
"Description": "Several fast random number generators are provided as C++ header only libraries: The PCG family by O'Neill (2014 <https://www.cs.hmc.edu/tr/hmc-cs-2014-0905.pdf>) as well as the Xoroshiro / Xoshiro family by Blackman and Vigna (2021 <doi:10.1145/3460772>). In addition fast functions for generating random numbers according to a uniform, normal and exponential distribution are included. The latter two use the Ziggurat algorithm originally proposed by Marsaglia and Tsang (2000, <doi:10.18637/jss.v005.i08>). The fast sampling methods support unweighted sampling both with and without replacement. These functions are exported to R and as a C++ interface and are enabled for use with the default 64 bit generator from the PCG family, Xoroshiro128+/++/** and Xoshiro256+/++/** as well as the 64 bit version of the 20 rounds Threefry engine (Salmon et al., 2011, <doi:10.1145/2063384.2063405>) as provided by the package 'sitmo'.",
"License": "AGPL-3",
"Depends": [
"R (>= 3.5.0)"
],
"Imports": [
"Rcpp (>= 0.12.16)"
],
"LinkingTo": [
"Rcpp",
"BH (>= 1.64.0-1)",
"sitmo (>= 2.0.0)"
],
"RoxygenNote": "7.3.1",
"Suggests": [
"BH",
"testthat",
"knitr",
"rmarkdown",
"mvtnorm (>= 1.2-3)",
"bench",
"sitmo"
],
"VignetteBuilder": "knitr",
"URL": "https://daqana.github.io/dqrng/, https://github.com/daqana/dqrng",
"BugReports": "https://github.com/daqana/dqrng/issues",
"Encoding": "UTF-8",
"NeedsCompilation": "yes",
"Author": "Ralf Stubner [aut, cre] (<https://orcid.org/0009-0009-1908-106X>), daqana GmbH [cph], David Blackman [cph] (Xoroshiro / Xoshiro family), Melissa O'Neill [cph] (PCG family), Sebastiano Vigna [cph] (Xoroshiro / Xoshiro family), Aaron Lun [ctb], Kyle Butts [ctb], Henrik Sloot [ctb], Philippe Grosjean [ctb] (<https://orcid.org/0000-0002-2694-9471>)",
"Maintainer": "Ralf Stubner <ralf.stubner@gmail.com>",
"Repository": "CRAN"
},
"ellipsis": {
"Package": "ellipsis",
"Version": "0.3.2",
"Source": "Repository",
"Title": "Tools for Working with ...",
"Description": "The ellipsis is a powerful tool for extending functions. Unfortunately this power comes at a cost: misspelled arguments will be silently ignored. The ellipsis package provides a collection of functions to catch problems and alert the user.",
"Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@rstudio.com\", role = c(\"aut\", \"cre\")), person(\"RStudio\", role = \"cph\") )",
"License": "MIT + file LICENSE",
"Encoding": "UTF-8",
"RoxygenNote": "7.1.1",
"URL": "https://ellipsis.r-lib.org, https://github.com/r-lib/ellipsis",
"BugReports": "https://github.com/r-lib/ellipsis/issues",
"Depends": [
"R (>= 3.2)"
],
"Imports": [
"rlang (>= 0.3.0)"
],
"Suggests": [
"covr",
"testthat"
],
"NeedsCompilation": "yes",
"Author": "Hadley Wickham [aut, cre], RStudio [cph]",
"Maintainer": "Hadley Wickham <hadley@rstudio.com>",
"Repository": "CRAN"
},
"evaluate": {
"Package": "evaluate",
"Version": "1.0.3",
"Source": "Repository",
"Type": "Package",
"Title": "Parsing and Evaluation Tools that Provide More Details than the Default",
"Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\")), person(\"Yihui\", \"Xie\", role = \"aut\", comment = c(ORCID = \"0000-0003-0645-5666\")), person(\"Michael\", \"Lawrence\", role = \"ctb\"), person(\"Thomas\", \"Kluyver\", role = \"ctb\"), person(\"Jeroen\", \"Ooms\", role = \"ctb\"), person(\"Barret\", \"Schloerke\", role = \"ctb\"), person(\"Adam\", \"Ryczkowski\", role = \"ctb\"), person(\"Hiroaki\", \"Yutani\", role = \"ctb\"), person(\"Michel\", \"Lang\", role = \"ctb\"), person(\"Karolis\", \"Koncevičius\", role = \"ctb\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "Parsing and evaluation tools that make it easy to recreate the command line behaviour of R.",
"License": "MIT + file LICENSE",
"URL": "https://evaluate.r-lib.org/, https://github.com/r-lib/evaluate",
"BugReports": "https://github.com/r-lib/evaluate/issues",
"Depends": [
"R (>= 3.6.0)"
],
"Suggests": [
"callr",
"covr",
"ggplot2 (>= 3.3.6)",
"lattice",
"methods",
"pkgload",
"rlang",
"knitr",
"testthat (>= 3.0.0)",
"withr"
],
"Config/Needs/website": "tidyverse/tidytemplate",
"Config/testthat/edition": "3",
"Encoding": "UTF-8",
"RoxygenNote": "7.3.2",
"NeedsCompilation": "no",
"Author": "Hadley Wickham [aut, cre], Yihui Xie [aut] (<https://orcid.org/0000-0003-0645-5666>), Michael Lawrence [ctb], Thomas Kluyver [ctb], Jeroen Ooms [ctb], Barret Schloerke [ctb], Adam Ryczkowski [ctb], Hiroaki Yutani [ctb], Michel Lang [ctb], Karolis Koncevičius [ctb], Posit Software, PBC [cph, fnd]",
"Maintainer": "Hadley Wickham <hadley@posit.co>",
"Repository": "CRAN"
},
"fansi": {
"Package": "fansi",
"Version": "1.0.6",
"Source": "Repository",
"Title": "ANSI Control Sequence Aware String Functions",
"Description": "Counterparts to R string manipulation functions that account for the effects of ANSI text formatting control sequences.",
"Authors@R": "c( person(\"Brodie\", \"Gaslam\", email=\"brodie.gaslam@yahoo.com\", role=c(\"aut\", \"cre\")), person(\"Elliott\", \"Sales De Andrade\", role=\"ctb\"), person(family=\"R Core Team\", email=\"R-core@r-project.org\", role=\"cph\", comment=\"UTF8 byte length calcs from src/util.c\" ))",
"Depends": [
"R (>= 3.1.0)"
],
"License": "GPL-2 | GPL-3",
"URL": "https://github.com/brodieG/fansi",
"BugReports": "https://github.com/brodieG/fansi/issues",
"VignetteBuilder": "knitr",
"Suggests": [
"unitizer",
"knitr",
"rmarkdown"
],
"Imports": [
"grDevices",
"utils"
],
"RoxygenNote": "7.2.3",
"Encoding": "UTF-8",
"Collate": "'constants.R' 'fansi-package.R' 'internal.R' 'load.R' 'misc.R' 'nchar.R' 'strwrap.R' 'strtrim.R' 'strsplit.R' 'substr2.R' 'trimws.R' 'tohtml.R' 'unhandled.R' 'normalize.R' 'sgr.R'",
"NeedsCompilation": "yes",
"Author": "Brodie Gaslam [aut, cre], Elliott Sales De Andrade [ctb], R Core Team [cph] (UTF8 byte length calcs from src/util.c)",
"Maintainer": "Brodie Gaslam <brodie.gaslam@yahoo.com>",
"Repository": "CRAN"
},
"farver": {
"Package": "farver",
"Version": "2.1.2",
"Source": "Repository",
"Type": "Package",
"Title": "High Performance Colour Space Manipulation",
"Authors@R": "c( person(\"Thomas Lin\", \"Pedersen\", , \"thomas.pedersen@posit.co\", role = c(\"cre\", \"aut\"), comment = c(ORCID = \"0000-0002-5147-4711\")), person(\"Berendea\", \"Nicolae\", role = \"aut\", comment = \"Author of the ColorSpace C++ library\"), person(\"Romain\", \"François\", , \"romain@purrple.cat\", role = \"aut\", comment = c(ORCID = \"0000-0002-2444-4226\")), person(\"Posit, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "The encoding of colour can be handled in many different ways, using different colour spaces. As different colour spaces have different uses, efficient conversion between these representations are important. The 'farver' package provides a set of functions that gives access to very fast colour space conversion and comparisons implemented in C++, and offers speed improvements over the 'convertColor' function in the 'grDevices' package.",
"License": "MIT + file LICENSE",
"URL": "https://farver.data-imaginist.com, https://github.com/thomasp85/farver",
"BugReports": "https://github.com/thomasp85/farver/issues",
"Suggests": [
"covr",
"testthat (>= 3.0.0)"
],
"Config/testthat/edition": "3",
"Encoding": "UTF-8",
"RoxygenNote": "7.3.1",
"NeedsCompilation": "yes",
"Author": "Thomas Lin Pedersen [cre, aut] (<https://orcid.org/0000-0002-5147-4711>), Berendea Nicolae [aut] (Author of the ColorSpace C++ library), Romain François [aut] (<https://orcid.org/0000-0002-2444-4226>), Posit, PBC [cph, fnd]",
"Maintainer": "Thomas Lin Pedersen <thomas.pedersen@posit.co>",
"Repository": "CRAN"
},
"fastDummies": {
"Package": "fastDummies",
"Version": "1.7.5",
"Source": "Repository",
"Type": "Package",
"Title": "Fast Creation of Dummy (Binary) Columns and Rows from Categorical Variables",
"Authors@R": "c( person(\"Jacob\", \"Kaplan\", email = \"jkkaplan6@gmail.com\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-0601-0387\")), person(\"Benjamin\", \"Schlegel\", email = \"kontakt@benjaminschlegl.ch\", role = \"ctb\"))",
"Description": "Creates dummy columns from columns that have categorical variables (character or factor types). You can also specify which columns to make dummies out of, or which columns to ignore. Also creates dummy rows from character, factor, and Date columns. This package provides a significant speed increase from creating dummy variables through model.matrix().",
"Depends": [
"R (>= 2.10)"
],
"Imports": [
"data.table",
"tibble",
"stringr"
],
"License": "MIT + file LICENSE",
"Encoding": "UTF-8",
"URL": "https://github.com/jacobkap/fastDummies, https://jacobkap.github.io/fastDummies/",
"BugReports": "https://github.com/jacobkap/fastDummies/issues",
"RoxygenNote": "7.3.2",
"Suggests": [
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"knitr",
"rmarkdown",
"covr",
"spelling"
],
"VignetteBuilder": "knitr",
"Language": "en-US",
"NeedsCompilation": "no",
"Author": "Jacob Kaplan [aut, cre] (<https://orcid.org/0000-0002-0601-0387>), Benjamin Schlegel [ctb]",
"Maintainer": "Jacob Kaplan <jkkaplan6@gmail.com>",
"Repository": "CRAN"
},
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"Title": "Fast Data Structures",
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"Author": "Winston Chang [aut, cre], Posit Software, PBC [cph, fnd], Tessil [cph] (hopscotch_map library)",
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"Description": "Extends the fitdistr() function (of the MASS package) with several functions to help the fit of a parametric distribution to non-censored or censored data. Censored data may contain left censored, right censored and interval censored values, with several lower and upper bounds. In addition to maximum likelihood estimation (MLE), the package provides moment matching (MME), quantile matching (QME), maximum goodness-of-fit estimation (MGE) and maximum spacing estimation (MSE) methods (available only for non-censored data). Weighted versions of MLE, MME, QME and MSE are available. See e.g. Casella & Berger (2002), Statistical inference, Pacific Grove, for a general introduction to parametric estimation.",
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"grDevices",
"survival",
"methods"
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"License": "MIT + file LICENSE",
"URL": "https://github.com/rstudio/fontawesome, https://rstudio.github.io/fontawesome/",
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"Author": "Richard Iannone [aut, cre] (<https://orcid.org/0000-0003-3925-190X>), Christophe Dervieux [ctb] (<https://orcid.org/0000-0003-4474-2498>), Winston Chang [ctb], Dave Gandy [ctb, cph] (Font-Awesome font), Posit Software, PBC [cph, fnd]",
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"Repository": "CRAN"
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"Description": "Helpers for reordering factor levels (including moving specified levels to front, ordering by first appearance, reversing, and randomly shuffling), and tools for modifying factor levels (including collapsing rare levels into other, 'anonymising', and manually 'recoding').",
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"URL": "https://forcats.tidyverse.org/, https://github.com/tidyverse/forcats",
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"Author": "Hadley Wickham [aut, cre], RStudio [cph, fnd]",
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"Repository": "CRAN"
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"Version": "0.8-88",
"Source": "Repository",
"Priority": "recommended",
"Date": "2025-01-10",
"Title": "Read Data Stored by 'Minitab', 'S', 'SAS', 'SPSS', 'Stata', 'Systat', 'Weka', 'dBase', ...",
"Depends": [
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],
"Imports": [
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"Authors@R": "c( person(\"R Core Team\", email = \"R-core@R-project.org\", role = c(\"aut\", \"cph\", \"cre\"), comment = c(ROR = \"02zz1nj61\")), person(\"Roger\", \"Bivand\", role = c(\"ctb\", \"cph\")), person(c(\"Vincent\", \"J.\"), \"Carey\", role = c(\"ctb\", \"cph\")), person(\"Saikat\", \"DebRoy\", role = c(\"ctb\", \"cph\")), person(\"Stephen\", \"Eglen\", role = c(\"ctb\", \"cph\")), person(\"Rajarshi\", \"Guha\", role = c(\"ctb\", \"cph\")), person(\"Swetlana\", \"Herbrandt\", role = \"ctb\"), person(\"Nicholas\", \"Lewin-Koh\", role = c(\"ctb\", \"cph\")), person(\"Mark\", \"Myatt\", role = c(\"ctb\", \"cph\")), person(\"Michael\", \"Nelson\", role = \"ctb\"), person(\"Ben\", \"Pfaff\", role = \"ctb\"), person(\"Brian\", \"Quistorff\", role = \"ctb\"), person(\"Frank\", \"Warmerdam\", role = c(\"ctb\", \"cph\")), person(\"Stephen\", \"Weigand\", role = c(\"ctb\", \"cph\")), person(\"Free Software Foundation, Inc.\", role = \"cph\"))",
"Contact": "see 'MailingList'",
"Copyright": "see file COPYRIGHTS",
"Description": "Reading and writing data stored by some versions of 'Epi Info', 'Minitab', 'S', 'SAS', 'SPSS', 'Stata', 'Systat', 'Weka', and for reading and writing some 'dBase' files.",
"ByteCompile": "yes",
"Biarch": "yes",
"License": "GPL (>= 2)",
"BugReports": "https://bugs.r-project.org",
"MailingList": "R-help@r-project.org",
"URL": "https://svn.r-project.org/R-packages/trunk/foreign/",
"NeedsCompilation": "yes",
"Author": "R Core Team [aut, cph, cre] (02zz1nj61), Roger Bivand [ctb, cph], Vincent J. Carey [ctb, cph], Saikat DebRoy [ctb, cph], Stephen Eglen [ctb, cph], Rajarshi Guha [ctb, cph], Swetlana Herbrandt [ctb], Nicholas Lewin-Koh [ctb, cph], Mark Myatt [ctb, cph], Michael Nelson [ctb], Ben Pfaff [ctb], Brian Quistorff [ctb], Frank Warmerdam [ctb, cph], Stephen Weigand [ctb, cph], Free Software Foundation, Inc. [cph]",
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"Title": "Cross-Platform File System Operations Based on 'libuv'",
"Authors@R": "c( person(\"Jim\", \"Hester\", role = \"aut\"), person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\"), person(\"Gábor\", \"Csárdi\", , \"csardi.gabor@gmail.com\", role = c(\"aut\", \"cre\")), person(\"libuv project contributors\", role = \"cph\", comment = \"libuv library\"), person(\"Joyent, Inc. and other Node contributors\", role = \"cph\", comment = \"libuv library\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "A cross-platform interface to file system operations, built on top of the 'libuv' C library.",
"License": "MIT + file LICENSE",
"URL": "https://fs.r-lib.org, https://github.com/r-lib/fs",
"BugReports": "https://github.com/r-lib/fs/issues",
"Depends": [
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],
"Imports": [
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],
"Suggests": [
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"VignetteBuilder": "knitr",
"ByteCompile": "true",
"Config/Needs/website": "tidyverse/tidytemplate",
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"Copyright": "file COPYRIGHTS",
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"RoxygenNote": "7.2.3",
"SystemRequirements": "GNU make",
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"Author": "Jim Hester [aut], Hadley Wickham [aut], Gábor Csárdi [aut, cre], libuv project contributors [cph] (libuv library), Joyent, Inc. and other Node contributors [cph] (libuv library), Posit Software, PBC [cph, fnd]",
"Maintainer": "Gábor Csárdi <csardi.gabor@gmail.com>",
"Repository": "CRAN"
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"future": {
"Package": "future",
"Version": "1.34.0",
"Source": "Repository",
"Title": "Unified Parallel and Distributed Processing in R for Everyone",
"Imports": [
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"VignetteBuilder": "R.rsp",
"Authors@R": "c(person(\"Henrik\", \"Bengtsson\", role = c(\"aut\", \"cre\", \"cph\"), email = \"henrikb@braju.com\", comment = c(ORCID = \"0000-0002-7579-5165\")))",
"Description": "The purpose of this package is to provide a lightweight and unified Future API for sequential and parallel processing of R expression via futures. The simplest way to evaluate an expression in parallel is to use `x %<-% { expression }` with `plan(multisession)`. This package implements sequential, multicore, multisession, and cluster futures. With these, R expressions can be evaluated on the local machine, in parallel a set of local machines, or distributed on a mix of local and remote machines. Extensions to this package implement additional backends for processing futures via compute cluster schedulers, etc. Because of its unified API, there is no need to modify any code in order switch from sequential on the local machine to, say, distributed processing on a remote compute cluster. Another strength of this package is that global variables and functions are automatically identified and exported as needed, making it straightforward to tweak existing code to make use of futures.",
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"Repository": "CRAN"
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"Source": "Repository",
"Title": "Apply Function to Elements in Parallel using Futures",
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"Author": "Henrik Bengtsson [aut, cre, cph] (<https://orcid.org/0000-0002-7579-5165>), R Core Team [cph, ctb]",
"Maintainer": "Henrik Bengtsson <henrikb@braju.com>",
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"Source": "Repository",
"Title": "Common S3 Generics not Provided by Base R Methods Related to Model Fitting",
"Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@rstudio.com\", role = c(\"aut\", \"cre\")), person(\"Max\", \"Kuhn\", , \"max@rstudio.com\", role = \"aut\"), person(\"Davis\", \"Vaughan\", , \"davis@rstudio.com\", role = \"aut\"), person(\"RStudio\", role = \"cph\") )",
"Description": "In order to reduce potential package dependencies and conflicts, generics provides a number of commonly used S3 generics.",
"License": "MIT + file LICENSE",
"URL": "https://generics.r-lib.org, https://github.com/r-lib/generics",
"BugReports": "https://github.com/r-lib/generics/issues",
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],
"Imports": [
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],
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"Source": "Repository",
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"Description": "Simple git client for R based on 'libgit2' <https://libgit2.org> with support for SSH and HTTPS remotes. All functions in 'gert' use basic R data types (such as vectors and data-frames) for their arguments and return values. User credentials are shared with command line 'git' through the git-credential store and ssh keys stored on disk or ssh-agent.",
"License": "MIT + file LICENSE",
"URL": "https://docs.ropensci.org/gert/, https://ropensci.r-universe.dev/gert",
"BugReports": "https://github.com/r-lib/gert/issues",
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"credentials (>= 1.2.1)",
"openssl (>= 2.0.3)",
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"Author": "Jeroen Ooms [aut, cre] (<https://orcid.org/0000-0002-4035-0289>), Jennifer Bryan [ctb] (<https://orcid.org/0000-0002-6983-2759>)",
"Maintainer": "Jeroen Ooms <jeroenooms@gmail.com>",
"Repository": "CRAN"
},
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"Package": "ggfortify",
"Version": "0.4.17",
"Source": "Repository",
"Type": "Package",
"Title": "Data Visualization Tools for Statistical Analysis Results",
"Date": "2024-04-16",
"Authors@R": "c( person(\"Masaaki\", \"Horikoshi\", role = c(\"aut\"), email = \"sinhrks@gmail.com\"), person(\"Yuan\", \"Tang\", role = c(\"aut\", \"cre\"), email = \"terrytangyuan@gmail.com\", comment = c(ORCID = \"0000-0001-5243-233X\")), person(\"Austin\", \"Dickey\", role = c(\"ctb\")), person(\"Matthias\", \"Grenié\", role = c(\"ctb\")), person(\"Ryan\", \"Thompson\", role = c(\"ctb\")), person(\"Luciano\", \"Selzer\", role = c(\"ctb\")), person(\"Dario\", \"Strbenac\", role = c(\"ctb\")), person(\"Kirill\", \"Voronin\", role = c(\"ctb\")), person(\"Damir\", \"Pulatov\", role = c(\"ctb\")) )",
"Maintainer": "Yuan Tang <terrytangyuan@gmail.com>",
"URL": "https://github.com/sinhrks/ggfortify",
"BugReports": "https://github.com/sinhrks/ggfortify/issues",
"Encoding": "UTF-8",
"Description": "Unified plotting tools for statistics commonly used, such as GLM, time series, PCA families, clustering and survival analysis. The package offers a single plotting interface for these analysis results and plots in a unified style using 'ggplot2'.",
"License": "MIT + file LICENSE",
"VignetteBuilder": "knitr",
"Depends": [
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"ggplot2 (>= 2.0.0)"
],
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"gridExtra",
"grid",
"scales",
"stringr",
"tibble"
],
"Suggests": [
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"cluster",
"changepoint",
"fGarch",
"forecast",
"ggrepel",
"glmnet",
"grDevices",
"KFAS",
"knitr",
"lintr",
"mapdata",
"markdown",
"MASS",
"MSwM",
"nlme",
"raster",
"ROCR",
"sp",
"stats",
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"timeSeries",
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"Version": "3.5.1",
"Source": "Repository",
"Title": "Create Elegant Data Visualisations Using the Grammar of Graphics",
"Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Winston\", \"Chang\", role = \"aut\", comment = c(ORCID = \"0000-0002-1576-2126\")), person(\"Lionel\", \"Henry\", role = \"aut\"), person(\"Thomas Lin\", \"Pedersen\", , \"thomas.pedersen@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-5147-4711\")), person(\"Kohske\", \"Takahashi\", role = \"aut\"), person(\"Claus\", \"Wilke\", role = \"aut\", comment = c(ORCID = \"0000-0002-7470-9261\")), person(\"Kara\", \"Woo\", role = \"aut\", comment = c(ORCID = \"0000-0002-5125-4188\")), person(\"Hiroaki\", \"Yutani\", role = \"aut\", comment = c(ORCID = \"0000-0002-3385-7233\")), person(\"Dewey\", \"Dunnington\", role = \"aut\", comment = c(ORCID = \"0000-0002-9415-4582\")), person(\"Teun\", \"van den Brand\", role = \"aut\", comment = c(ORCID = \"0000-0002-9335-7468\")), person(\"Posit, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "A system for 'declaratively' creating graphics, based on \"The Grammar of Graphics\". You provide the data, tell 'ggplot2' how to map variables to aesthetics, what graphical primitives to use, and it takes care of the details.",
"License": "MIT + file LICENSE",
"URL": "https://ggplot2.tidyverse.org, https://github.com/tidyverse/ggplot2",
"BugReports": "https://github.com/tidyverse/ggplot2/issues",
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],
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"Title": "Various R Programming Tools for Plotting Data",
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"Authors@R": "c(person(\"Baptiste\", \"Auguie\", email = \"baptiste.auguie@gmail.com\", role = c(\"aut\", \"cre\")), person(\"Anton\", \"Antonov\", email = \"tonytonov@gmail.com\", role = c(\"ctb\")))",
"License": "GPL (>= 2)",
"Title": "Miscellaneous Functions for \"Grid\" Graphics",
"Type": "Package",
"Description": "Provides a number of user-level functions to work with \"grid\" graphics, notably to arrange multiple grid-based plots on a page, and draw tables.",
"VignetteBuilder": "knitr",
"Imports": [
"gtable",
"grid",
"grDevices",
"graphics",
"utils"
],
"Suggests": [
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"egg",
"lattice",
"knitr",
"testthat"
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"RoxygenNote": "6.0.1",
"NeedsCompilation": "no",
"Author": "Baptiste Auguie [aut, cre], Anton Antonov [ctb]",
"Maintainer": "Baptiste Auguie <baptiste.auguie@gmail.com>",
"Repository": "CRAN",
"Encoding": "UTF-8"
},
"gtable": {
"Package": "gtable",
"Version": "0.3.6",
"Source": "Repository",
"Title": "Arrange 'Grobs' in Tables",
"Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\"), person(\"Thomas Lin\", \"Pedersen\", , \"thomas.pedersen@posit.co\", role = c(\"aut\", \"cre\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "Tools to make it easier to work with \"tables\" of 'grobs'. The 'gtable' package defines a 'gtable' grob class that specifies a grid along with a list of grobs and their placement in the grid. Further the package makes it easy to manipulate and combine 'gtable' objects so that complex compositions can be built up sequentially.",
"License": "MIT + file LICENSE",
"URL": "https://gtable.r-lib.org, https://github.com/r-lib/gtable",
"BugReports": "https://github.com/r-lib/gtable/issues",
"Depends": [
"R (>= 4.0)"
],
"Imports": [
"cli",
"glue",
"grid",
"lifecycle",
"rlang (>= 1.1.0)",
"stats"
],
"Suggests": [
"covr",
"ggplot2",
"knitr",
"profvis",
"rmarkdown",
"testthat (>= 3.0.0)"
],
"VignetteBuilder": "knitr",
"Config/Needs/website": "tidyverse/tidytemplate",
"Config/testthat/edition": "3",
"Config/usethis/last-upkeep": "2024-10-25",
"Encoding": "UTF-8",
"RoxygenNote": "7.3.2",
"NeedsCompilation": "no",
"Author": "Hadley Wickham [aut], Thomas Lin Pedersen [aut, cre], Posit Software, PBC [cph, fnd]",
"Maintainer": "Thomas Lin Pedersen <thomas.pedersen@posit.co>",
"Repository": "CRAN"
},
"gtools": {
"Package": "gtools",
"Version": "3.9.5",
"Source": "Repository",
"Title": "Various R Programming Tools",
"Description": "Functions to assist in R programming, including: - assist in developing, updating, and maintaining R and R packages ('ask', 'checkRVersion', 'getDependencies', 'keywords', 'scat'), - calculate the logit and inverse logit transformations ('logit', 'inv.logit'), - test if a value is missing, empty or contains only NA and NULL values ('invalid'), - manipulate R's .Last function ('addLast'), - define macros ('defmacro'), - detect odd and even integers ('odd', 'even'), - convert strings containing non-ASCII characters (like single quotes) to plain ASCII ('ASCIIfy'), - perform a binary search ('binsearch'), - sort strings containing both numeric and character components ('mixedsort'), - create a factor variable from the quantiles of a continuous variable ('quantcut'), - enumerate permutations and combinations ('combinations', 'permutation'), - calculate and convert between fold-change and log-ratio ('foldchange', 'logratio2foldchange', 'foldchange2logratio'), - calculate probabilities and generate random numbers from Dirichlet distributions ('rdirichlet', 'ddirichlet'), - apply a function over adjacent subsets of a vector ('running'), - modify the TCP_NODELAY ('de-Nagle') flag for socket objects, - efficient 'rbind' of data frames, even if the column names don't match ('smartbind'), - generate significance stars from p-values ('stars.pval'), - convert characters to/from ASCII codes ('asc', 'chr'), - convert character vector to ASCII representation ('ASCIIfy'), - apply title capitalization rules to a character vector ('capwords').",
"Authors@R": "c(person(\"Gregory R.\", \"Warnes\", role = \"aut\"), person(\"Ben\", \"Bolker\", role = c(\"aut\", \"cre\"), email = \"bolker@mcmaster.ca\", comment=c(ORCID=\"0000-0002-2127-0443\")), person(\"Thomas\", \"Lumley\", role = \"aut\"), person(\"Arni\", \"Magnusson\", role = \"aut\"), person(\"Bill\", \"Venables\", role = \"aut\"), person(\"Genei\", \"Ryodan\", role = \"aut\"), person(\"Steffen\", \"Moeller\", role = \"aut\"), person(\"Ian\", \"Wilson\", role = \"ctb\"), person(\"Mark\", \"Davis\", role = \"ctb\"), person(\"Nitin\", \"Jain\", role=\"ctb\"), person(\"Scott\", \"Chamberlain\", role = \"ctb\"))",
"License": "GPL-2",
"Depends": [
"methods",
"stats",
"utils"
],
"URL": "https://github.com/r-gregmisc/gtools",
"BugReports": "https://github.com/r-gregmisc/gtools/issues",
"Language": "en-US",
"Suggests": [
"car",
"gplots",
"knitr",
"rstudioapi",
"SGP",
"taxize"
],
"RoxygenNote": "7.2.3",
"Encoding": "UTF-8",
"NeedsCompilation": "yes",
"Author": "Gregory R. Warnes [aut], Ben Bolker [aut, cre] (<https://orcid.org/0000-0002-2127-0443>), Thomas Lumley [aut], Arni Magnusson [aut], Bill Venables [aut], Genei Ryodan [aut], Steffen Moeller [aut], Ian Wilson [ctb], Mark Davis [ctb], Nitin Jain [ctb], Scott Chamberlain [ctb]",
"Maintainer": "Ben Bolker <bolker@mcmaster.ca>",
"Repository": "CRAN"
},
"harmony": {
"Package": "harmony",
"Version": "1.2.3",
"Source": "Repository",
"Title": "Fast, Sensitive, and Accurate Integration of Single Cell Data",
"Authors@R": "c( person(\"Ilya\", \"Korsunsky\", email = \"ilya.korsunsky@gmail.com\", role = c(\"cre\", \"aut\"), comment = c(ORCID = \"0000-0003-4848-3948\")), person(\"Martin\", \"Hemberg\", email = \"mhemberg@bwh.harvard.edu\", role = c(\"aut\"), comment = c(ORCID = \"0000-0001-8895-5239\")), person(\"Nikolaos\", \"Patikas\", email = \"nik.patik@gmail.com\", role = c(\"aut\", \"ctb\"), comment = c(ORCID = \"0000-0002-3978-0134\")), person(\"Hongcheng\", \"Yao\", email = \"hongchengyaonk@gmail.com\", role = c(\"aut\", \"ctb\"), comment = c(ORCID = \"0000-0002-0743-4835\")), person(\"Nghia\", \"Millard\", email = \"nmillard@g.harvard.edu\", role = \"aut\", comment = c(ORCID = \"0000-0002-0518-7674\")), person(\"Jean\", \"Fan\", email = \"jeanfan@fas.harvard.edu\", role = c(\"aut\", \"ctb\"), comment = c(ORCID = \"0000-0002-0212-5451\")), person(\"Kamil\", \"Slowikowski\", email = \"kslowikowski@gmail.com\", role = c(\"aut\", \"ctb\"), comment = c(ORCID = \"0000-0002-2843-6370\")), person(\"Miles\", \"Smith\", role = c(\"ctb\")), person(\"Soumya\", \"Raychaudhuri\", role = c(\"aut\"), comment = c(ORCID = \"0000-0002-1901-8265\")) )",
"Description": "Implementation of the Harmony algorithm for single cell integration, described in Korsunsky et al <doi:10.1038/s41592-019-0619-0>. Package includes a standalone Harmony function and interfaces to external frameworks.",
"URL": "https://github.com/immunogenomics/harmony",
"License": "GPL-3",
"Encoding": "UTF-8",
"RoxygenNote": "7.2.3",
"Depends": [
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"Rcpp"
],
"LazyData": "true",
"LazyDataCompression": "gzip",
"LinkingTo": [
"Rcpp",
"RcppArmadillo",
"RcppProgress"
],
"Imports": [
"dplyr",
"cowplot",
"ggplot2",
"Matrix",
"methods",
"tibble",
"rlang",
"RhpcBLASctl"
],
"Suggests": [
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"Seurat (>= 4.1.1)",
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"ggthemes",
"ggrepel",
"patchwork",
"tidyverse",
"tidyr",
"data.table"
],
"VignetteBuilder": "knitr",
"NeedsCompilation": "yes",
"Author": "Ilya Korsunsky [cre, aut] (<https://orcid.org/0000-0003-4848-3948>), Martin Hemberg [aut] (<https://orcid.org/0000-0001-8895-5239>), Nikolaos Patikas [aut, ctb] (<https://orcid.org/0000-0002-3978-0134>), Hongcheng Yao [aut, ctb] (<https://orcid.org/0000-0002-0743-4835>), Nghia Millard [aut] (<https://orcid.org/0000-0002-0518-7674>), Jean Fan [aut, ctb] (<https://orcid.org/0000-0002-0212-5451>), Kamil Slowikowski [aut, ctb] (<https://orcid.org/0000-0002-2843-6370>), Miles Smith [ctb], Soumya Raychaudhuri [aut] (<https://orcid.org/0000-0002-1901-8265>)",
"Maintainer": "Ilya Korsunsky <ilya.korsunsky@gmail.com>",
"Repository": "CRAN"
},
"haven": {
"Package": "haven",
"Version": "2.5.4",
"Source": "Repository",
"Title": "Import and Export 'SPSS', 'Stata' and 'SAS' Files",
"Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\")), person(\"Evan\", \"Miller\", role = c(\"aut\", \"cph\"), comment = \"Author of included ReadStat code\"), person(\"Danny\", \"Smith\", role = \"aut\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "Import foreign statistical formats into R via the embedded 'ReadStat' C library, <https://github.com/WizardMac/ReadStat>.",
"License": "MIT + file LICENSE",
"URL": "https://haven.tidyverse.org, https://github.com/tidyverse/haven, https://github.com/WizardMac/ReadStat",
"BugReports": "https://github.com/tidyverse/haven/issues",
"Depends": [
"R (>= 3.6)"
],
"Imports": [
"cli (>= 3.0.0)",
"forcats (>= 0.2.0)",
"hms",
"lifecycle",
"methods",
"readr (>= 0.1.0)",
"rlang (>= 0.4.0)",
"tibble",
"tidyselect",
"vctrs (>= 0.3.0)"
],
"Suggests": [
"covr",
"crayon",
"fs",
"knitr",
"pillar (>= 1.4.0)",
"rmarkdown",
"testthat (>= 3.0.0)",
"utf8"
],
"LinkingTo": [
"cpp11"
],
"VignetteBuilder": "knitr",
"Config/Needs/website": "tidyverse/tidytemplate",
"Config/testthat/edition": "3",
"Encoding": "UTF-8",
"RoxygenNote": "7.2.3",
"SystemRequirements": "GNU make, zlib: zlib1g-dev (deb), zlib-devel (rpm)",
"NeedsCompilation": "yes",
"Author": "Hadley Wickham [aut, cre], Evan Miller [aut, cph] (Author of included ReadStat code), Danny Smith [aut], Posit Software, PBC [cph, fnd]",
"Maintainer": "Hadley Wickham <hadley@posit.co>",
"Repository": "CRAN"
},
"here": {
"Package": "here",
"Version": "1.0.1",
"Source": "Repository",
"Title": "A Simpler Way to Find Your Files",
"Date": "2020-12-13",
"Authors@R": "c(person(given = \"Kirill\", family = \"M\\u00fcller\", role = c(\"aut\", \"cre\"), email = \"krlmlr+r@mailbox.org\", comment = c(ORCID = \"0000-0002-1416-3412\")), person(given = \"Jennifer\", family = \"Bryan\", role = \"ctb\", email = \"jenny@rstudio.com\", comment = c(ORCID = \"0000-0002-6983-2759\")))",
"Description": "Constructs paths to your project's files. Declare the relative path of a file within your project with 'i_am()'. Use the 'here()' function as a drop-in replacement for 'file.path()', it will always locate the files relative to your project root.",
"License": "MIT + file LICENSE",
"URL": "https://here.r-lib.org/, https://github.com/r-lib/here",
"BugReports": "https://github.com/r-lib/here/issues",
"Imports": [
"rprojroot (>= 2.0.2)"
],
"Suggests": [
"conflicted",
"covr",
"fs",
"knitr",
"palmerpenguins",
"plyr",
"readr",
"rlang",
"rmarkdown",
"testthat",
"uuid",
"withr"
],
"VignetteBuilder": "knitr",
"Encoding": "UTF-8",
"LazyData": "true",
"RoxygenNote": "7.1.1.9000",
"Config/testthat/edition": "3",
"NeedsCompilation": "no",
"Author": "Kirill Müller [aut, cre] (<https://orcid.org/0000-0002-1416-3412>), Jennifer Bryan [ctb] (<https://orcid.org/0000-0002-6983-2759>)",
"Maintainer": "Kirill Müller <krlmlr+r@mailbox.org>",
"Repository": "CRAN"
},
"highr": {
"Package": "highr",
"Version": "0.11",
"Source": "Repository",
"Type": "Package",
"Title": "Syntax Highlighting for R Source Code",
"Authors@R": "c( person(\"Yihui\", \"Xie\", role = c(\"aut\", \"cre\"), email = \"xie@yihui.name\", comment = c(ORCID = \"0000-0003-0645-5666\")), person(\"Yixuan\", \"Qiu\", role = \"aut\"), person(\"Christopher\", \"Gandrud\", role = \"ctb\"), person(\"Qiang\", \"Li\", role = \"ctb\") )",
"Description": "Provides syntax highlighting for R source code. Currently it supports LaTeX and HTML output. Source code of other languages is supported via Andre Simon's highlight package (<https://gitlab.com/saalen/highlight>).",
"Depends": [
"R (>= 3.3.0)"
],
"Imports": [
"xfun (>= 0.18)"
],
"Suggests": [
"knitr",
"markdown",
"testit"
],
"License": "GPL",
"URL": "https://github.com/yihui/highr",
"BugReports": "https://github.com/yihui/highr/issues",
"VignetteBuilder": "knitr",
"Encoding": "UTF-8",
"RoxygenNote": "7.3.1",
"NeedsCompilation": "no",
"Author": "Yihui Xie [aut, cre] (<https://orcid.org/0000-0003-0645-5666>), Yixuan Qiu [aut], Christopher Gandrud [ctb], Qiang Li [ctb]",
"Maintainer": "Yihui Xie <xie@yihui.name>",
"Repository": "CRAN"
},
"hms": {
"Package": "hms",
"Version": "1.1.3",
"Source": "Repository",
"Title": "Pretty Time of Day",
"Date": "2023-03-21",
"Authors@R": "c( person(\"Kirill\", \"Müller\", role = c(\"aut\", \"cre\"), email = \"kirill@cynkra.com\", comment = c(ORCID = \"0000-0002-1416-3412\")), person(\"R Consortium\", role = \"fnd\"), person(\"RStudio\", role = \"fnd\") )",
"Description": "Implements an S3 class for storing and formatting time-of-day values, based on the 'difftime' class.",
"Imports": [
"lifecycle",
"methods",
"pkgconfig",
"rlang (>= 1.0.2)",
"vctrs (>= 0.3.8)"
],
"Suggests": [
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"lubridate",
"pillar (>= 1.1.0)",
"testthat (>= 3.0.0)"
],
"License": "MIT + file LICENSE",
"Encoding": "UTF-8",
"URL": "https://hms.tidyverse.org/, https://github.com/tidyverse/hms",
"BugReports": "https://github.com/tidyverse/hms/issues",
"RoxygenNote": "7.2.3",
"Config/testthat/edition": "3",
"Config/autostyle/scope": "line_breaks",
"Config/autostyle/strict": "false",
"Config/Needs/website": "tidyverse/tidytemplate",
"NeedsCompilation": "no",
"Author": "Kirill Müller [aut, cre] (<https://orcid.org/0000-0002-1416-3412>), R Consortium [fnd], RStudio [fnd]",
"Maintainer": "Kirill Müller <kirill@cynkra.com>",
"Repository": "CRAN"
},
"htmltools": {
"Package": "htmltools",
"Version": "0.5.8.1",
"Source": "Repository",
"Type": "Package",
"Title": "Tools for HTML",
"Authors@R": "c( person(\"Joe\", \"Cheng\", , \"joe@posit.co\", role = \"aut\"), person(\"Carson\", \"Sievert\", , \"carson@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-4958-2844\")), person(\"Barret\", \"Schloerke\", , \"barret@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0001-9986-114X\")), person(\"Winston\", \"Chang\", , \"winston@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0002-1576-2126\")), person(\"Yihui\", \"Xie\", , \"yihui@posit.co\", role = \"aut\"), person(\"Jeff\", \"Allen\", role = \"aut\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "Tools for HTML generation and output.",
"License": "GPL (>= 2)",
"URL": "https://github.com/rstudio/htmltools, https://rstudio.github.io/htmltools/",
"BugReports": "https://github.com/rstudio/htmltools/issues",
"Depends": [
"R (>= 2.14.1)"
],
"Imports": [
"base64enc",
"digest",
"fastmap (>= 1.1.0)",
"grDevices",
"rlang (>= 1.0.0)",
"utils"
],
"Suggests": [
"Cairo",
"markdown",
"ragg",
"shiny",
"testthat",
"withr"
],
"Enhances": [
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],
"Config/Needs/check": "knitr",
"Config/Needs/website": "rstudio/quillt, bench",
"Encoding": "UTF-8",
"RoxygenNote": "7.3.1",
"Collate": "'colors.R' 'fill.R' 'html_dependency.R' 'html_escape.R' 'html_print.R' 'htmltools-package.R' 'images.R' 'known_tags.R' 'selector.R' 'staticimports.R' 'tag_query.R' 'utils.R' 'tags.R' 'template.R'",
"NeedsCompilation": "yes",
"Author": "Joe Cheng [aut], Carson Sievert [aut, cre] (<https://orcid.org/0000-0002-4958-2844>), Barret Schloerke [aut] (<https://orcid.org/0000-0001-9986-114X>), Winston Chang [aut] (<https://orcid.org/0000-0002-1576-2126>), Yihui Xie [aut], Jeff Allen [aut], Posit Software, PBC [cph, fnd]",
"Maintainer": "Carson Sievert <carson@posit.co>",
"Repository": "CRAN"
},
"htmlwidgets": {
"Package": "htmlwidgets",
"Version": "1.6.4",
"Source": "Repository",
"Type": "Package",
"Title": "HTML Widgets for R",
"Authors@R": "c( person(\"Ramnath\", \"Vaidyanathan\", role = c(\"aut\", \"cph\")), person(\"Yihui\", \"Xie\", role = \"aut\"), person(\"JJ\", \"Allaire\", role = \"aut\"), person(\"Joe\", \"Cheng\", , \"joe@posit.co\", role = \"aut\"), person(\"Carson\", \"Sievert\", , \"carson@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-4958-2844\")), person(\"Kenton\", \"Russell\", role = c(\"aut\", \"cph\")), person(\"Ellis\", \"Hughes\", role = \"ctb\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "A framework for creating HTML widgets that render in various contexts including the R console, 'R Markdown' documents, and 'Shiny' web applications.",
"License": "MIT + file LICENSE",
"URL": "https://github.com/ramnathv/htmlwidgets",
"BugReports": "https://github.com/ramnathv/htmlwidgets/issues",
"Imports": [
"grDevices",
"htmltools (>= 0.5.7)",
"jsonlite (>= 0.9.16)",
"knitr (>= 1.8)",
"rmarkdown",
"yaml"
],
"Suggests": [
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],
"Enhances": [
"shiny (>= 1.1)"
],
"VignetteBuilder": "knitr",
"Encoding": "UTF-8",
"RoxygenNote": "7.2.3",
"NeedsCompilation": "no",
"Author": "Ramnath Vaidyanathan [aut, cph], Yihui Xie [aut], JJ Allaire [aut], Joe Cheng [aut], Carson Sievert [aut, cre] (<https://orcid.org/0000-0002-4958-2844>), Kenton Russell [aut, cph], Ellis Hughes [ctb], Posit Software, PBC [cph, fnd]",
"Maintainer": "Carson Sievert <carson@posit.co>",
"Repository": "CRAN"
},
"httpuv": {
"Package": "httpuv",
"Version": "1.6.15",
"Source": "Repository",
"Type": "Package",
"Title": "HTTP and WebSocket Server Library",
"Authors@R": "c( person(\"Joe\", \"Cheng\", , \"joe@posit.co\", role = \"aut\"), person(\"Winston\", \"Chang\", , \"winston@posit.co\", role = c(\"aut\", \"cre\")), person(\"Posit, PBC\", \"fnd\", role = \"cph\"), person(\"Hector\", \"Corrada Bravo\", role = \"ctb\"), person(\"Jeroen\", \"Ooms\", role = \"ctb\"), person(\"Andrzej\", \"Krzemienski\", role = \"cph\", comment = \"optional.hpp\"), person(\"libuv project contributors\", role = \"cph\", comment = \"libuv library, see src/libuv/AUTHORS file\"), person(\"Joyent, Inc. and other Node contributors\", role = \"cph\", comment = \"libuv library, see src/libuv/AUTHORS file; and http-parser library, see src/http-parser/AUTHORS file\"), person(\"Niels\", \"Provos\", role = \"cph\", comment = \"libuv subcomponent: tree.h\"), person(\"Internet Systems Consortium, Inc.\", role = \"cph\", comment = \"libuv subcomponent: inet_pton and inet_ntop, contained in src/libuv/src/inet.c\"), person(\"Alexander\", \"Chemeris\", role = \"cph\", comment = \"libuv subcomponent: stdint-msvc2008.h (from msinttypes)\"), person(\"Google, Inc.\", role = \"cph\", comment = \"libuv subcomponent: pthread-fixes.c\"), person(\"Sony Mobile Communcations AB\", role = \"cph\", comment = \"libuv subcomponent: pthread-fixes.c\"), person(\"Berkeley Software Design Inc.\", role = \"cph\", comment = \"libuv subcomponent: android-ifaddrs.h, android-ifaddrs.c\"), person(\"Kenneth\", \"MacKay\", role = \"cph\", comment = \"libuv subcomponent: android-ifaddrs.h, android-ifaddrs.c\"), person(\"Emergya (Cloud4all, FP7/2007-2013, grant agreement no 289016)\", role = \"cph\", comment = \"libuv subcomponent: android-ifaddrs.h, android-ifaddrs.c\"), person(\"Steve\", \"Reid\", role = \"aut\", comment = \"SHA-1 implementation\"), person(\"James\", \"Brown\", role = \"aut\", comment = \"SHA-1 implementation\"), person(\"Bob\", \"Trower\", role = \"aut\", comment = \"base64 implementation\"), person(\"Alexander\", \"Peslyak\", role = \"aut\", comment = \"MD5 implementation\"), person(\"Trantor Standard Systems\", role = \"cph\", comment = \"base64 implementation\"), person(\"Igor\", \"Sysoev\", role = \"cph\", comment = \"http-parser\") )",
"Description": "Provides low-level socket and protocol support for handling HTTP and WebSocket requests directly from within R. It is primarily intended as a building block for other packages, rather than making it particularly easy to create complete web applications using httpuv alone. httpuv is built on top of the libuv and http-parser C libraries, both of which were developed by Joyent, Inc. (See LICENSE file for libuv and http-parser license information.)",
"License": "GPL (>= 2) | file LICENSE",
"URL": "https://github.com/rstudio/httpuv",
"BugReports": "https://github.com/rstudio/httpuv/issues",
"Depends": [
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],
"Imports": [
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"promises",
"R6",
"Rcpp (>= 1.0.7)",
"utils"
],
"Suggests": [
"callr",
"curl",
"testthat",
"websocket"
],
"LinkingTo": [
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"Rcpp"
],
"Encoding": "UTF-8",
"RoxygenNote": "7.3.1",
"SystemRequirements": "GNU make, zlib",
"Collate": "'RcppExports.R' 'httpuv.R' 'random_port.R' 'server.R' 'staticServer.R' 'static_paths.R' 'utils.R'",
"NeedsCompilation": "yes",
"Author": "Joe Cheng [aut], Winston Chang [aut, cre], Posit, PBC fnd [cph], Hector Corrada Bravo [ctb], Jeroen Ooms [ctb], Andrzej Krzemienski [cph] (optional.hpp), libuv project contributors [cph] (libuv library, see src/libuv/AUTHORS file), Joyent, Inc. and other Node contributors [cph] (libuv library, see src/libuv/AUTHORS file; and http-parser library, see src/http-parser/AUTHORS file), Niels Provos [cph] (libuv subcomponent: tree.h), Internet Systems Consortium, Inc. [cph] (libuv subcomponent: inet_pton and inet_ntop, contained in src/libuv/src/inet.c), Alexander Chemeris [cph] (libuv subcomponent: stdint-msvc2008.h (from msinttypes)), Google, Inc. [cph] (libuv subcomponent: pthread-fixes.c), Sony Mobile Communcations AB [cph] (libuv subcomponent: pthread-fixes.c), Berkeley Software Design Inc. [cph] (libuv subcomponent: android-ifaddrs.h, android-ifaddrs.c), Kenneth MacKay [cph] (libuv subcomponent: android-ifaddrs.h, android-ifaddrs.c), Emergya (Cloud4all, FP7/2007-2013, grant agreement no 289016) [cph] (libuv subcomponent: android-ifaddrs.h, android-ifaddrs.c), Steve Reid [aut] (SHA-1 implementation), James Brown [aut] (SHA-1 implementation), Bob Trower [aut] (base64 implementation), Alexander Peslyak [aut] (MD5 implementation), Trantor Standard Systems [cph] (base64 implementation), Igor Sysoev [cph] (http-parser)",
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"Repository": "CRAN"
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},
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"Source": "Repository",
"Title": "Perform HTTP Requests and Process the Responses",
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"Description": "Tools for creating and modifying HTTP requests, then performing them and processing the results. 'httr2' is a modern re-imagining of 'httr' that uses a pipe-based interface and solves more of the problems that API wrapping packages face.",
"License": "MIT + file LICENSE",
"URL": "https://httr2.r-lib.org, https://github.com/r-lib/httr2",
"BugReports": "https://github.com/r-lib/httr2/issues",
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],
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"openssl",
"R6",
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"rlang (>= 1.1.0)",
"vctrs (>= 0.6.3)",
"withr"
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"bench",
"clipr",
"covr",
"docopt",
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"jose",
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"later (>= 1.4.0)",
"paws.common",
"promises",
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"tibble",
"webfakes",
"xml2"
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"Config/Needs/website": "tidyverse/tidytemplate",
"Config/testthat/edition": "3",
"Config/testthat/parallel": "true",
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},
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"Title": "Independent Component Analysis",
"Date": "2022-07-08",
"Author": "Nathaniel E. Helwig <helwig@umn.edu>",
"Maintainer": "Nathaniel E. Helwig <helwig@umn.edu>",
"Description": "Independent Component Analysis (ICA) using various algorithms: FastICA, Information-Maximization (Infomax), and Joint Approximate Diagonalization of Eigenmatrices (JADE).",
"License": "GPL (>= 2)",
"NeedsCompilation": "no",
"Repository": "CRAN",
"Encoding": "UTF-8"
},
"igraph": {
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"Source": "Repository",
"Title": "Network Analysis and Visualization",
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"Description": "Routines for simple graphs and network analysis. It can handle large graphs very well and provides functions for generating random and regular graphs, graph visualization, centrality methods and much more.",
"License": "GPL (>= 2)",
"URL": "https://r.igraph.org/, https://igraph.org/, https://igraph.discourse.group/",
"BugReports": "https://github.com/igraph/rigraph/issues",
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"R (>= 3.5.0)"
],
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"utils",
"vctrs"
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"rgl (>= 1.3.14)",
"rmarkdown",
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"withr"
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"Enhances": [
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],
"LinkingTo": [
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],
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"Config/Needs/coverage": "covr",
"Config/Needs/website": "readr",
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"Config/testthat/parallel": "true",
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"Author": "Gábor Csárdi [aut] (<https://orcid.org/0000-0001-7098-9676>), Tamás Nepusz [aut] (<https://orcid.org/0000-0002-1451-338X>), Vincent Traag [aut] (<https://orcid.org/0000-0003-3170-3879>), Szabolcs Horvát [aut] (<https://orcid.org/0000-0002-3100-523X>), Fabio Zanini [aut] (<https://orcid.org/0000-0001-7097-8539>), Daniel Noom [aut], Kirill Müller [aut, cre] (<https://orcid.org/0000-0002-1416-3412>), Maëlle Salmon [ctb], Michael Antonov [ctb], Chan Zuckerberg Initiative [fnd]",
"Maintainer": "Kirill Müller <kirill@cynkra.com>",
"Repository": "CRAN"
},
"ini": {
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"Version": "0.3.1",
"Source": "Repository",
"Type": "Package",
"Title": "Read and Write '.ini' Files",
"Date": "2018-05-19",
"Author": "David Valentim Dias",
"Maintainer": "David Valentim Dias <dvdscripter@gmail.com>",
"Description": "Parse simple '.ini' configuration files to an structured list. Users can manipulate this resulting list with lapply() functions. This same structured list can be used to write back to file after modifications.",
"License": "GPL-3",
"URL": "https://github.com/dvdscripter/ini",
"BugReports": "https://github.com/dvdscripter/ini/issues",
"LazyData": "FALSE",
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"Suggests": [
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],
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"Repository": "CRAN",
"Encoding": "UTF-8"
},
"irlba": {
"Package": "irlba",
"Version": "2.3.5.1",
"Source": "Repository",
"Type": "Package",
"Title": "Fast Truncated Singular Value Decomposition and Principal Components Analysis for Large Dense and Sparse Matrices",
"Date": "2021-12-05",
"Authors@R": "c( person(\"Jim\", \"Baglama\", role=c(\"aut\", \"cph\"), email=\"jbaglama@uri.edu\"), person(\"Lothar\", \"Reichel\", role=c(\"aut\", \"cph\"), email=\"reichel@math.kent.edu\"), person(\"B. W.\", \"Lewis\", role=c(\"aut\",\"cre\",\"cph\"), email=\"blewis@illposed.net\"))",
"Description": "Fast and memory efficient methods for truncated singular value decomposition and principal components analysis of large sparse and dense matrices.",
"Depends": [
"R (>= 3.6.2)",
"Matrix"
],
"LinkingTo": [
"Matrix"
],
"Imports": [
"stats",
"methods"
],
"License": "GPL-3",
"BugReports": "https://github.com/bwlewis/irlba/issues",
"RoxygenNote": "5.0.1",
"NeedsCompilation": "yes",
"Author": "Jim Baglama [aut, cph], Lothar Reichel [aut, cph], B. W. Lewis [aut, cre, cph]",
"Maintainer": "B. W. Lewis <blewis@illposed.net>",
"Repository": "CRAN",
"Encoding": "UTF-8"
},
"isoband": {
"Package": "isoband",
"Version": "0.2.7",
"Source": "Repository",
"Title": "Generate Isolines and Isobands from Regularly Spaced Elevation Grids",
"Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Claus O.\", \"Wilke\", , \"wilke@austin.utexas.edu\", role = \"aut\", comment = c(\"Original author\", ORCID = \"0000-0002-7470-9261\")), person(\"Thomas Lin\", \"Pedersen\", , \"thomasp85@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0002-5147-4711\")) )",
"Description": "A fast C++ implementation to generate contour lines (isolines) and contour polygons (isobands) from regularly spaced grids containing elevation data.",
"License": "MIT + file LICENSE",
"URL": "https://isoband.r-lib.org",
"BugReports": "https://github.com/r-lib/isoband/issues",
"Imports": [
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"utils"
],
"Suggests": [
"covr",
"ggplot2",
"knitr",
"magick",
"microbenchmark",
"rmarkdown",
"sf",
"testthat",
"xml2"
],
"VignetteBuilder": "knitr",
"Config/Needs/website": "tidyverse/tidytemplate",
"Config/testthat/edition": "3",
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"SystemRequirements": "C++11",
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"Author": "Hadley Wickham [aut, cre] (<https://orcid.org/0000-0003-4757-117X>), Claus O. Wilke [aut] (Original author, <https://orcid.org/0000-0002-7470-9261>), Thomas Lin Pedersen [aut] (<https://orcid.org/0000-0002-5147-4711>)",
"Maintainer": "Hadley Wickham <hadley@posit.co>",
"Repository": "CRAN"
},
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"Package": "jquerylib",
"Version": "0.1.4",
"Source": "Repository",
"Title": "Obtain 'jQuery' as an HTML Dependency Object",
"Authors@R": "c( person(\"Carson\", \"Sievert\", role = c(\"aut\", \"cre\"), email = \"carson@rstudio.com\", comment = c(ORCID = \"0000-0002-4958-2844\")), person(\"Joe\", \"Cheng\", role = \"aut\", email = \"joe@rstudio.com\"), person(family = \"RStudio\", role = \"cph\"), person(family = \"jQuery Foundation\", role = \"cph\", comment = \"jQuery library and jQuery UI library\"), person(family = \"jQuery contributors\", role = c(\"ctb\", \"cph\"), comment = \"jQuery library; authors listed in inst/lib/jquery-AUTHORS.txt\") )",
"Description": "Obtain any major version of 'jQuery' (<https://code.jquery.com/>) and use it in any webpage generated by 'htmltools' (e.g. 'shiny', 'htmlwidgets', and 'rmarkdown'). Most R users don't need to use this package directly, but other R packages (e.g. 'shiny', 'rmarkdown', etc.) depend on this package to avoid bundling redundant copies of 'jQuery'.",
"License": "MIT + file LICENSE",
"Encoding": "UTF-8",
"Config/testthat/edition": "3",
"RoxygenNote": "7.0.2",
"Imports": [
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],
"Suggests": [
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],
"NeedsCompilation": "no",
"Author": "Carson Sievert [aut, cre] (<https://orcid.org/0000-0002-4958-2844>), Joe Cheng [aut], RStudio [cph], jQuery Foundation [cph] (jQuery library and jQuery UI library), jQuery contributors [ctb, cph] (jQuery library; authors listed in inst/lib/jquery-AUTHORS.txt)",
"Maintainer": "Carson Sievert <carson@rstudio.com>",
"Repository": "CRAN"
},
"jsonlite": {
"Package": "jsonlite",
"Version": "1.9.1",
"Source": "Repository",
"Title": "A Simple and Robust JSON Parser and Generator for R",
"License": "MIT + file LICENSE",
"Depends": [
"methods"
],
"Authors@R": "c( person(\"Jeroen\", \"Ooms\", role = c(\"aut\", \"cre\"), email = \"jeroenooms@gmail.com\", comment = c(ORCID = \"0000-0002-4035-0289\")), person(\"Duncan\", \"Temple Lang\", role = \"ctb\"), person(\"Lloyd\", \"Hilaiel\", role = \"cph\", comment=\"author of bundled libyajl\"))",
"URL": "https://jeroen.r-universe.dev/jsonlite https://arxiv.org/abs/1403.2805",
"BugReports": "https://github.com/jeroen/jsonlite/issues",
"Maintainer": "Jeroen Ooms <jeroenooms@gmail.com>",
"VignetteBuilder": "knitr, R.rsp",
"Description": "A reasonably fast JSON parser and generator, optimized for statistical data and the web. Offers simple, flexible tools for working with JSON in R, and is particularly powerful for building pipelines and interacting with a web API. The implementation is based on the mapping described in the vignette (Ooms, 2014). In addition to converting JSON data from/to R objects, 'jsonlite' contains functions to stream, validate, and prettify JSON data. The unit tests included with the package verify that all edge cases are encoded and decoded consistently for use with dynamic data in systems and applications.",
"Suggests": [
"httr",
"vctrs",
"testthat",
"knitr",
"rmarkdown",
"R.rsp",
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],
"RoxygenNote": "7.2.3",
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"NeedsCompilation": "yes",
"Author": "Jeroen Ooms [aut, cre] (<https://orcid.org/0000-0002-4035-0289>), Duncan Temple Lang [ctb], Lloyd Hilaiel [cph] (author of bundled libyajl)",
"Repository": "CRAN"
},
"knitr": {
"Package": "knitr",
"Version": "1.49",
"Source": "Repository",
"Type": "Package",
"Title": "A General-Purpose Package for Dynamic Report Generation in R",
"Authors@R": "c( person(\"Yihui\", \"Xie\", role = c(\"aut\", \"cre\"), email = \"xie@yihui.name\", comment = c(ORCID = \"0000-0003-0645-5666\")), person(\"Abhraneel\", \"Sarma\", role = \"ctb\"), person(\"Adam\", \"Vogt\", role = \"ctb\"), person(\"Alastair\", \"Andrew\", role = \"ctb\"), person(\"Alex\", \"Zvoleff\", role = \"ctb\"), person(\"Amar\", \"Al-Zubaidi\", role = \"ctb\"), person(\"Andre\", \"Simon\", role = \"ctb\", comment = \"the CSS files under inst/themes/ were derived from the Highlight package http://www.andre-simon.de\"), person(\"Aron\", \"Atkins\", role = \"ctb\"), person(\"Aaron\", \"Wolen\", role = \"ctb\"), person(\"Ashley\", \"Manton\", role = \"ctb\"), person(\"Atsushi\", \"Yasumoto\", role = \"ctb\", comment = c(ORCID = \"0000-0002-8335-495X\")), person(\"Ben\", \"Baumer\", role = \"ctb\"), person(\"Brian\", \"Diggs\", role = \"ctb\"), person(\"Brian\", \"Zhang\", role = \"ctb\"), person(\"Bulat\", \"Yapparov\", role = \"ctb\"), person(\"Cassio\", \"Pereira\", role = \"ctb\"), person(\"Christophe\", \"Dervieux\", role = \"ctb\"), person(\"David\", \"Hall\", role = \"ctb\"), person(\"David\", \"Hugh-Jones\", role = \"ctb\"), person(\"David\", \"Robinson\", role = \"ctb\"), person(\"Doug\", \"Hemken\", role = \"ctb\"), person(\"Duncan\", \"Murdoch\", role = \"ctb\"), person(\"Elio\", \"Campitelli\", role = \"ctb\"), person(\"Ellis\", \"Hughes\", role = \"ctb\"), person(\"Emily\", \"Riederer\", role = \"ctb\"), person(\"Fabian\", \"Hirschmann\", role = \"ctb\"), person(\"Fitch\", \"Simeon\", role = \"ctb\"), person(\"Forest\", \"Fang\", role = \"ctb\"), person(c(\"Frank\", \"E\", \"Harrell\", \"Jr\"), role = \"ctb\", comment = \"the Sweavel package at inst/misc/Sweavel.sty\"), person(\"Garrick\", \"Aden-Buie\", role = \"ctb\"), person(\"Gregoire\", \"Detrez\", role = \"ctb\"), person(\"Hadley\", \"Wickham\", role = \"ctb\"), person(\"Hao\", \"Zhu\", role = \"ctb\"), person(\"Heewon\", \"Jeon\", role = \"ctb\"), person(\"Henrik\", \"Bengtsson\", role = \"ctb\"), person(\"Hiroaki\", \"Yutani\", role = \"ctb\"), person(\"Ian\", \"Lyttle\", role = \"ctb\"), person(\"Hodges\", \"Daniel\", role = \"ctb\"), person(\"Jacob\", \"Bien\", role = \"ctb\"), person(\"Jake\", \"Burkhead\", role = \"ctb\"), person(\"James\", \"Manton\", role = \"ctb\"), person(\"Jared\", \"Lander\", role = \"ctb\"), person(\"Jason\", \"Punyon\", role = \"ctb\"), person(\"Javier\", \"Luraschi\", role = \"ctb\"), person(\"Jeff\", \"Arnold\", role = \"ctb\"), person(\"Jenny\", \"Bryan\", role = \"ctb\"), person(\"Jeremy\", \"Ashkenas\", role = c(\"ctb\", \"cph\"), comment = \"the CSS file at inst/misc/docco-classic.css\"), person(\"Jeremy\", \"Stephens\", role = \"ctb\"), person(\"Jim\", \"Hester\", role = \"ctb\"), person(\"Joe\", \"Cheng\", role = \"ctb\"), person(\"Johannes\", \"Ranke\", role = \"ctb\"), person(\"John\", \"Honaker\", role = \"ctb\"), person(\"John\", \"Muschelli\", role = \"ctb\"), person(\"Jonathan\", \"Keane\", role = \"ctb\"), person(\"JJ\", \"Allaire\", role = \"ctb\"), person(\"Johan\", \"Toloe\", role = \"ctb\"), person(\"Jonathan\", \"Sidi\", role = \"ctb\"), person(\"Joseph\", \"Larmarange\", role = \"ctb\"), person(\"Julien\", \"Barnier\", role = \"ctb\"), person(\"Kaiyin\", \"Zhong\", role = \"ctb\"), person(\"Kamil\", \"Slowikowski\", role = \"ctb\"), person(\"Karl\", \"Forner\", role = \"ctb\"), person(c(\"Kevin\", \"K.\"), \"Smith\", role = \"ctb\"), person(\"Kirill\", \"Mueller\", role = \"ctb\"), person(\"Kohske\", \"Takahashi\", role = \"ctb\"), person(\"Lorenz\", \"Walthert\", role = \"ctb\"), person(\"Lucas\", \"Gallindo\", role = \"ctb\"), person(\"Marius\", \"Hofert\", role = \"ctb\"), person(\"Martin\", \"Modrák\", role = \"ctb\"), person(\"Michael\", \"Chirico\", role = \"ctb\"), person(\"Michael\", \"Friendly\", role = \"ctb\"), person(\"Michal\", \"Bojanowski\", role = \"ctb\"), person(\"Michel\", \"Kuhlmann\", role = \"ctb\"), person(\"Miller\", \"Patrick\", role = \"ctb\"), person(\"Nacho\", \"Caballero\", role = \"ctb\"), person(\"Nick\", \"Salkowski\", role = \"ctb\"), person(\"Niels Richard\", \"Hansen\", role = \"ctb\"), person(\"Noam\", \"Ross\", role = \"ctb\"), person(\"Obada\", \"Mahdi\", role = \"ctb\"), person(\"Pavel N.\", \"Krivitsky\", role = \"ctb\", comment=c(ORCID = \"0000-0002-9101-3362\")), person(\"Pedro\", \"Faria\", role = \"ctb\"), person(\"Qiang\", \"Li\", role = \"ctb\"), person(\"Ramnath\", \"Vaidyanathan\", role = \"ctb\"), person(\"Richard\", \"Cotton\", role = \"ctb\"), person(\"Robert\", \"Krzyzanowski\", role = \"ctb\"), person(\"Rodrigo\", \"Copetti\", role = \"ctb\"), person(\"Romain\", \"Francois\", role = \"ctb\"), person(\"Ruaridh\", \"Williamson\", role = \"ctb\"), person(\"Sagiru\", \"Mati\", role = \"ctb\", comment = c(ORCID = \"0000-0003-1413-3974\")), person(\"Scott\", \"Kostyshak\", role = \"ctb\"), person(\"Sebastian\", \"Meyer\", role = \"ctb\"), person(\"Sietse\", \"Brouwer\", role = \"ctb\"), person(c(\"Simon\", \"de\"), \"Bernard\", role = \"ctb\"), person(\"Sylvain\", \"Rousseau\", role = \"ctb\"), person(\"Taiyun\", \"Wei\", role = \"ctb\"), person(\"Thibaut\", \"Assus\", role = \"ctb\"), person(\"Thibaut\", \"Lamadon\", role = \"ctb\"), person(\"Thomas\", \"Leeper\", role = \"ctb\"), person(\"Tim\", \"Mastny\", role = \"ctb\"), person(\"Tom\", \"Torsney-Weir\", role = \"ctb\"), person(\"Trevor\", \"Davis\", role = \"ctb\"), person(\"Viktoras\", \"Veitas\", role = \"ctb\"), person(\"Weicheng\", \"Zhu\", role = \"ctb\"), person(\"Wush\", \"Wu\", role = \"ctb\"), person(\"Zachary\", \"Foster\", role = \"ctb\"), person(\"Zhian N.\", \"Kamvar\", role = \"ctb\", comment = c(ORCID = \"0000-0003-1458-7108\")), person(given = \"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "Provides a general-purpose tool for dynamic report generation in R using Literate Programming techniques.",
"Depends": [
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],
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"highr (>= 0.11)",
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],
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"codetools",
"DBI (>= 0.4-1)",
"digest",
"formatR",
"gifski",
"gridSVG",
"htmlwidgets (>= 0.7)",
"jpeg",
"JuliaCall (>= 0.11.1)",
"magick",
"litedown",
"markdown (>= 1.3)",
"png",
"ragg",
"reticulate (>= 1.4)",
"rgl (>= 0.95.1201)",
"rlang",
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"tikzDevice (>= 0.10)",
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"Title": "Environments Behaving (Almost) as Lists",
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"Description": "List environments are environments that have list-like properties. For instance, the elements of a list environment are ordered and can be accessed and iterated over using index subsetting, e.g. 'x <- listenv(a = 1, b = 2); for (i in seq_along(x)) x[[i]] <- x[[i]] ^ 2; y <- as.list(x)'.",
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"Description": "A collection of tests, data sets, and examples for diagnostic checking in linear regression models. Furthermore, some generic tools for inference in parametric models are provided.",
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"License": "GPL-2 | GPL-3",
"NeedsCompilation": "yes",
"Author": "Torsten Hothorn [aut] (<https://orcid.org/0000-0001-8301-0471>), Achim Zeileis [aut, cre] (<https://orcid.org/0000-0003-0918-3766>), Richard W. Farebrother [aut] (pan.f), Clint Cummins [aut] (pan.f), Giovanni Millo [ctb], David Mitchell [ctb]",
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"Description": "Provides a mechanism for chaining commands with a new forward-pipe operator, %>%. This operator will forward a value, or the result of an expression, into the next function call/expression. There is flexible support for the type of right-hand side expressions. For more information, see package vignette. To quote Rene Magritte, \"Ceci n'est pas un pipe.\"",
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"Title": "Functions that Apply to Rows and Columns of Matrices (and to Vectors)",
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"Author": "Henrik Bengtsson [aut, cre, cph], Constantin Ahlmann-Eltze [ctb], Hector Corrada Bravo [ctb], Robert Gentleman [ctb], Jan Gleixner [ctb], Peter Hickey [ctb], Ola Hossjer [ctb], Harris Jaffee [ctb], Dongcan Jiang [ctb], Peter Langfelder [ctb], Brian Montgomery [ctb], Angelina Panagopoulou [ctb], Hugh Parsonage [ctb], Jakob Peder Pettersen [ctb]",
"Maintainer": "Henrik Bengtsson <henrikb@braju.com>",
"Description": "High-performing functions operating on rows and columns of matrices, e.g. col / rowMedians(), col / rowRanks(), and col / rowSds(). Functions optimized per data type and for subsetted calculations such that both memory usage and processing time is minimized. There are also optimized vector-based methods, e.g. binMeans(), madDiff() and weightedMedian().",
"License": "Artistic-2.0",
"LazyLoad": "TRUE",
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"ByteCompile": "TRUE",
"URL": "https://github.com/HenrikBengtsson/matrixStats",
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},
"mime": {
"Package": "mime",
"Version": "0.12",
"Source": "Repository",
"Type": "Package",
"Title": "Map Filenames to MIME Types",
"Authors@R": "c( person(\"Yihui\", \"Xie\", role = c(\"aut\", \"cre\"), email = \"xie@yihui.name\", comment = c(ORCID = \"0000-0003-0645-5666\")), person(\"Jeffrey\", \"Horner\", role = \"ctb\"), person(\"Beilei\", \"Bian\", role = \"ctb\") )",
"Description": "Guesses the MIME type from a filename extension using the data derived from /etc/mime.types in UNIX-type systems.",
"Imports": [
"tools"
],
"License": "GPL",
"URL": "https://github.com/yihui/mime",
"BugReports": "https://github.com/yihui/mime/issues",
"RoxygenNote": "7.1.1",
"Encoding": "UTF-8",
"NeedsCompilation": "yes",
"Author": "Yihui Xie [aut, cre] (<https://orcid.org/0000-0003-0645-5666>), Jeffrey Horner [ctb], Beilei Bian [ctb]",
"Maintainer": "Yihui Xie <xie@yihui.name>",
"Repository": "CRAN"
},
"miniUI": {
"Package": "miniUI",
"Version": "0.1.1.1",
"Source": "Repository",
"Type": "Package",
"Title": "Shiny UI Widgets for Small Screens",
"Authors@R": "c( person(\"Joe\", \"Cheng\", role = c(\"cre\", \"aut\"), email = \"joe@rstudio.com\"), person(family = \"RStudio\", role = \"cph\") )",
"Description": "Provides UI widget and layout functions for writing Shiny apps that work well on small screens.",
"License": "GPL-3",
"LazyData": "TRUE",
"Imports": [
"shiny (>= 0.13)",
"htmltools (>= 0.3)",
"utils"
],
"RoxygenNote": "5.0.1",
"NeedsCompilation": "no",
"Author": "Joe Cheng [cre, aut], RStudio [cph]",
"Maintainer": "Joe Cheng <joe@rstudio.com>",
"Repository": "CRAN",
"Encoding": "UTF-8"
},
"munsell": {
"Package": "munsell",
"Version": "0.5.1",
"Source": "Repository",
"Type": "Package",
"Title": "Utilities for Using Munsell Colours",
"Author": "Charlotte Wickham <cwickham@gmail.com>",
"Maintainer": "Charlotte Wickham <cwickham@gmail.com>",
"Description": "Provides easy access to, and manipulation of, the Munsell colours. Provides a mapping between Munsell's original notation (e.g. \"5R 5/10\") and hexadecimal strings suitable for use directly in R graphics. Also provides utilities to explore slices through the Munsell colour tree, to transform Munsell colours and display colour palettes.",
"Suggests": [
"ggplot2",
"testthat"
],
"Imports": [
"colorspace",
"methods"
],
"License": "MIT + file LICENSE",
"URL": "https://cran.r-project.org/package=munsell, https://github.com/cwickham/munsell/",
"RoxygenNote": "7.3.1",
"Encoding": "UTF-8",
"BugReports": "https://github.com/cwickham/munsell/issues",
"NeedsCompilation": "no",
"Repository": "CRAN"
},
"nlme": {
"Package": "nlme",
"Version": "3.1-167",
"Source": "Repository",
"Date": "2025-01-27",
"Priority": "recommended",
"Title": "Linear and Nonlinear Mixed Effects Models",
"Authors@R": "c(person(\"José\", \"Pinheiro\", role = \"aut\", comment = \"S version\"), person(\"Douglas\", \"Bates\", role = \"aut\", comment = \"up to 2007\"), person(\"Saikat\", \"DebRoy\", role = \"ctb\", comment = \"up to 2002\"), person(\"Deepayan\", \"Sarkar\", role = \"ctb\", comment = \"up to 2005\"), person(\"EISPACK authors\", role = \"ctb\", comment = \"src/rs.f\"), person(\"Siem\", \"Heisterkamp\", role = \"ctb\", comment = \"Author fixed sigma\"), person(\"Bert\", \"Van Willigen\",role = \"ctb\", comment = \"Programmer fixed sigma\"), person(\"Johannes\", \"Ranke\", role = \"ctb\", comment = \"varConstProp()\"), person(\"R Core Team\", email = \"R-core@R-project.org\", role = c(\"aut\", \"cre\"), comment = c(ROR = \"02zz1nj61\")))",
"Contact": "see 'MailingList'",
"Description": "Fit and compare Gaussian linear and nonlinear mixed-effects models.",
"Depends": [
"R (>= 3.6.0)"
],
"Imports": [
"graphics",
"stats",
"utils",
"lattice"
],
"Suggests": [
"MASS",
"SASmixed"
],
"LazyData": "yes",
"Encoding": "UTF-8",
"License": "GPL (>= 2)",
"BugReports": "https://bugs.r-project.org",
"MailingList": "R-help@r-project.org",
"URL": "https://svn.r-project.org/R-packages/trunk/nlme/",
"NeedsCompilation": "yes",
"Author": "José Pinheiro [aut] (S version), Douglas Bates [aut] (up to 2007), Saikat DebRoy [ctb] (up to 2002), Deepayan Sarkar [ctb] (up to 2005), EISPACK authors [ctb] (src/rs.f), Siem Heisterkamp [ctb] (Author fixed sigma), Bert Van Willigen [ctb] (Programmer fixed sigma), Johannes Ranke [ctb] (varConstProp()), R Core Team [aut, cre] (02zz1nj61)",
"Maintainer": "R Core Team <R-core@R-project.org>",
"Repository": "CRAN"
},
"openssl": {
"Package": "openssl",
"Version": "2.3.2",
"Source": "Repository",
"Type": "Package",
"Title": "Toolkit for Encryption, Signatures and Certificates Based on OpenSSL",
"Authors@R": "c(person(\"Jeroen\", \"Ooms\", role = c(\"aut\", \"cre\"), email = \"jeroenooms@gmail.com\", comment = c(ORCID = \"0000-0002-4035-0289\")), person(\"Oliver\", \"Keyes\", role = \"ctb\"))",
"Description": "Bindings to OpenSSL libssl and libcrypto, plus custom SSH key parsers. Supports RSA, DSA and EC curves P-256, P-384, P-521, and curve25519. Cryptographic signatures can either be created and verified manually or via x509 certificates. AES can be used in cbc, ctr or gcm mode for symmetric encryption; RSA for asymmetric (public key) encryption or EC for Diffie Hellman. High-level envelope functions combine RSA and AES for encrypting arbitrary sized data. Other utilities include key generators, hash functions (md5, sha1, sha256, etc), base64 encoder, a secure random number generator, and 'bignum' math methods for manually performing crypto calculations on large multibyte integers.",
"License": "MIT + file LICENSE",
"URL": "https://jeroen.r-universe.dev/openssl",
"BugReports": "https://github.com/jeroen/openssl/issues",
"SystemRequirements": "OpenSSL >= 1.0.2",
"VignetteBuilder": "knitr",
"Imports": [
"askpass"
],
"Suggests": [
"curl",
"testthat (>= 2.1.0)",
"digest",
"knitr",
"rmarkdown",
"jsonlite",
"jose",
"sodium"
],
"RoxygenNote": "7.3.2",
"Encoding": "UTF-8",
"NeedsCompilation": "yes",
"Author": "Jeroen Ooms [aut, cre] (<https://orcid.org/0000-0002-4035-0289>), Oliver Keyes [ctb]",
"Maintainer": "Jeroen Ooms <jeroenooms@gmail.com>",
"Repository": "CRAN"
},
"openxlsx": {
"Package": "openxlsx",
"Version": "4.2.8",
"Source": "Repository",
"Type": "Package",
"Title": "Read, Write and Edit xlsx Files",
"Date": "2025-01-25",
"Authors@R": "c(person(given = \"Philipp\", family = \"Schauberger\", role = \"aut\", email = \"philipp@schauberger.co.at\"), person(given = \"Alexander\", family = \"Walker\", role = \"aut\", email = \"Alexander.Walker1989@gmail.com\"), person(given = \"Luca\", family = \"Braglia\", role = \"ctb\"), person(given = \"Joshua\", family = \"Sturm\", role = \"ctb\"), person(given = \"Jan Marvin\", family = \"Garbuszus\", role = c(\"ctb\", \"cre\"), email = \"jan.garbuszus@ruhr-uni-bochum.de\"), person(given = \"Jordan Mark\", family = \"Barbone\", role = \"ctb\", email = \"jmbarbone@gmail.com\", comment = c(ORCID = \"0000-0001-9788-3628\")), person(given = \"David\", family = \"Zimmermann\", role = \"ctb\", email = \"david_j_zimmermann@hotmail.com\"), person(given = \"Reinhold\", family = \"Kainhofer\", role = \"ctb\", email = \"reinhold@kainhofer.com\"))",
"Description": "Simplifies the creation of Excel .xlsx files by providing a high level interface to writing, styling and editing worksheets. Through the use of 'Rcpp', read/write times are comparable to the 'xlsx' and 'XLConnect' packages with the added benefit of removing the dependency on Java.",
"License": "MIT + file LICENSE",
"URL": "https://ycphs.github.io/openxlsx/index.html, https://github.com/ycphs/openxlsx",
"BugReports": "https://github.com/ycphs/openxlsx/issues",
"Depends": [
"R (>= 3.3.0)"
],
"Imports": [
"grDevices",
"methods",
"Rcpp",
"stats",
"stringi",
"utils",
"zip"
],
"Suggests": [
"curl",
"formula.tools",
"knitr",
"rmarkdown",
"testthat"
],
"LinkingTo": [
"Rcpp"
],
"VignetteBuilder": "knitr",
"Encoding": "UTF-8",
"Language": "en-US",
"RoxygenNote": "7.3.2",
"Collate": "'CommentClass.R' 'HyperlinkClass.R' 'RcppExports.R' 'class_definitions.R' 'StyleClass.R' 'WorkbookClass.R' 'asserts.R' 'baseXML.R' 'borderFunctions.R' 'build_workbook.R' 'chartsheet_class.R' 'conditional_formatting.R' 'data-fontSizeLookupTables.R' 'helperFunctions.R' 'loadWorkbook.R' 'onUnload.R' 'openXL.R' 'openxlsx-package.R' 'openxlsx.R' 'openxlsxCoerce.R' 'readWorkbook.R' 'setWindowSize.R' 'sheet_data_class.R' 'utils.R' 'workbook_column_widths.R' 'workbook_read_workbook.R' 'workbook_write_data.R' 'worksheet_class.R' 'wrappers.R' 'writeData.R' 'writeDataTable.R' 'writexlsx.R' 'zzz.R'",
"LazyData": "true",
"NeedsCompilation": "yes",
"Author": "Philipp Schauberger [aut], Alexander Walker [aut], Luca Braglia [ctb], Joshua Sturm [ctb], Jan Marvin Garbuszus [ctb, cre], Jordan Mark Barbone [ctb] (<https://orcid.org/0000-0001-9788-3628>), David Zimmermann [ctb], Reinhold Kainhofer [ctb]",
"Maintainer": "Jan Marvin Garbuszus <jan.garbuszus@ruhr-uni-bochum.de>",
"Repository": "CRAN"
},
"parallelly": {
"Package": "parallelly",
"Version": "1.42.0",
"Source": "Repository",
"Title": "Enhancing the 'parallel' Package",
"Imports": [
"parallel",
"tools",
"utils"
],
"Suggests": [
"commonmark",
"base64enc"
],
"VignetteBuilder": "parallelly",
"Authors@R": "c( person(\"Henrik\", \"Bengtsson\", role = c(\"aut\", \"cre\", \"cph\"), email = \"henrikb@braju.com\", comment = c(ORCID = \"0000-0002-7579-5165\")), person(\"Mike\", \"Cheng\", role = c(\"ctb\"), email = \"mikefc@coolbutuseless.com\") )",
"Description": "Utility functions that enhance the 'parallel' package and support the built-in parallel backends of the 'future' package. For example, availableCores() gives the number of CPU cores available to your R process as given by the operating system, 'cgroups' and Linux containers, R options, and environment variables, including those set by job schedulers on high-performance compute clusters. If none is set, it will fall back to parallel::detectCores(). Another example is makeClusterPSOCK(), which is backward compatible with parallel::makePSOCKcluster() while doing a better job in setting up remote cluster workers without the need for configuring the firewall to do port-forwarding to your local computer.",
"License": "LGPL (>= 2.1)",
"LazyLoad": "TRUE",
"ByteCompile": "TRUE",
"URL": "https://parallelly.futureverse.org, https://github.com/futureverse/parallelly",
"BugReports": "https://github.com/futureverse/parallelly/issues",
"Encoding": "UTF-8",
"RoxygenNote": "7.3.2",
"NeedsCompilation": "yes",
"Author": "Henrik Bengtsson [aut, cre, cph] (<https://orcid.org/0000-0002-7579-5165>), Mike Cheng [ctb]",
"Maintainer": "Henrik Bengtsson <henrikb@braju.com>",
"Repository": "CRAN"
},
"patchwork": {
"Package": "patchwork",
"Version": "1.3.0",
"Source": "Repository",
"Type": "Package",
"Title": "The Composer of Plots",
"Authors@R": "person(given = \"Thomas Lin\", family = \"Pedersen\", role = c(\"cre\", \"aut\"), email = \"thomasp85@gmail.com\", comment = c(ORCID = \"0000-0002-5147-4711\"))",
"Maintainer": "Thomas Lin Pedersen <thomasp85@gmail.com>",
"Description": "The 'ggplot2' package provides a strong API for sequentially building up a plot, but does not concern itself with composition of multiple plots. 'patchwork' is a package that expands the API to allow for arbitrarily complex composition of plots by, among others, providing mathematical operators for combining multiple plots. Other packages that try to address this need (but with a different approach) are 'gridExtra' and 'cowplot'.",
"License": "MIT + file LICENSE",
"Encoding": "UTF-8",
"Imports": [
"ggplot2 (>= 3.0.0)",
"gtable",
"grid",
"stats",
"grDevices",
"utils",
"graphics",
"rlang (>= 1.0.0)",
"cli",
"farver"
],
"RoxygenNote": "7.3.2",
"URL": "https://patchwork.data-imaginist.com, https://github.com/thomasp85/patchwork",
"BugReports": "https://github.com/thomasp85/patchwork/issues",
"Suggests": [
"knitr",
"rmarkdown",
"gridGraphics",
"gridExtra",
"ragg",
"testthat (>= 2.1.0)",
"vdiffr",
"covr",
"png",
"gt (>= 0.11.0)"
],
"VignetteBuilder": "knitr",
"Config/Needs/website": "gifski",
"NeedsCompilation": "no",
"Author": "Thomas Lin Pedersen [cre, aut] (<https://orcid.org/0000-0002-5147-4711>)",
"Repository": "CRAN"
},
"pbapply": {
"Package": "pbapply",
"Version": "1.7-2",
"Source": "Repository",
"Type": "Package",
"Title": "Adding Progress Bar to '*apply' Functions",
"Date": "2023-06-27",
"Authors@R": "c(person(given = \"Peter\", family = \"Solymos\", comment = c(ORCID = \"0000-0001-7337-1740\"), role = c(\"aut\", \"cre\"), email = \"psolymos@gmail.com\"), person(given = \"Zygmunt\", family = \"Zawadzki\", role = \"aut\", email = \"zygmunt@zstat.pl\"), person(given = \"Henrik\", family = \"Bengtsson\", role = \"ctb\", email = \"henrikb@braju.com\"), person(\"R Core Team\", role = c(\"cph\", \"ctb\")))",
"Maintainer": "Peter Solymos <psolymos@gmail.com>",
"Description": "A lightweight package that adds progress bar to vectorized R functions ('*apply'). The implementation can easily be added to functions where showing the progress is useful (e.g. bootstrap). The type and style of the progress bar (with percentages or remaining time) can be set through options. Supports several parallel processing backends including future.",
"Depends": [
"R (>= 3.2.0)"
],
"Imports": [
"parallel"
],
"Suggests": [
"shiny",
"future",
"future.apply"
],
"License": "GPL (>= 2)",
"URL": "https://github.com/psolymos/pbapply",
"BugReports": "https://github.com/psolymos/pbapply/issues",
"NeedsCompilation": "no",
"Author": "Peter Solymos [aut, cre] (<https://orcid.org/0000-0001-7337-1740>), Zygmunt Zawadzki [aut], Henrik Bengtsson [ctb], R Core Team [cph, ctb]",
"Repository": "CRAN",
"Encoding": "UTF-8"
},
"pheatmap": {
"Package": "pheatmap",
"Version": "1.0.12",
"Source": "Repository",
"Type": "Package",
"Title": "Pretty Heatmaps",
"Date": "2018-12-26",
"Author": "Raivo Kolde",
"Maintainer": "Raivo Kolde <rkolde@gmail.com>",
"Depends": [
"R (>= 2.0)"
],
"Description": "Implementation of heatmaps that offers more control over dimensions and appearance.",
"Imports": [
"grid",
"RColorBrewer",
"scales",
"gtable",
"stats",
"grDevices",
"graphics"
],
"License": "GPL-2",
"LazyLoad": "yes",
"RoxygenNote": "6.0.1",
"NeedsCompilation": "no",
"Repository": "CRAN",
"Encoding": "UTF-8"
},
"pillar": {
"Package": "pillar",
"Version": "1.10.1",
"Source": "Repository",
"Title": "Coloured Formatting for Columns",
"Authors@R": "c(person(given = \"Kirill\", family = \"M\\u00fcller\", role = c(\"aut\", \"cre\"), email = \"kirill@cynkra.com\", comment = c(ORCID = \"0000-0002-1416-3412\")), person(given = \"Hadley\", family = \"Wickham\", role = \"aut\"), person(given = \"RStudio\", role = \"cph\"))",
"Description": "Provides 'pillar' and 'colonnade' generics designed for formatting columns of data using the full range of colours provided by modern terminals.",
"License": "MIT + file LICENSE",
"URL": "https://pillar.r-lib.org/, https://github.com/r-lib/pillar",
"BugReports": "https://github.com/r-lib/pillar/issues",
"Imports": [
"cli (>= 2.3.0)",
"glue",
"lifecycle",
"rlang (>= 1.0.2)",
"utf8 (>= 1.1.0)",
"utils",
"vctrs (>= 0.5.0)"
],
"Suggests": [
"bit64",
"DBI",
"debugme",
"DiagrammeR",
"dplyr",
"formattable",
"ggplot2",
"knitr",
"lubridate",
"nanotime",
"nycflights13",
"palmerpenguins",
"rmarkdown",
"scales",
"stringi",
"survival",
"testthat (>= 3.1.1)",
"tibble",
"units (>= 0.7.2)",
"vdiffr",
"withr"
],
"VignetteBuilder": "knitr",
"Encoding": "UTF-8",
"RoxygenNote": "7.3.2.9000",
"Config/testthat/edition": "3",
"Config/testthat/parallel": "true",
"Config/testthat/start-first": "format_multi_fuzz, format_multi_fuzz_2, format_multi, ctl_colonnade, ctl_colonnade_1, ctl_colonnade_2",
"Config/autostyle/scope": "line_breaks",
"Config/autostyle/strict": "true",
"Config/gha/extra-packages": "DiagrammeR=?ignore-before-r=3.5.0",
"Config/Needs/website": "tidyverse/tidytemplate",
"NeedsCompilation": "no",
"Author": "Kirill Müller [aut, cre] (<https://orcid.org/0000-0002-1416-3412>), Hadley Wickham [aut], RStudio [cph]",
"Maintainer": "Kirill Müller <kirill@cynkra.com>",
"Repository": "CRAN"
},
"pkgbuild": {
"Package": "pkgbuild",
"Version": "1.4.6",
"Source": "Repository",
"Title": "Find Tools Needed to Build R Packages",
"Authors@R": "c( person(\"Hadley\", \"Wickham\", role = \"aut\"), person(\"Jim\", \"Hester\", role = \"aut\"), person(\"Gábor\", \"Csárdi\", , \"csardi.gabor@gmail.com\", role = c(\"aut\", \"cre\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "Provides functions used to build R packages. Locates compilers needed to build R packages on various platforms and ensures the PATH is configured appropriately so R can use them.",
"License": "MIT + file LICENSE",
"URL": "https://github.com/r-lib/pkgbuild, https://pkgbuild.r-lib.org",
"BugReports": "https://github.com/r-lib/pkgbuild/issues",
"Depends": [
"R (>= 3.5)"
],
"Imports": [
"callr (>= 3.2.0)",
"cli (>= 3.4.0)",
"desc",
"processx",
"R6"
],
"Suggests": [
"covr",
"cpp11",
"knitr",
"Rcpp",
"rmarkdown",
"testthat (>= 3.2.0)",
"withr (>= 2.3.0)"
],
"Config/Needs/website": "tidyverse/tidytemplate",
"Config/testthat/edition": "3",
"Encoding": "UTF-8",
"RoxygenNote": "7.3.2",
"NeedsCompilation": "no",
"Author": "Hadley Wickham [aut], Jim Hester [aut], Gábor Csárdi [aut, cre], Posit Software, PBC [cph, fnd]",
"Maintainer": "Gábor Csárdi <csardi.gabor@gmail.com>",
"Repository": "CRAN"
},
"pkgconfig": {
"Package": "pkgconfig",
"Version": "2.0.3",
"Source": "Repository",
"Title": "Private Configuration for 'R' Packages",
"Author": "Gábor Csárdi",
"Maintainer": "Gábor Csárdi <csardi.gabor@gmail.com>",
"Description": "Set configuration options on a per-package basis. Options set by a given package only apply to that package, other packages are unaffected.",
"License": "MIT + file LICENSE",
"LazyData": "true",
"Imports": [
"utils"
],
"Suggests": [
"covr",
"testthat",
"disposables (>= 1.0.3)"
],
"URL": "https://github.com/r-lib/pkgconfig#readme",
"BugReports": "https://github.com/r-lib/pkgconfig/issues",
"Encoding": "UTF-8",
"NeedsCompilation": "no",
"Repository": "CRAN"
},
"pkgdown": {
"Package": "pkgdown",
"Version": "2.1.1",
"Source": "Repository",
"Title": "Make Static HTML Documentation for a Package",
"Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Jay\", \"Hesselberth\", role = \"aut\", comment = c(ORCID = \"0000-0002-6299-179X\")), person(\"Maëlle\", \"Salmon\", role = \"aut\", comment = c(ORCID = \"0000-0002-2815-0399\")), person(\"Olivier\", \"Roy\", role = \"aut\"), person(\"Salim\", \"Brüggemann\", role = \"aut\", comment = c(ORCID = \"0000-0002-5329-5987\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "Generate an attractive and useful website from a source package. 'pkgdown' converts your documentation, vignettes, 'README', and more to 'HTML' making it easy to share information about your package online.",
"License": "MIT + file LICENSE",
"URL": "https://pkgdown.r-lib.org/, https://github.com/r-lib/pkgdown",
"BugReports": "https://github.com/r-lib/pkgdown/issues",
"Depends": [
"R (>= 4.0.0)"
],
"Imports": [
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"callr (>= 3.7.3)",
"cli (>= 3.6.1)",
"desc (>= 1.4.0)",
"digest",
"downlit (>= 0.4.4)",
"fontawesome",
"fs (>= 1.4.0)",
"httr2 (>= 1.0.2)",
"jsonlite",
"openssl",
"purrr (>= 1.0.0)",
"ragg",
"rlang (>= 1.1.0)",
"rmarkdown (>= 2.27)",
"tibble",
"whisker",
"withr (>= 2.4.3)",
"xml2 (>= 1.3.1)",
"yaml"
],
"Suggests": [
"covr",
"diffviewer",
"evaluate (>= 0.24.0)",
"gert",
"gt",
"htmltools",
"htmlwidgets",
"knitr",
"lifecycle",
"magick",
"methods",
"pkgload (>= 1.0.2)",
"quarto",
"rsconnect",
"rstudioapi",
"rticles",
"sass",
"testthat (>= 3.1.3)",
"tools"
],
"VignetteBuilder": "knitr, quarto",
"Config/Needs/website": "usethis, servr",
"Config/potools/style": "explicit",
"Config/testthat/edition": "3",
"Config/testthat/parallel": "true",
"Config/testthat/start-first": "build-article, build-quarto-article, build-reference",
"Encoding": "UTF-8",
"RoxygenNote": "7.3.2",
"SystemRequirements": "pandoc",
"NeedsCompilation": "no",
"Author": "Hadley Wickham [aut, cre] (<https://orcid.org/0000-0003-4757-117X>), Jay Hesselberth [aut] (<https://orcid.org/0000-0002-6299-179X>), Maëlle Salmon [aut] (<https://orcid.org/0000-0002-2815-0399>), Olivier Roy [aut], Salim Brüggemann [aut] (<https://orcid.org/0000-0002-5329-5987>), Posit Software, PBC [cph, fnd]",
"Maintainer": "Hadley Wickham <hadley@posit.co>",
"Repository": "CRAN"
},
"pkgload": {
"Package": "pkgload",
"Version": "1.4.0",
"Source": "Repository",
"Title": "Simulate Package Installation and Attach",
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"Description": "Simulates the process of installing a package and then attaching it. This is a key part of the 'devtools' package as it allows you to rapidly iterate while developing a package.",
"License": "GPL-3",
"URL": "https://github.com/r-lib/pkgload, https://pkgload.r-lib.org",
"BugReports": "https://github.com/r-lib/pkgload/issues",
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],
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"lifecycle",
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"rlang (>= 1.1.1)",
"rprojroot",
"utils",
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"jsonlite",
"mathjaxr",
"pak",
"Rcpp",
"remotes",
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"Source": "Repository",
"Title": "Create Interactive Web Graphics via 'plotly.js'",
"Authors@R": "c(person(\"Carson\", \"Sievert\", role = c(\"aut\", \"cre\"), email = \"cpsievert1@gmail.com\", comment = c(ORCID = \"0000-0002-4958-2844\")), person(\"Chris\", \"Parmer\", role = \"aut\", email = \"chris@plot.ly\"), person(\"Toby\", \"Hocking\", role = \"aut\", email = \"tdhock5@gmail.com\"), person(\"Scott\", \"Chamberlain\", role = \"aut\", email = \"myrmecocystus@gmail.com\"), person(\"Karthik\", \"Ram\", role = \"aut\", email = \"karthik.ram@gmail.com\"), person(\"Marianne\", \"Corvellec\", role = \"aut\", email = \"marianne.corvellec@igdore.org\", comment = c(ORCID = \"0000-0002-1994-3581\")), person(\"Pedro\", \"Despouy\", role = \"aut\", email = \"pedro@plot.ly\"), person(\"Salim\", \"Brüggemann\", role = \"ctb\", email = \"salim-b@pm.me\", comment = c(ORCID = \"0000-0002-5329-5987\")), person(\"Plotly Technologies Inc.\", role = \"cph\"))",
"License": "MIT + file LICENSE",
"Description": "Create interactive web graphics from 'ggplot2' graphs and/or a custom interface to the (MIT-licensed) JavaScript library 'plotly.js' inspired by the grammar of graphics.",
"URL": "https://plotly-r.com, https://github.com/plotly/plotly.R, https://plotly.com/r/",
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"htmlwidgets (>= 1.5.2.9001)",
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"RColorBrewer",
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"vctrs",
"tibble",
"lazyeval (>= 0.2.0)",
"rlang (>= 0.4.10)",
"crosstalk",
"purrr",
"data.table",
"promises"
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"maps",
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"ggthemes",
"GGally",
"ggalluvial",
"testthat",
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"shinytest (>= 1.3.0)",
"curl",
"rmarkdown",
"Cairo",
"broom",
"webshot",
"listviewer",
"dendextend",
"sf",
"png",
"IRdisplay",
"processx",
"plotlyGeoAssets",
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"Author": "Carson Sievert [aut, cre] (<https://orcid.org/0000-0002-4958-2844>), Chris Parmer [aut], Toby Hocking [aut], Scott Chamberlain [aut], Karthik Ram [aut], Marianne Corvellec [aut] (<https://orcid.org/0000-0002-1994-3581>), Pedro Despouy [aut], Salim Brüggemann [ctb] (<https://orcid.org/0000-0002-5329-5987>), Plotly Technologies Inc. [cph]",
"Maintainer": "Carson Sievert <cpsievert1@gmail.com>",
"Repository": "CRAN"
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"Version": "1.8.9",
"Source": "Repository",
"Title": "Tools for Splitting, Applying and Combining Data",
"Authors@R": "person(\"Hadley\", \"Wickham\", , \"hadley@rstudio.com\", role = c(\"aut\", \"cre\"))",
"Description": "A set of tools that solves a common set of problems: you need to break a big problem down into manageable pieces, operate on each piece and then put all the pieces back together. For example, you might want to fit a model to each spatial location or time point in your study, summarise data by panels or collapse high-dimensional arrays to simpler summary statistics. The development of 'plyr' has been generously supported by 'Becton Dickinson'.",
"License": "MIT + file LICENSE",
"URL": "http://had.co.nz/plyr, https://github.com/hadley/plyr",
"BugReports": "https://github.com/hadley/plyr/issues",
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],
"Imports": [
"Rcpp (>= 0.11.0)"
],
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"abind",
"covr",
"doParallel",
"foreach",
"iterators",
"itertools",
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"testthat"
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],
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"Version": "0.1-8",
"Source": "Repository",
"Title": "Read and write PNG images",
"Author": "Simon Urbanek <Simon.Urbanek@r-project.org>",
"Maintainer": "Simon Urbanek <Simon.Urbanek@r-project.org>",
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"R (>= 2.9.0)"
],
"Description": "This package provides an easy and simple way to read, write and display bitmap images stored in the PNG format. It can read and write both files and in-memory raw vectors.",
"License": "GPL-2 | GPL-3",
"SystemRequirements": "libpng",
"URL": "http://www.rforge.net/png/",
"NeedsCompilation": "yes",
"Repository": "CRAN",
"Encoding": "UTF-8"
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"Version": "1.10-7",
"Source": "Repository",
"Date": "2024-07-23",
"Title": "Polygon Clipping",
"Authors@R": "c(person(\"Angus\", \"Johnson\", role = \"aut\", comment=\"C++ original, http://www.angusj.com/delphi/clipper.php\"), person(\"Adrian\", \"Baddeley\", role = c(\"aut\", \"trl\", \"cre\"), email = \"Adrian.Baddeley@curtin.edu.au\"), person(\"Kurt\", \"Hornik\", role = \"ctb\"), person(c(\"Brian\", \"D.\"), \"Ripley\", role = \"ctb\"), person(\"Elliott\", \"Sales de Andrade\", role=\"ctb\"), person(\"Paul\", \"Murrell\", role = \"ctb\"), person(\"Ege\", \"Rubak\", role=\"ctb\"), person(\"Mark\", \"Padgham\", role=\"ctb\"))",
"Maintainer": "Adrian Baddeley <Adrian.Baddeley@curtin.edu.au>",
"Depends": [
"R (>= 3.5.0)"
],
"Description": "R port of Angus Johnson's open source library 'Clipper'. Performs polygon clipping operations (intersection, union, set minus, set difference) for polygonal regions of arbitrary complexity, including holes. Computes offset polygons (spatial buffer zones, morphological dilations, Minkowski dilations) for polygonal regions and polygonal lines. Computes Minkowski Sum of general polygons. There is a function for removing self-intersections from polygon data.",
"License": "BSL",
"URL": "https://www.angusj.com, https://sourceforge.net/projects/polyclipping, https://github.com/baddstats/polyclip",
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"Source": "Repository",
"Title": "Praise Users",
"Author": "Gabor Csardi, Sindre Sorhus",
"Maintainer": "Gabor Csardi <csardi.gabor@gmail.com>",
"Description": "Build friendly R packages that praise their users if they have done something good, or they just need it to feel better.",
"License": "MIT + file LICENSE",
"LazyData": "true",
"URL": "https://github.com/gaborcsardi/praise",
"BugReports": "https://github.com/gaborcsardi/praise/issues",
"Suggests": [
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"Version": "1.0.0",
"Source": "GitHub",
"Title": "Fast Functions for Differential Expression using Wilcox and AUC",
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"Description": "Scalable implementation of the Wilcoxon rank sum test and auROC statistic. Interfaces to dense and sparse matrices, as well as genomics analysis frameworks Seurat and SingleCellExperiment.",
"License": "GPL-3",
"LazyData": "true",
"Encoding": "UTF-8",
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"Rcpp",
"data.table"
],
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"RcppArmadillo"
],
"biocViews": "",
"Imports": [
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"methods",
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"purrr",
"tibble",
"Matrix",
"rlang",
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],
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"SummarizedExperiment",
"broom",
"BiocStyle",
"DESeq2"
],
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"VignetteBuilder": "knitr",
"Author": "Ilya Korsunsky [aut] (<https://orcid.org/0000-0003-4848-3948>), Aparna Nathan [aut], Nghia Millard [aut] (<https://orcid.org/0000-0002-0518-7674>), Soumya Raychaudhuri [aut] (<https://orcid.org/0000-0002-1901-8265>), Kamil Slowikowski [cre, ctb] (<https://orcid.org/0000-0002-2843-6370>), Austin Hartman [ctb] (<https://orcid.org/0000-0001-7278-1852>)",
"Maintainer": "Kamil Slowikowski <kslowikowski@gmail.com>",
"RemoteType": "github",
"RemoteHost": "api.github.com",
"RemoteUsername": "immunogenomics",
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"Version": "1.2.0",
"Source": "Repository",
"Title": "Pretty, Human Readable Formatting of Quantities",
"Authors@R": "c( person(\"Gabor\", \"Csardi\", email=\"csardi.gabor@gmail.com\", role=c(\"aut\", \"cre\")), person(\"Bill\", \"Denney\", email=\"wdenney@humanpredictions.com\", role=c(\"ctb\"), comment=c(ORCID=\"0000-0002-5759-428X\")), person(\"Christophe\", \"Regouby\", email=\"christophe.regouby@free.fr\", role=c(\"ctb\")) )",
"Description": "Pretty, human readable formatting of quantities. Time intervals: '1337000' -> '15d 11h 23m 20s'. Vague time intervals: '2674000' -> 'about a month ago'. Bytes: '1337' -> '1.34 kB'. Rounding: '99' with 3 significant digits -> '99.0' p-values: '0.00001' -> '<0.0001'. Colors: '#FF0000' -> 'red'. Quantities: '1239437' -> '1.24 M'.",
"License": "MIT + file LICENSE",
"URL": "https://github.com/r-lib/prettyunits",
"BugReports": "https://github.com/r-lib/prettyunits/issues",
"Depends": [
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],
"Suggests": [
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"covr",
"testthat"
],
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"NeedsCompilation": "no",
"Author": "Gabor Csardi [aut, cre], Bill Denney [ctb] (<https://orcid.org/0000-0002-5759-428X>), Christophe Regouby [ctb]",
"Maintainer": "Gabor Csardi <csardi.gabor@gmail.com>",
"Repository": "CRAN"
},
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"Version": "3.8.6",
"Source": "Repository",
"Title": "Execute and Control System Processes",
"Authors@R": "c( person(\"Gábor\", \"Csárdi\", , \"csardi.gabor@gmail.com\", role = c(\"aut\", \"cre\", \"cph\"), comment = c(ORCID = \"0000-0001-7098-9676\")), person(\"Winston\", \"Chang\", role = \"aut\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")), person(\"Ascent Digital Services\", role = c(\"cph\", \"fnd\")) )",
"Description": "Tools to run system processes in the background. It can check if a background process is running; wait on a background process to finish; get the exit status of finished processes; kill background processes. It can read the standard output and error of the processes, using non-blocking connections. 'processx' can poll a process for standard output or error, with a timeout. It can also poll several processes at once.",
"License": "MIT + file LICENSE",
"URL": "https://processx.r-lib.org, https://github.com/r-lib/processx",
"BugReports": "https://github.com/r-lib/processx/issues",
"Depends": [
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],
"Imports": [
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"R6",
"utils"
],
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"cli (>= 3.3.0)",
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"covr",
"curl",
"debugme",
"parallel",
"rlang (>= 1.0.2)",
"testthat (>= 3.0.0)",
"webfakes",
"withr"
],
"Config/Needs/website": "tidyverse/tidytemplate",
"Config/testthat/edition": "3",
"Encoding": "UTF-8",
"RoxygenNote": "7.3.1.9000",
"NeedsCompilation": "yes",
"Author": "Gábor Csárdi [aut, cre, cph] (<https://orcid.org/0000-0001-7098-9676>), Winston Chang [aut], Posit Software, PBC [cph, fnd], Ascent Digital Services [cph, fnd]",
"Maintainer": "Gábor Csárdi <csardi.gabor@gmail.com>",
"Repository": "CRAN"
},
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"Version": "0.4.0",
"Source": "Repository",
"Title": "Interactive Visualizations for Profiling R Code",
"Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\")), person(\"Winston\", \"Chang\", role = \"aut\"), person(\"Javier\", \"Luraschi\", role = \"aut\"), person(\"Timothy\", \"Mastny\", role = \"aut\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")), person(, \"jQuery Foundation\", role = \"cph\", comment = \"jQuery library\"), person(, \"jQuery contributors\", role = c(\"ctb\", \"cph\"), comment = \"jQuery library; authors listed in inst/htmlwidgets/lib/jquery/AUTHORS.txt\"), person(\"Mike\", \"Bostock\", role = c(\"ctb\", \"cph\"), comment = \"D3 library\"), person(, \"D3 contributors\", role = \"ctb\", comment = \"D3 library\"), person(\"Ivan\", \"Sagalaev\", role = c(\"ctb\", \"cph\"), comment = \"highlight.js library\") )",
"Description": "Interactive visualizations for profiling R code.",
"License": "MIT + file LICENSE",
"URL": "https://profvis.r-lib.org, https://github.com/r-lib/profvis",
"BugReports": "https://github.com/r-lib/profvis/issues",
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],
"Imports": [
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"rlang (>= 1.1.0)",
"vctrs"
],
"Suggests": [
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"knitr",
"rmarkdown",
"shiny",
"testthat (>= 3.0.0)"
],
"VignetteBuilder": "knitr",
"Config/Needs/website": "tidyverse/tidytemplate, rmarkdown",
"Config/testthat/edition": "3",
"Encoding": "UTF-8",
"RoxygenNote": "7.3.2",
"NeedsCompilation": "yes",
"Author": "Hadley Wickham [aut, cre], Winston Chang [aut], Javier Luraschi [aut], Timothy Mastny [aut], Posit Software, PBC [cph, fnd], jQuery Foundation [cph] (jQuery library), jQuery contributors [ctb, cph] (jQuery library; authors listed in inst/htmlwidgets/lib/jquery/AUTHORS.txt), Mike Bostock [ctb, cph] (D3 library), D3 contributors [ctb] (D3 library), Ivan Sagalaev [ctb, cph] (highlight.js library)",
"Maintainer": "Hadley Wickham <hadley@posit.co>",
"Repository": "CRAN"
},
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"Package": "progress",
"Version": "1.2.3",
"Source": "Repository",
"Title": "Terminal Progress Bars",
"Authors@R": "c( person(\"Gábor\", \"Csárdi\", , \"csardi.gabor@gmail.com\", role = c(\"aut\", \"cre\")), person(\"Rich\", \"FitzJohn\", role = \"aut\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "Configurable Progress bars, they may include percentage, elapsed time, and/or the estimated completion time. They work in terminals, in 'Emacs' 'ESS', 'RStudio', 'Windows' 'Rgui' and the 'macOS' 'R.app'. The package also provides a 'C++' 'API', that works with or without 'Rcpp'.",
"License": "MIT + file LICENSE",
"URL": "https://github.com/r-lib/progress#readme, http://r-lib.github.io/progress/",
"BugReports": "https://github.com/r-lib/progress/issues",
"Depends": [
"R (>= 3.6)"
],
"Imports": [
"crayon",
"hms",
"prettyunits",
"R6"
],
"Suggests": [
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"testthat (>= 3.0.0)",
"withr"
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"Config/Needs/website": "tidyverse/tidytemplate",
"Config/testthat/edition": "3",
"Encoding": "UTF-8",
"RoxygenNote": "7.2.3",
"NeedsCompilation": "no",
"Author": "Gábor Csárdi [aut, cre], Rich FitzJohn [aut], Posit Software, PBC [cph, fnd]",
"Maintainer": "Gábor Csárdi <csardi.gabor@gmail.com>",
"Repository": "CRAN"
},
"progressr": {
"Package": "progressr",
"Version": "0.15.1",
"Source": "Repository",
"Title": "An Inclusive, Unifying API for Progress Updates",
"Description": "A minimal, unifying API for scripts and packages to report progress updates from anywhere including when using parallel processing. The package is designed such that the developer can to focus on what progress should be reported on without having to worry about how to present it. The end user has full control of how, where, and when to render these progress updates, e.g. in the terminal using utils::txtProgressBar(), cli::cli_progress_bar(), in a graphical user interface using utils::winProgressBar(), tcltk::tkProgressBar() or shiny::withProgress(), via the speakers using beepr::beep(), or on a file system via the size of a file. Anyone can add additional, customized, progression handlers. The 'progressr' package uses R's condition framework for signaling progress updated. Because of this, progress can be reported from almost anywhere in R, e.g. from classical for and while loops, from map-reduce API:s like the lapply() family of functions, 'purrr', 'plyr', and 'foreach'. It will also work with parallel processing via the 'future' framework, e.g. future.apply::future_lapply(), furrr::future_map(), and 'foreach' with 'doFuture'. The package is compatible with Shiny applications.",
"Authors@R": "c(person(\"Henrik\", \"Bengtsson\", role = c(\"aut\", \"cre\", \"cph\"), email = \"henrikb@braju.com\", comment = c(ORCID = \"0000-0002-7579-5165\")))",
"License": "GPL (>= 3)",
"Depends": [
"R (>= 3.5.0)"
],
"Imports": [
"digest",
"utils"
],
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"tcltk",
"beepr",
"cli",
"crayon",
"pbmcapply",
"progress",
"purrr",
"foreach",
"plyr",
"doFuture",
"future",
"future.apply",
"furrr",
"ntfy",
"RPushbullet",
"rstudioapi",
"shiny",
"commonmark",
"base64enc",
"tools"
],
"VignetteBuilder": "progressr",
"URL": "https://progressr.futureverse.org, https://github.com/futureverse/progressr",
"BugReports": "https://github.com/futureverse/progressr/issues",
"RoxygenNote": "7.3.2",
"NeedsCompilation": "no",
"Author": "Henrik Bengtsson [aut, cre, cph] (<https://orcid.org/0000-0002-7579-5165>)",
"Maintainer": "Henrik Bengtsson <henrikb@braju.com>",
"Repository": "CRAN",
"Encoding": "UTF-8"
},
"promises": {
"Package": "promises",
"Version": "1.3.2",
"Source": "Repository",
"Type": "Package",
"Title": "Abstractions for Promise-Based Asynchronous Programming",
"Authors@R": "c( person(\"Joe\", \"Cheng\", , \"joe@posit.co\", role = c(\"aut\", \"cre\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "Provides fundamental abstractions for doing asynchronous programming in R using promises. Asynchronous programming is useful for allowing a single R process to orchestrate multiple tasks in the background while also attending to something else. Semantics are similar to 'JavaScript' promises, but with a syntax that is idiomatic R.",
"License": "MIT + file LICENSE",
"URL": "https://rstudio.github.io/promises/, https://github.com/rstudio/promises",
"BugReports": "https://github.com/rstudio/promises/issues",
"Imports": [
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"later",
"magrittr (>= 1.5)",
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"Rcpp",
"rlang",
"stats"
],
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"knitr",
"purrr",
"rmarkdown",
"spelling",
"testthat",
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],
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"VignetteBuilder": "knitr",
"Config/Needs/website": "rsconnect",
"Encoding": "UTF-8",
"Language": "en-US",
"RoxygenNote": "7.3.2",
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"Author": "Joe Cheng [aut, cre], Posit Software, PBC [cph, fnd]",
"Maintainer": "Joe Cheng <joe@posit.co>",
"Repository": "CRAN"
},
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"URL": "https://github.com/r-lib/ps, https://ps.r-lib.org/",
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"Description": "Anti-Grain Geometry (AGG) is a high-quality and high-performance 2D drawing library. The 'ragg' package provides a set of graphic devices based on AGG to use as alternative to the raster devices provided through the 'grDevices' package.",
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"URL": "https://ragg.r-lib.org, https://github.com/r-lib/ragg",
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"Description": "An easy way to determine which directories on the users computer you should use to save data, caches and logs. A port of Python's 'Appdirs' (<https://github.com/ActiveState/appdirs>) to R.",
"License": "MIT + file LICENSE",
"URL": "https://rappdirs.r-lib.org, https://github.com/r-lib/rappdirs",
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"Copyright": "Original python appdirs module copyright (c) 2010 ActiveState Software Inc. R port copyright Hadley Wickham, RStudio. See file LICENSE for details.",
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"Description": "Run 'R CMD check' from 'R' and capture the results of the individual checks. Supports running checks in the background, timeouts, pretty printing and comparing check results.",
"License": "MIT + file LICENSE",
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"License": "MIT + file LICENSE",
"URL": "https://readr.tidyverse.org, https://github.com/tidyverse/readr",
"BugReports": "https://github.com/tidyverse/readr/issues",
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"Description": "Import excel files into R. Supports '.xls' via the embedded 'libxls' C library <https://github.com/libxls/libxls> and '.xlsx' via the embedded 'RapidXML' C++ library <https://rapidxml.sourceforge.net/>. Works on Windows, Mac and Linux without external dependencies.",
"License": "MIT + file LICENSE",
"URL": "https://readxl.tidyverse.org, https://github.com/tidyverse/readxl",
"BugReports": "https://github.com/tidyverse/readxl/issues",
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"VignetteBuilder": "knitr",
"Config/Needs/website": "tidyverse/tidytemplate, tidyverse",
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"Repository": "CRAN"
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"Title": "Match Regular Expressions with a Nicer 'API'",
"Author": "Gabor Csardi",
"Maintainer": "Gabor Csardi <csardi.gabor@gmail.com>",
"Description": "A small wrapper on 'regexpr' to extract the matches and captured groups from the match of a regular expression to a character vector.",
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"Title": "R Package Installation from Remote Repositories, Including 'GitHub'",
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"Description": "Download and install R packages stored in 'GitHub', 'GitLab', 'Bitbucket', 'Bioconductor', or plain 'subversion' or 'git' repositories. This package provides the 'install_*' functions in 'devtools'. Indeed most of the code was copied over from 'devtools'.",
"License": "MIT + file LICENSE",
"URL": "https://remotes.r-lib.org, https://github.com/r-lib/remotes#readme",
"BugReports": "https://github.com/r-lib/remotes/issues",
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],
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"stats",
"tools",
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"covr",
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"knitr",
"mockery",
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"rmarkdown",
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"Description": "A dependency management toolkit for R. Using 'renv', you can create and manage project-local R libraries, save the state of these libraries to a 'lockfile', and later restore your library as required. Together, these tools can help make your projects more isolated, portable, and reproducible.",
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"knitr",
"miniUI",
"modules",
"packrat",
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"Repository": "CRAN"
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"Author": "Hadley Wickham <h.wickham@gmail.com>",
"Maintainer": "Hadley Wickham <h.wickham@gmail.com>",
"Description": "Flexibly restructure and aggregate data using just two functions: melt and 'dcast' (or 'acast').",
"License": "MIT + file LICENSE",
"URL": "https://github.com/hadley/reshape",
"BugReports": "https://github.com/hadley/reshape/issues",
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"Description": "Interface to 'Python' modules, classes, and functions. When calling into 'Python', R data types are automatically converted to their equivalent 'Python' types. When values are returned from 'Python' to R they are converted back to R types. Compatible with all versions of 'Python' >= 2.7.",
"License": "Apache License 2.0",
"URL": "https://rstudio.github.io/reticulate/, https://github.com/rstudio/reticulate",
"BugReports": "https://github.com/rstudio/reticulate/issues",
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"Rcpp (>= 1.0.7)",
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"here",
"jsonlite",
"methods",
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"rappdirs",
"utils",
"rlang",
"withr"
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"knitr",
"glue",
"cli",
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"Config/build/compilation-database": "true",
"NeedsCompilation": "yes",
"Author": "Tomasz Kalinowski [ctb, cre], Kevin Ushey [aut], JJ Allaire [aut], RStudio [cph, fnd], Yuan Tang [aut, cph] (<https://orcid.org/0000-0001-5243-233X>), Dirk Eddelbuettel [ctb, cph], Bryan Lewis [ctb, cph], Sigrid Keydana [ctb], Ryan Hafen [ctb, cph], Marcus Geelnard [ctb, cph] (TinyThread library, http://tinythreadpp.bitsnbites.eu/)",
"Maintainer": "Tomasz Kalinowski <tomasz@posit.co>",
"Repository": "CRAN"
},
"rio": {
"Package": "rio",
"Version": "1.2.3",
"Source": "Repository",
"Type": "Package",
"Title": "A Swiss-Army Knife for Data I/O",
"Authors@R": "c(person(\"Jason\", \"Becker\", role = \"aut\", email = \"jason@jbecker.co\"), person(\"Chung-hong\", \"Chan\", role = c(\"aut\", \"cre\"), email = \"chainsawtiney@gmail.com\", comment = c(ORCID = \"0000-0002-6232-7530\")), person(\"David\", \"Schoch\", email = \"david@schochastics.net\", role = c(\"aut\"), comment = c(ORCID = \"0000-0003-2952-4812\")), person(\"Geoffrey CH\", \"Chan\", role = \"ctb\", email = \"gefchchan@gmail.com\"), person(\"Thomas J.\", \"Leeper\", role = \"aut\", email = \"thosjleeper@gmail.com\", comment = c(ORCID = \"0000-0003-4097-6326\")), person(\"Christopher\", \"Gandrud\", role = \"ctb\"), person(\"Andrew\", \"MacDonald\", role = \"ctb\"), person(\"Ista\", \"Zahn\", role = \"ctb\"), person(\"Stanislaus\", \"Stadlmann\", role = \"ctb\"), person(\"Ruaridh\", \"Williamson\", role = \"ctb\", email = \"ruaridh.williamson@gmail.com\"), person(\"Patrick\", \"Kennedy\", role = \"ctb\"), person(\"Ryan\", \"Price\", email = \"ryapric@gmail.com\", role = \"ctb\"), person(\"Trevor L\", \"Davis\", email = \"trevor.l.davis@gmail.com\", role = \"ctb\"), person(\"Nathan\", \"Day\", email = \"nathancday@gmail.com\", role = \"ctb\"), person(\"Bill\", \"Denney\", email=\"wdenney@humanpredictions.com\", role=\"ctb\", comment=c(ORCID=\"0000-0002-5759-428X\")), person(\"Alex\", \"Bokov\", email = \"alex.bokov@gmail.com\", role = \"ctb\", comment=c(ORCID=\"0000-0002-0511-9815\")), person(\"Hugo\", \"Gruson\", role = \"ctb\", comment = c(ORCID = \"0000-0002-4094-1476\")) )",
"Description": "Streamlined data import and export by making assumptions that the user is probably willing to make: 'import()' and 'export()' determine the data format from the file extension, reasonable defaults are used for data import and export, web-based import is natively supported (including from SSL/HTTPS), compressed files can be read directly, and fast import packages are used where appropriate. An additional convenience function, 'convert()', provides a simple method for converting between file types.",
"URL": "https://gesistsa.github.io/rio/, https://github.com/gesistsa/rio",
"BugReports": "https://github.com/gesistsa/rio/issues",
"Depends": [
"R (>= 4.0)"
],
"Imports": [
"tools",
"stats",
"utils",
"foreign",
"haven (>= 1.1.2)",
"curl (>= 0.6)",
"data.table (>= 1.11.2)",
"readxl (>= 0.1.1)",
"tibble",
"writexl",
"lifecycle",
"R.utils",
"readr"
],
"Suggests": [
"datasets",
"bit64",
"testthat",
"knitr",
"magrittr",
"clipr",
"fst",
"hexView",
"jsonlite",
"pzfx",
"readODS (>= 2.1.0)",
"rmarkdown",
"rmatio",
"xml2 (>= 1.2.0)",
"yaml",
"qs",
"arrow (>= 0.17.0)",
"stringi",
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],
"License": "GPL-2",
"VignetteBuilder": "knitr",
"Encoding": "UTF-8",
"RoxygenNote": "7.3.1",
"Config/Needs/website": "gesistsa/tsatemplate",
"NeedsCompilation": "no",
"Author": "Jason Becker [aut], Chung-hong Chan [aut, cre] (<https://orcid.org/0000-0002-6232-7530>), David Schoch [aut] (<https://orcid.org/0000-0003-2952-4812>), Geoffrey CH Chan [ctb], Thomas J. Leeper [aut] (<https://orcid.org/0000-0003-4097-6326>), Christopher Gandrud [ctb], Andrew MacDonald [ctb], Ista Zahn [ctb], Stanislaus Stadlmann [ctb], Ruaridh Williamson [ctb], Patrick Kennedy [ctb], Ryan Price [ctb], Trevor L Davis [ctb], Nathan Day [ctb], Bill Denney [ctb] (<https://orcid.org/0000-0002-5759-428X>), Alex Bokov [ctb] (<https://orcid.org/0000-0002-0511-9815>), Hugo Gruson [ctb] (<https://orcid.org/0000-0002-4094-1476>)",
"Maintainer": "Chung-hong Chan <chainsawtiney@gmail.com>",
"Repository": "CRAN"
},
"rlang": {
"Package": "rlang",
"Version": "1.1.5",
"Source": "Repository",
"Title": "Functions for Base Types and Core R and 'Tidyverse' Features",
"Description": "A toolbox for working with base types, core R features like the condition system, and core 'Tidyverse' features like tidy evaluation.",
"Authors@R": "c( person(\"Lionel\", \"Henry\", ,\"lionel@posit.co\", c(\"aut\", \"cre\")), person(\"Hadley\", \"Wickham\", ,\"hadley@posit.co\", \"aut\"), person(given = \"mikefc\", email = \"mikefc@coolbutuseless.com\", role = \"cph\", comment = \"Hash implementation based on Mike's xxhashlite\"), person(given = \"Yann\", family = \"Collet\", role = \"cph\", comment = \"Author of the embedded xxHash library\"), person(given = \"Posit, PBC\", role = c(\"cph\", \"fnd\")) )",
"License": "MIT + file LICENSE",
"ByteCompile": "true",
"Biarch": "true",
"Depends": [
"R (>= 3.5.0)"
],
"Imports": [
"utils"
],
"Suggests": [
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"covr",
"crayon",
"fs",
"glue",
"knitr",
"magrittr",
"methods",
"pillar",
"rmarkdown",
"stats",
"testthat (>= 3.0.0)",
"tibble",
"usethis",
"vctrs (>= 0.2.3)",
"withr"
],
"Enhances": [
"winch"
],
"Encoding": "UTF-8",
"RoxygenNote": "7.3.2",
"URL": "https://rlang.r-lib.org, https://github.com/r-lib/rlang",
"BugReports": "https://github.com/r-lib/rlang/issues",
"Config/testthat/edition": "3",
"Config/Needs/website": "dplyr, tidyverse/tidytemplate",
"NeedsCompilation": "yes",
"Author": "Lionel Henry [aut, cre], Hadley Wickham [aut], mikefc [cph] (Hash implementation based on Mike's xxhashlite), Yann Collet [cph] (Author of the embedded xxHash library), Posit, PBC [cph, fnd]",
"Maintainer": "Lionel Henry <lionel@posit.co>",
"Repository": "CRAN"
},
"rmarkdown": {
"Package": "rmarkdown",
"Version": "2.29",
"Source": "Repository",
"Type": "Package",
"Title": "Dynamic Documents for R",
"Authors@R": "c( person(\"JJ\", \"Allaire\", , \"jj@posit.co\", role = \"aut\"), person(\"Yihui\", \"Xie\", , \"xie@yihui.name\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0003-0645-5666\")), person(\"Christophe\", \"Dervieux\", , \"cderv@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0003-4474-2498\")), person(\"Jonathan\", \"McPherson\", , \"jonathan@posit.co\", role = \"aut\"), person(\"Javier\", \"Luraschi\", role = \"aut\"), person(\"Kevin\", \"Ushey\", , \"kevin@posit.co\", role = \"aut\"), person(\"Aron\", \"Atkins\", , \"aron@posit.co\", role = \"aut\"), person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\"), person(\"Joe\", \"Cheng\", , \"joe@posit.co\", role = \"aut\"), person(\"Winston\", \"Chang\", , \"winston@posit.co\", role = \"aut\"), person(\"Richard\", \"Iannone\", , \"rich@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0003-3925-190X\")), person(\"Andrew\", \"Dunning\", role = \"ctb\", comment = c(ORCID = \"0000-0003-0464-5036\")), person(\"Atsushi\", \"Yasumoto\", role = c(\"ctb\", \"cph\"), comment = c(ORCID = \"0000-0002-8335-495X\", cph = \"Number sections Lua filter\")), person(\"Barret\", \"Schloerke\", role = \"ctb\"), person(\"Carson\", \"Sievert\", role = \"ctb\", comment = c(ORCID = \"0000-0002-4958-2844\")), person(\"Devon\", \"Ryan\", , \"dpryan79@gmail.com\", role = \"ctb\", comment = c(ORCID = \"0000-0002-8549-0971\")), person(\"Frederik\", \"Aust\", , \"frederik.aust@uni-koeln.de\", role = \"ctb\", comment = c(ORCID = \"0000-0003-4900-788X\")), person(\"Jeff\", \"Allen\", , \"jeff@posit.co\", role = \"ctb\"), person(\"JooYoung\", \"Seo\", role = \"ctb\", comment = c(ORCID = \"0000-0002-4064-6012\")), person(\"Malcolm\", \"Barrett\", role = \"ctb\"), person(\"Rob\", \"Hyndman\", , \"Rob.Hyndman@monash.edu\", role = \"ctb\"), person(\"Romain\", \"Lesur\", role = \"ctb\"), person(\"Roy\", \"Storey\", role = \"ctb\"), person(\"Ruben\", \"Arslan\", , \"ruben.arslan@uni-goettingen.de\", role = \"ctb\"), person(\"Sergio\", \"Oller\", role = \"ctb\"), person(given = \"Posit Software, PBC\", role = c(\"cph\", \"fnd\")), person(, \"jQuery UI contributors\", role = c(\"ctb\", \"cph\"), comment = \"jQuery UI library; authors listed in inst/rmd/h/jqueryui/AUTHORS.txt\"), person(\"Mark\", \"Otto\", role = \"ctb\", comment = \"Bootstrap library\"), person(\"Jacob\", \"Thornton\", role = \"ctb\", comment = \"Bootstrap library\"), person(, \"Bootstrap contributors\", role = \"ctb\", comment = \"Bootstrap library\"), person(, \"Twitter, Inc\", role = \"cph\", comment = \"Bootstrap library\"), person(\"Alexander\", \"Farkas\", role = c(\"ctb\", \"cph\"), comment = \"html5shiv library\"), person(\"Scott\", \"Jehl\", role = c(\"ctb\", \"cph\"), comment = \"Respond.js library\"), person(\"Ivan\", \"Sagalaev\", role = c(\"ctb\", \"cph\"), comment = \"highlight.js library\"), person(\"Greg\", \"Franko\", role = c(\"ctb\", \"cph\"), comment = \"tocify library\"), person(\"John\", \"MacFarlane\", role = c(\"ctb\", \"cph\"), comment = \"Pandoc templates\"), person(, \"Google, Inc.\", role = c(\"ctb\", \"cph\"), comment = \"ioslides library\"), person(\"Dave\", \"Raggett\", role = \"ctb\", comment = \"slidy library\"), person(, \"W3C\", role = \"cph\", comment = \"slidy library\"), person(\"Dave\", \"Gandy\", role = c(\"ctb\", \"cph\"), comment = \"Font-Awesome\"), person(\"Ben\", \"Sperry\", role = \"ctb\", comment = \"Ionicons\"), person(, \"Drifty\", role = \"cph\", comment = \"Ionicons\"), person(\"Aidan\", \"Lister\", role = c(\"ctb\", \"cph\"), comment = \"jQuery StickyTabs\"), person(\"Benct Philip\", \"Jonsson\", role = c(\"ctb\", \"cph\"), comment = \"pagebreak Lua filter\"), person(\"Albert\", \"Krewinkel\", role = c(\"ctb\", \"cph\"), comment = \"pagebreak Lua filter\") )",
"Description": "Convert R Markdown documents into a variety of formats.",
"License": "GPL-3",
"URL": "https://github.com/rstudio/rmarkdown, https://pkgs.rstudio.com/rmarkdown/",
"BugReports": "https://github.com/rstudio/rmarkdown/issues",
"Depends": [
"R (>= 3.0)"
],
"Imports": [
"bslib (>= 0.2.5.1)",
"evaluate (>= 0.13)",
"fontawesome (>= 0.5.0)",
"htmltools (>= 0.5.1)",
"jquerylib",
"jsonlite",
"knitr (>= 1.43)",
"methods",
"tinytex (>= 0.31)",
"tools",
"utils",
"xfun (>= 0.36)",
"yaml (>= 2.1.19)"
],
"Suggests": [
"digest",
"dygraphs",
"fs",
"rsconnect",
"downlit (>= 0.4.0)",
"katex (>= 1.4.0)",
"sass (>= 0.4.0)",
"shiny (>= 1.6.0)",
"testthat (>= 3.0.3)",
"tibble",
"vctrs",
"cleanrmd",
"withr (>= 2.4.2)",
"xml2"
],
"VignetteBuilder": "knitr",
"Config/Needs/website": "rstudio/quillt, pkgdown",
"Config/testthat/edition": "3",
"Encoding": "UTF-8",
"RoxygenNote": "7.3.2",
"SystemRequirements": "pandoc (>= 1.14) - http://pandoc.org",
"NeedsCompilation": "no",
"Author": "JJ Allaire [aut], Yihui Xie [aut, cre] (<https://orcid.org/0000-0003-0645-5666>), Christophe Dervieux [aut] (<https://orcid.org/0000-0003-4474-2498>), Jonathan McPherson [aut], Javier Luraschi [aut], Kevin Ushey [aut], Aron Atkins [aut], Hadley Wickham [aut], Joe Cheng [aut], Winston Chang [aut], Richard Iannone [aut] (<https://orcid.org/0000-0003-3925-190X>), Andrew Dunning [ctb] (<https://orcid.org/0000-0003-0464-5036>), Atsushi Yasumoto [ctb, cph] (<https://orcid.org/0000-0002-8335-495X>, Number sections Lua filter), Barret Schloerke [ctb], Carson Sievert [ctb] (<https://orcid.org/0000-0002-4958-2844>), Devon Ryan [ctb] (<https://orcid.org/0000-0002-8549-0971>), Frederik Aust [ctb] (<https://orcid.org/0000-0003-4900-788X>), Jeff Allen [ctb], JooYoung Seo [ctb] (<https://orcid.org/0000-0002-4064-6012>), Malcolm Barrett [ctb], Rob Hyndman [ctb], Romain Lesur [ctb], Roy Storey [ctb], Ruben Arslan [ctb], Sergio Oller [ctb], Posit Software, PBC [cph, fnd], jQuery UI contributors [ctb, cph] (jQuery UI library; authors listed in inst/rmd/h/jqueryui/AUTHORS.txt), Mark Otto [ctb] (Bootstrap library), Jacob Thornton [ctb] (Bootstrap library), Bootstrap contributors [ctb] (Bootstrap library), Twitter, Inc [cph] (Bootstrap library), Alexander Farkas [ctb, cph] (html5shiv library), Scott Jehl [ctb, cph] (Respond.js library), Ivan Sagalaev [ctb, cph] (highlight.js library), Greg Franko [ctb, cph] (tocify library), John MacFarlane [ctb, cph] (Pandoc templates), Google, Inc. [ctb, cph] (ioslides library), Dave Raggett [ctb] (slidy library), W3C [cph] (slidy library), Dave Gandy [ctb, cph] (Font-Awesome), Ben Sperry [ctb] (Ionicons), Drifty [cph] (Ionicons), Aidan Lister [ctb, cph] (jQuery StickyTabs), Benct Philip Jonsson [ctb, cph] (pagebreak Lua filter), Albert Krewinkel [ctb, cph] (pagebreak Lua filter)",
"Maintainer": "Yihui Xie <xie@yihui.name>",
"Repository": "CRAN"
},
"roxygen2": {
"Package": "roxygen2",
"Version": "7.3.2",
"Source": "Repository",
"Title": "In-Line Documentation for R",
"Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\", \"cph\"), comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Peter\", \"Danenberg\", , \"pcd@roxygen.org\", role = c(\"aut\", \"cph\")), person(\"Gábor\", \"Csárdi\", , \"csardi.gabor@gmail.com\", role = \"aut\"), person(\"Manuel\", \"Eugster\", role = c(\"aut\", \"cph\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "Generate your Rd documentation, 'NAMESPACE' file, and collation field using specially formatted comments. Writing documentation in-line with code makes it easier to keep your documentation up-to-date as your requirements change. 'roxygen2' is inspired by the 'Doxygen' system for C++.",
"License": "MIT + file LICENSE",
"URL": "https://roxygen2.r-lib.org/, https://github.com/r-lib/roxygen2",
"BugReports": "https://github.com/r-lib/roxygen2/issues",
"Depends": [
"R (>= 3.6)"
],
"Imports": [
"brew",
"cli (>= 3.3.0)",
"commonmark",
"desc (>= 1.2.0)",
"knitr",
"methods",
"pkgload (>= 1.0.2)",
"purrr (>= 1.0.0)",
"R6 (>= 2.1.2)",
"rlang (>= 1.0.6)",
"stringi",
"stringr (>= 1.0.0)",
"utils",
"withr",
"xml2"
],
"Suggests": [
"covr",
"R.methodsS3",
"R.oo",
"rmarkdown (>= 2.16)",
"testthat (>= 3.1.2)",
"yaml"
],
"LinkingTo": [
"cpp11"
],
"VignetteBuilder": "knitr",
"Config/Needs/development": "testthat",
"Config/Needs/website": "tidyverse/tidytemplate",
"Config/testthat/edition": "3",
"Config/testthat/parallel": "TRUE",
"Encoding": "UTF-8",
"Language": "en-GB",
"RoxygenNote": "7.3.1.9000",
"NeedsCompilation": "yes",
"Author": "Hadley Wickham [aut, cre, cph] (<https://orcid.org/0000-0003-4757-117X>), Peter Danenberg [aut, cph], Gábor Csárdi [aut], Manuel Eugster [aut, cph], Posit Software, PBC [cph, fnd]",
"Maintainer": "Hadley Wickham <hadley@posit.co>",
"Repository": "CRAN"
},
"rprojroot": {
"Package": "rprojroot",
"Version": "2.0.4",
"Source": "Repository",
"Title": "Finding Files in Project Subdirectories",
"Authors@R": "person(given = \"Kirill\", family = \"M\\u00fcller\", role = c(\"aut\", \"cre\"), email = \"kirill@cynkra.com\", comment = c(ORCID = \"0000-0002-1416-3412\"))",
"Description": "Robust, reliable and flexible paths to files below a project root. The 'root' of a project is defined as a directory that matches a certain criterion, e.g., it contains a certain regular file.",
"License": "MIT + file LICENSE",
"URL": "https://rprojroot.r-lib.org/, https://github.com/r-lib/rprojroot",
"BugReports": "https://github.com/r-lib/rprojroot/issues",
"Depends": [
"R (>= 3.0.0)"
],
"Suggests": [
"covr",
"knitr",
"lifecycle",
"mockr",
"rlang",
"rmarkdown",
"testthat (>= 3.0.0)",
"withr"
],
"VignetteBuilder": "knitr",
"Config/testthat/edition": "3",
"Encoding": "UTF-8",
"RoxygenNote": "7.2.3",
"NeedsCompilation": "no",
"Author": "Kirill Müller [aut, cre] (<https://orcid.org/0000-0002-1416-3412>)",
"Maintainer": "Kirill Müller <kirill@cynkra.com>",
"Repository": "CRAN"
},
"rstudioapi": {
"Package": "rstudioapi",
"Version": "0.17.1",
"Source": "Repository",
"Title": "Safely Access the RStudio API",
"Description": "Access the RStudio API (if available) and provide informative error messages when it's not.",
"Authors@R": "c( person(\"Kevin\", \"Ushey\", role = c(\"aut\", \"cre\"), email = \"kevin@rstudio.com\"), person(\"JJ\", \"Allaire\", role = c(\"aut\"), email = \"jj@posit.co\"), person(\"Hadley\", \"Wickham\", role = c(\"aut\"), email = \"hadley@posit.co\"), person(\"Gary\", \"Ritchie\", role = c(\"aut\"), email = \"gary@posit.co\"), person(family = \"RStudio\", role = \"cph\") )",
"Maintainer": "Kevin Ushey <kevin@rstudio.com>",
"License": "MIT + file LICENSE",
"URL": "https://rstudio.github.io/rstudioapi/, https://github.com/rstudio/rstudioapi",
"BugReports": "https://github.com/rstudio/rstudioapi/issues",
"RoxygenNote": "7.3.2",
"Suggests": [
"testthat",
"knitr",
"rmarkdown",
"clipr",
"covr"
],
"VignetteBuilder": "knitr",
"Encoding": "UTF-8",
"NeedsCompilation": "no",
"Author": "Kevin Ushey [aut, cre], JJ Allaire [aut], Hadley Wickham [aut], Gary Ritchie [aut], RStudio [cph]",
"Repository": "CRAN"
},
"rversions": {
"Package": "rversions",
"Version": "2.1.2",
"Source": "Repository",
"Title": "Query 'R' Versions, Including 'r-release' and 'r-oldrel'",
"Authors@R": "c(person(given = \"Gábor\", family = \"Csárdi\", role = c(\"aut\", \"cre\"), email = \"csardi.gabor@gmail.com\"), person(given = \"Jeroen\", family = \"Ooms\", role = \"ctb\", email = \"jeroen.ooms@stat.ucla.edu\"), person(given = \"R Consortium\", role = \"fnd\"))",
"Description": "Query the main 'R' 'SVN' repository to find the versions 'r-release' and 'r-oldrel' refer to, and also all previous 'R' versions and their release dates.",
"License": "MIT + file LICENSE",
"URL": "https://github.com/r-hub/rversions, https://r-hub.github.io/rversions/",
"BugReports": "https://github.com/r-hub/rversions/issues",
"Imports": [
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"utils",
"xml2 (>= 1.0.0)"
],
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"mockery",
"testthat"
],
"Encoding": "UTF-8",
"RoxygenNote": "7.2.1.9000",
"NeedsCompilation": "no",
"Author": "Gábor Csárdi [aut, cre], Jeroen Ooms [ctb], R Consortium [fnd]",
"Maintainer": "Gábor Csárdi <csardi.gabor@gmail.com>",
"Repository": "CRAN"
},
"sass": {
"Package": "sass",
"Version": "0.4.9",
"Source": "Repository",
"Type": "Package",
"Title": "Syntactically Awesome Style Sheets ('Sass')",
"Description": "An 'SCSS' compiler, powered by the 'LibSass' library. With this, R developers can use variables, inheritance, and functions to generate dynamic style sheets. The package uses the 'Sass CSS' extension language, which is stable, powerful, and CSS compatible.",
"Authors@R": "c( person(\"Joe\", \"Cheng\", , \"joe@rstudio.com\", \"aut\"), person(\"Timothy\", \"Mastny\", , \"tim.mastny@gmail.com\", \"aut\"), person(\"Richard\", \"Iannone\", , \"rich@rstudio.com\", \"aut\", comment = c(ORCID = \"0000-0003-3925-190X\")), person(\"Barret\", \"Schloerke\", , \"barret@rstudio.com\", \"aut\", comment = c(ORCID = \"0000-0001-9986-114X\")), person(\"Carson\", \"Sievert\", , \"carson@rstudio.com\", c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-4958-2844\")), person(\"Christophe\", \"Dervieux\", , \"cderv@rstudio.com\", c(\"ctb\"), comment = c(ORCID = \"0000-0003-4474-2498\")), person(family = \"RStudio\", role = c(\"cph\", \"fnd\")), person(family = \"Sass Open Source Foundation\", role = c(\"ctb\", \"cph\"), comment = \"LibSass library\"), person(\"Greter\", \"Marcel\", role = c(\"ctb\", \"cph\"), comment = \"LibSass library\"), person(\"Mifsud\", \"Michael\", role = c(\"ctb\", \"cph\"), comment = \"LibSass library\"), person(\"Hampton\", \"Catlin\", role = c(\"ctb\", \"cph\"), comment = \"LibSass library\"), person(\"Natalie\", \"Weizenbaum\", role = c(\"ctb\", \"cph\"), comment = \"LibSass library\"), person(\"Chris\", \"Eppstein\", role = c(\"ctb\", \"cph\"), comment = \"LibSass library\"), person(\"Adams\", \"Joseph\", role = c(\"ctb\", \"cph\"), comment = \"json.cpp\"), person(\"Trifunovic\", \"Nemanja\", role = c(\"ctb\", \"cph\"), comment = \"utf8.h\") )",
"License": "MIT + file LICENSE",
"URL": "https://rstudio.github.io/sass/, https://github.com/rstudio/sass",
"BugReports": "https://github.com/rstudio/sass/issues",
"Encoding": "UTF-8",
"RoxygenNote": "7.3.1",
"SystemRequirements": "GNU make",
"Imports": [
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"rlang (>= 0.4.10)",
"htmltools (>= 0.5.1)",
"R6",
"rappdirs"
],
"Suggests": [
"testthat",
"knitr",
"rmarkdown",
"withr",
"shiny",
"curl"
],
"VignetteBuilder": "knitr",
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"Title": "SPArse Matrix",
"Date": "2025-01-20",
"Authors@R": "c(person(\"Reinhard\", \"Furrer\", role = c(\"aut\", \"cre\"), email = \"reinhard.furrer@math.uzh.ch\", comment = c(ORCID = \"0000-0002-6319-2332\")), person(\"Florian\", \"Gerber\", role = c(\"aut\"), email = \"florian.gerber@math.uzh.ch\", comment = c(ORCID = \"0000-0001-8545-5263\")), person(\"Roman\", \"Flury\", role = c(\"aut\"), email = \"roman.flury@math.uzh.ch\", comment = c(ORCID = \"0000-0002-0349-8698\")), person(\"Daniel\", \"Gerber\", role = \"ctb\", email = \"daniel_gerber_2222@hotmail.com\"), person(\"Kaspar\", \"Moesinger\", role = \"ctb\", email = \"kaspar.moesinger@gmail.com\"), person(\"Annina\", \"Cincera\", email = \"annina.cincera@math.uzh.ch\", role = \"ctb\"), person(\"Youcef\", \"Saad\", role = \"ctb\", comment = \"SPARSEKIT http://www-users.cs.umn.edu/~saad/software/SPARSKIT/\"), person(c(\"Esmond\", \"G.\"), \"Ng\", role = \"ctb\", comment = \"Fortran Cholesky routines\"), person(c(\"Barry\", \"W.\"), \"Peyton\", role = \"ctb\", comment = \"Fortran Cholesky routines\"), person(c(\"Joseph\", \"W.H.\"), \"Liu\", role = \"ctb\", comment = \"Fortran Cholesky routines\"), person(c(\"Alan\", \"D.\"), \"George\", role = \"ctb\", comment = \"Fortran Cholesky routines\"), person(c(\"Lehoucq\", \"B.\"), \"Rich\", role = \"ctb\", comment = \"ARPACK\"), person(c(\"Maschhoff\"), \"Kristi\", role = \"ctb\", comment = \"ARPACK\"), person(c(\"Sorensen\", \"C.\"), \"Danny\", role = \"ctb\", comment = \"ARPACK\"), person(c(\"Yang\"), \"Chao\", role = \"ctb\", comment = \"ARPACK\"))",
"Depends": [
"R (>= 4.0)"
],
"Imports": [
"dotCall64",
"grid",
"methods",
"Rcpp (>= 1.0.8.3)"
],
"LinkingTo": [
"Rcpp"
],
"Suggests": [
"spam64",
"fields",
"Matrix",
"testthat",
"R.rsp",
"truncdist",
"knitr",
"rmarkdown"
],
"VignetteBuilder": "R.rsp, knitr",
"Description": "Set of functions for sparse matrix algebra. Differences with other sparse matrix packages are: (1) we only support (essentially) one sparse matrix format, (2) based on transparent and simple structure(s), (3) tailored for MCMC calculations within G(M)RF. (4) and it is fast and scalable (with the extension package spam64). Documentation about 'spam' is provided by vignettes included in this package, see also Furrer and Sain (2010) <doi:10.18637/jss.v036.i10>; see 'citation(\"spam\")' for details.",
"LazyData": "true",
"License": "LGPL-2 | BSD_3_clause + file LICENSE",
"URL": "https://www.math.uzh.ch/pages/spam/",
"BugReports": "https://git.math.uzh.ch/reinhard.furrer/spam/-/issues",
"NeedsCompilation": "yes",
"Author": "Reinhard Furrer [aut, cre] (<https://orcid.org/0000-0002-6319-2332>), Florian Gerber [aut] (<https://orcid.org/0000-0001-8545-5263>), Roman Flury [aut] (<https://orcid.org/0000-0002-0349-8698>), Daniel Gerber [ctb], Kaspar Moesinger [ctb], Annina Cincera [ctb], Youcef Saad [ctb] (SPARSEKIT http://www-users.cs.umn.edu/~saad/software/SPARSKIT/), Esmond G. Ng [ctb] (Fortran Cholesky routines), Barry W. Peyton [ctb] (Fortran Cholesky routines), Joseph W.H. Liu [ctb] (Fortran Cholesky routines), Alan D. George [ctb] (Fortran Cholesky routines), Lehoucq B. Rich [ctb] (ARPACK), Maschhoff Kristi [ctb] (ARPACK), Sorensen C. Danny [ctb] (ARPACK), Yang Chao [ctb] (ARPACK)",
"Maintainer": "Reinhard Furrer <reinhard.furrer@math.uzh.ch>",
"Repository": "CRAN",
"Encoding": "UTF-8"
},
"spatstat.data": {
"Package": "spatstat.data",
"Version": "3.1-4",
"Source": "Repository",
"Date": "2024-11-15",
"Title": "Datasets for 'spatstat' Family",
"Authors@R": "c(person(\"Adrian\", \"Baddeley\", role = c(\"aut\", \"cre\"), email = \"Adrian.Baddeley@curtin.edu.au\", comment = c(ORCID=\"0000-0001-9499-8382\")), person(\"Rolf\", \"Turner\", role = \"aut\", email=\"rolfturner@posteo.net\", comment=c(ORCID=\"0000-0001-5521-5218\")), person(\"Ege\", \"Rubak\", role = \"aut\", email = \"rubak@math.aau.dk\", comment=c(ORCID=\"0000-0002-6675-533X\")), person(\"W\", \"Aherne\", role=\"ctb\"), person(\"Freda\", \"Alexander\", role=\"ctb\"), person(\"Qi Wei\", \"Ang\", role=\"ctb\"), person(\"Sourav\", \"Banerjee\", role=\"ctb\"), person(\"Mark\", \"Berman\", role=\"ctb\"), person(\"R\", \"Bernhardt\", role=\"ctb\"), person(\"Thomas\", \"Berndtsen\", role=\"ctb\"), person(\"Andrew\", \"Bevan\", role=\"ctb\"), person(\"Jeffrey\", \"Betts\", role=\"ctb\"), person(\"Ray\", \"Cartwright\", role=\"ctb\"), person(\"Lucia\", \"Cobo Sanchez\", role=\"ctb\"), person(\"Richard\", \"Condit\", role=\"ctb\"), person(\"Francis\", \"Crick\", role=\"ctb\"), person(\"Marcelino\", \"de la Cruz Rot\", role=\"ctb\"), person(\"Jack\", \"Cuzick\", role=\"ctb\"), person(\"Tilman\", \"Davies\", role=\"ctb\"), person(\"Peter\", \"Diggle\", role=\"ctb\"), person(\"Michael\", \"Drinkwater\", role=\"ctb\"), person(\"Stephen\", \"Eglen\", role=\"ctb\"), person(\"Robert\", \"Edwards\", role=\"ctb\"), person(\"AE\", \"Esler\", role=\"ctb\"), person(\"Gregory\", \"Evans\", role=\"ctb\"), person(\"Bernard\", \"Fingleton\", role=\"ctb\"), person(\"Olivier\", \"Flores\", role=\"ctb\"), person(\"David\", \"Ford\", role=\"ctb\"), person(\"Robin\", \"Foster\", role=\"ctb\"), person(\"Janet\", \"Franklin\", role=\"ctb\"), person(\"Neba\", \"Funwi-Gabga\", role=\"ctb\"), person(\"DJ\", \"Gerrard\", role=\"ctb\"), person(\"Andy\", \"Green\", role=\"ctb\"), person(\"Tim\", \"Griffin\", role=\"ctb\"), person(\"Ute\", \"Hahn\", role=\"ctb\"), person(\"RD\", \"Harkness\", role=\"ctb\"), person(\"Arthur\", \"Hickman\", role=\"ctb\"), person(\"Stephen\", \"Hubbell\", role=\"ctb\"), person(\"Austin\", \"Hughes\", role=\"ctb\"), person(\"Jonathan\", \"Huntington\", role=\"ctb\"), person(\"MJ\", \"Hutchings\", role=\"ctb\"), person(\"Jackie\", \"Inwald\", role=\"ctb\"), person(\"Valerie\", \"Isham\", role=\"ctb\"), person(\"Aruna\", \"Jammalamadaka\", role=\"ctb\"), person(\"Carl\", \"Knox-Robinson\", role=\"ctb\"), person(\"Mahdieh\", \"Khanmohammadi\", role=\"ctb\"), person(\"Tero\", \"Kokkila\", role=\"ctb\"), person(\"Bas\", \"Kooijman\", role=\"ctb\"), person(\"Kenneth\", \"Kosik\", role=\"ctb\"), person(\"Peter\", \"Kovesi\", role=\"ctb\"), person(\"Lily\", \"Kozmian-Ledward\", role=\"ctb\"), person(\"Robert\", \"Lamb\", role=\"ctb\"), person(\"NA\", \"Laskurain\", role=\"ctb\"), person(\"George\", \"Leser\", role=\"ctb\"), person(\"Marie-Colette\", \"van Lieshout\", role=\"ctb\"), person(\"AF\", \"Mark\", role=\"ctb\"), person(\"Jorge\", \"Mateu\", role=\"ctb\"), person(\"Annikki\", \"Makela\", role=\"ctb\"), person(\"Enrique\", \"Miranda\", role=\"ctb\"), person(\"Nicoletta\", \"Nava\", role=\"ctb\"), person(\"M\", \"Numata\", role=\"ctb\"), person(\"Matti\", \"Nummelin\", role=\"ctb\"), person(\"Jens Randel\", \"Nyengaard\", role=\"ctb\"), person(\"Yosihiko\", \"Ogata\", role=\"ctb\"), person(\"Si\", \"Palmer\", role=\"ctb\"), person(\"Antti\", \"Penttinen\", role=\"ctb\"), person(\"Sandra\", \"Pereira\", role=\"ctb\"), person(\"Nicolas\", \"Picard\", role=\"ctb\"), person(\"William\", \"Platt\", role=\"ctb\"), person(\"Stephen\", \"Rathbun\", role=\"ctb\"), person(\"Brian\", \"Ripley\", role=\"ctb\"), person(\"Roger\", \"Sainsbury\", role=\"ctb\"), person(\"Dietrich\", \"Stoyan\", role=\"ctb\"), person(\"David\", \"Strauss\", role=\"ctb\"), person(\"L\", \"Strand\", role=\"ctb\"), person(\"Masaharu\", \"Tanemura\", role=\"ctb\"), person(\"Graham\", \"Upton\", role=\"ctb\"), person(\"Bill\", \"Venables\", role=\"ctb\"), person(\"Sasha\", \"Voss\", role=\"ctb\"), person(\"Rasmus\", \"Waagepetersen\", role=\"ctb\"), person(\"Keith\", \"Watkins\", role=\"ctb\"), person(\"H\", \"Wendrock\", role=\"ctb\") )",
"Maintainer": "Adrian Baddeley <Adrian.Baddeley@curtin.edu.au>",
"Depends": [
"R (>= 3.5.0)"
],
"Imports": [
"spatstat.utils (>= 3.0-5)",
"Matrix"
],
"Suggests": [
"spatstat.geom",
"spatstat.random",
"spatstat.explore",
"spatstat.model",
"spatstat.linnet"
],
"Description": "Contains all the datasets for the 'spatstat' family of packages.",
"License": "GPL (>= 2)",
"URL": "http://spatstat.org/",
"LazyData": "true",
"NeedsCompilation": "no",
"ByteCompile": "true",
"BugReports": "https://github.com/spatstat/spatstat.data/issues",
"Author": "Adrian Baddeley [aut, cre] (<https://orcid.org/0000-0001-9499-8382>), Rolf Turner [aut] (<https://orcid.org/0000-0001-5521-5218>), Ege Rubak [aut] (<https://orcid.org/0000-0002-6675-533X>), W Aherne [ctb], Freda Alexander [ctb], Qi Wei Ang [ctb], Sourav Banerjee [ctb], Mark Berman [ctb], R Bernhardt [ctb], Thomas Berndtsen [ctb], Andrew Bevan [ctb], Jeffrey Betts [ctb], Ray Cartwright [ctb], Lucia Cobo Sanchez [ctb], Richard Condit [ctb], Francis Crick [ctb], Marcelino de la Cruz Rot [ctb], Jack Cuzick [ctb], Tilman Davies [ctb], Peter Diggle [ctb], Michael Drinkwater [ctb], Stephen Eglen [ctb], Robert Edwards [ctb], AE Esler [ctb], Gregory Evans [ctb], Bernard Fingleton [ctb], Olivier Flores [ctb], David Ford [ctb], Robin Foster [ctb], Janet Franklin [ctb], Neba Funwi-Gabga [ctb], DJ Gerrard [ctb], Andy Green [ctb], Tim Griffin [ctb], Ute Hahn [ctb], RD Harkness [ctb], Arthur Hickman [ctb], Stephen Hubbell [ctb], Austin Hughes [ctb], Jonathan Huntington [ctb], MJ Hutchings [ctb], Jackie Inwald [ctb], Valerie Isham [ctb], Aruna Jammalamadaka [ctb], Carl Knox-Robinson [ctb], Mahdieh Khanmohammadi [ctb], Tero Kokkila [ctb], Bas Kooijman [ctb], Kenneth Kosik [ctb], Peter Kovesi [ctb], Lily Kozmian-Ledward [ctb], Robert Lamb [ctb], NA Laskurain [ctb], George Leser [ctb], Marie-Colette van Lieshout [ctb], AF Mark [ctb], Jorge Mateu [ctb], Annikki Makela [ctb], Enrique Miranda [ctb], Nicoletta Nava [ctb], M Numata [ctb], Matti Nummelin [ctb], Jens Randel Nyengaard [ctb], Yosihiko Ogata [ctb], Si Palmer [ctb], Antti Penttinen [ctb], Sandra Pereira [ctb], Nicolas Picard [ctb], William Platt [ctb], Stephen Rathbun [ctb], Brian Ripley [ctb], Roger Sainsbury [ctb], Dietrich Stoyan [ctb], David Strauss [ctb], L Strand [ctb], Masaharu Tanemura [ctb], Graham Upton [ctb], Bill Venables [ctb], Sasha Voss [ctb], Rasmus Waagepetersen [ctb], Keith Watkins [ctb], H Wendrock [ctb]",
"Repository": "CRAN",
"Encoding": "UTF-8"
},
"spatstat.explore": {
"Package": "spatstat.explore",
"Version": "3.3-4",
"Source": "Repository",
"Date": "2025-01-08",
"Title": "Exploratory Data Analysis for the 'spatstat' Family",
"Authors@R": "c(person(\"Adrian\", \"Baddeley\", role = c(\"aut\", \"cre\", \"cph\"), email = \"Adrian.Baddeley@curtin.edu.au\", comment = c(ORCID=\"0000-0001-9499-8382\")), person(\"Rolf\", \"Turner\", role = c(\"aut\", \"cph\"), email=\"rolfturner@posteo.net\", comment=c(ORCID=\"0000-0001-5521-5218\")), person(\"Ege\", \"Rubak\", role = c(\"aut\", \"cph\"), email = \"rubak@math.aau.dk\", comment=c(ORCID=\"0000-0002-6675-533X\")), person(\"Kasper\", \"Klitgaard Berthelsen\", role = \"ctb\"), person(\"Warick\", \"Brown\", role = \"cph\"), person(\"Achmad\", \"Choiruddin\", role = \"ctb\"), person(\"Jean-Francois\", \"Coeurjolly\", role = \"ctb\"), person(\"Ottmar\", \"Cronie\", role = \"ctb\"), person(\"Tilman\", \"Davies\", role = c(\"ctb\", \"cph\")), person(\"Julian\", \"Gilbey\", role = \"ctb\"), person(\"Jonatan\", \"Gonzalez\", role = \"ctb\"), person(\"Yongtao\", \"Guan\", role = \"ctb\"), person(\"Ute\", \"Hahn\", role = \"ctb\"), person(\"Kassel\", \"Hingee\", role = c(\"ctb\", \"cph\")), person(\"Abdollah\", \"Jalilian\", role = \"ctb\"), person(\"Frederic\", \"Lavancier\", role = \"ctb\"), person(\"Marie-Colette\", \"van Lieshout\", role = c(\"ctb\", \"cph\")), person(\"Greg\", \"McSwiggan\", role = \"ctb\"), person(\"Robin K\", \"Milne\", role = \"cph\"), person(\"Tuomas\", \"Rajala\", role = \"ctb\"), person(\"Suman\", \"Rakshit\", role = c(\"ctb\", \"cph\")), person(\"Dominic\", \"Schuhmacher\", role = \"ctb\"), person(\"Rasmus\", \"Plenge Waagepetersen\", role = \"ctb\"), person(\"Hangsheng\", \"Wang\", role = \"ctb\"))",
"Maintainer": "Adrian Baddeley <Adrian.Baddeley@curtin.edu.au>",
"Depends": [
"R (>= 3.5.0)",
"spatstat.data (>= 3.1-2)",
"spatstat.univar (>= 3.0-0)",
"spatstat.geom (>= 3.3-2)",
"spatstat.random (>= 3.3-1)",
"stats",
"graphics",
"grDevices",
"utils",
"methods",
"nlme"
],
"Imports": [
"spatstat.utils (>= 3.1-0)",
"spatstat.sparse (>= 3.1-0)",
"goftest (>= 1.2-2)",
"Matrix",
"abind"
],
"Suggests": [
"sm",
"gsl",
"locfit",
"spatial",
"fftwtools (>= 0.9-8)",
"spatstat.linnet (>= 3.2-1)",
"spatstat.model (>= 3.3-1)",
"spatstat (>= 3.1-1)"
],
"Description": "Functionality for exploratory data analysis and nonparametric analysis of spatial data, mainly spatial point patterns, in the 'spatstat' family of packages. (Excludes analysis of spatial data on a linear network, which is covered by the separate package 'spatstat.linnet'.) Methods include quadrat counts, K-functions and their simulation envelopes, nearest neighbour distance and empty space statistics, Fry plots, pair correlation function, kernel smoothed intensity, relative risk estimation with cross-validated bandwidth selection, mark correlation functions, segregation indices, mark dependence diagnostics, and kernel estimates of covariate effects. Formal hypothesis tests of random pattern (chi-squared, Kolmogorov-Smirnov, Monte Carlo, Diggle-Cressie-Loosmore-Ford, Dao-Genton, two-stage Monte Carlo) and tests for covariate effects (Cox-Berman-Waller-Lawson, Kolmogorov-Smirnov, ANOVA) are also supported.",
"License": "GPL (>= 2)",
"URL": "http://spatstat.org/",
"NeedsCompilation": "yes",
"ByteCompile": "true",
"BugReports": "https://github.com/spatstat/spatstat.explore/issues",
"Author": "Adrian Baddeley [aut, cre, cph] (<https://orcid.org/0000-0001-9499-8382>), Rolf Turner [aut, cph] (<https://orcid.org/0000-0001-5521-5218>), Ege Rubak [aut, cph] (<https://orcid.org/0000-0002-6675-533X>), Kasper Klitgaard Berthelsen [ctb], Warick Brown [cph], Achmad Choiruddin [ctb], Jean-Francois Coeurjolly [ctb], Ottmar Cronie [ctb], Tilman Davies [ctb, cph], Julian Gilbey [ctb], Jonatan Gonzalez [ctb], Yongtao Guan [ctb], Ute Hahn [ctb], Kassel Hingee [ctb, cph], Abdollah Jalilian [ctb], Frederic Lavancier [ctb], Marie-Colette van Lieshout [ctb, cph], Greg McSwiggan [ctb], Robin K Milne [cph], Tuomas Rajala [ctb], Suman Rakshit [ctb, cph], Dominic Schuhmacher [ctb], Rasmus Plenge Waagepetersen [ctb], Hangsheng Wang [ctb]",
"Repository": "CRAN",
"Encoding": "UTF-8"
},
"spatstat.geom": {
"Package": "spatstat.geom",
"Version": "3.3-5",
"Source": "Repository",
"Date": "2025-01-18",
"Title": "Geometrical Functionality of the 'spatstat' Family",
"Authors@R": "c(person(\"Adrian\", \"Baddeley\", role = c(\"aut\", \"cre\", \"cph\"), email = \"Adrian.Baddeley@curtin.edu.au\", comment = c(ORCID=\"0000-0001-9499-8382\")), person(\"Rolf\", \"Turner\", role = c(\"aut\", \"cph\"), email=\"rolfturner@posteo.net\", comment=c(ORCID=\"0000-0001-5521-5218\")), person(\"Ege\", \"Rubak\", role = c(\"aut\", \"cph\"), email = \"rubak@math.aau.dk\", comment=c(ORCID=\"0000-0002-6675-533X\")), person(\"Tilman\", \"Davies\", role = \"ctb\"), person(\"Ute\", \"Hahn\", role = \"ctb\"), person(\"Abdollah\", \"Jalilian\", role = \"ctb\"), person(\"Greg\", \"McSwiggan\", role = c(\"ctb\", \"cph\")), person(\"Sebastian\", \"Meyer\", role = c(\"ctb\", \"cph\")), person(\"Jens\", \"Oehlschlaegel\", role = c(\"ctb\", \"cph\")), person(\"Suman\", \"Rakshit\", role = \"ctb\"), person(\"Dominic\", \"Schuhmacher\", role = \"ctb\"), person(\"Rasmus\", \"Waagepetersen\", role = \"ctb\"))",
"Maintainer": "Adrian Baddeley <Adrian.Baddeley@curtin.edu.au>",
"Depends": [
"R (>= 3.5.0)",
"spatstat.data (>= 3.1)",
"spatstat.univar (>= 3.1-0)",
"stats",
"graphics",
"grDevices",
"utils",
"methods"
],
"Imports": [
"spatstat.utils (>= 3.1-2)",
"deldir (>= 1.0-2)",
"polyclip (>= 1.10-0)"
],
"Suggests": [
"spatstat.random (>= 3.3)",
"spatstat.explore (>= 3.3)",
"spatstat.model (>= 3.3)",
"spatstat.linnet (>= 3.2)",
"spatial",
"fftwtools (>= 0.9-8)",
"spatstat (>= 3.2)"
],
"Description": "Defines spatial data types and supports geometrical operations on them. Data types include point patterns, windows (domains), pixel images, line segment patterns, tessellations and hyperframes. Capabilities include creation and manipulation of data (using command line or graphical interaction), plotting, geometrical operations (rotation, shift, rescale, affine transformation), convex hull, discretisation and pixellation, Dirichlet tessellation, Delaunay triangulation, pairwise distances, nearest-neighbour distances, distance transform, morphological operations (erosion, dilation, closing, opening), quadrat counting, geometrical measurement, geometrical covariance, colour maps, calculus on spatial domains, Gaussian blur, level sets of images, transects of images, intersections between objects, minimum distance matching. (Excludes spatial data on a network, which are supported by the package 'spatstat.linnet'.)",
"License": "GPL (>= 2)",
"URL": "http://spatstat.org/",
"NeedsCompilation": "yes",
"ByteCompile": "true",
"BugReports": "https://github.com/spatstat/spatstat.geom/issues",
"Author": "Adrian Baddeley [aut, cre, cph] (<https://orcid.org/0000-0001-9499-8382>), Rolf Turner [aut, cph] (<https://orcid.org/0000-0001-5521-5218>), Ege Rubak [aut, cph] (<https://orcid.org/0000-0002-6675-533X>), Tilman Davies [ctb], Ute Hahn [ctb], Abdollah Jalilian [ctb], Greg McSwiggan [ctb, cph], Sebastian Meyer [ctb, cph], Jens Oehlschlaegel [ctb, cph], Suman Rakshit [ctb], Dominic Schuhmacher [ctb], Rasmus Waagepetersen [ctb]",
"Repository": "CRAN",
"Encoding": "UTF-8"
},
"spatstat.random": {
"Package": "spatstat.random",
"Version": "3.3-2",
"Source": "Repository",
"Date": "2024-09-18",
"Title": "Random Generation Functionality for the 'spatstat' Family",
"Authors@R": "c(person(\"Adrian\", \"Baddeley\", role = c(\"aut\", \"cre\", \"cph\"), email = \"Adrian.Baddeley@curtin.edu.au\", comment = c(ORCID=\"0000-0001-9499-8382\")), person(\"Rolf\", \"Turner\", role = c(\"aut\", \"cph\"), email=\"rolfturner@posteo.net\", comment=c(ORCID=\"0000-0001-5521-5218\")), person(\"Ege\", \"Rubak\", role = c(\"aut\", \"cph\"), email = \"rubak@math.aau.dk\", comment=c(ORCID=\"0000-0002-6675-533X\")), person(\"Tilman\", \"Davies\", role = c(\"aut\", \"cph\"), comment=c(ORCID=\"0000-0003-0565-1825\")), person(\"Kasper\", \"Klitgaard Berthelsen\", role = c(\"ctb\", \"cph\")), person(\"David\", \"Bryant\", role = c(\"ctb\", \"cph\")), person(\"Ya-Mei\", \"Chang\", role = c(\"ctb\", \"cph\"), email = \"yamei628@gmail.com\"), person(\"Ute\", \"Hahn\", role = \"ctb\"), person(\"Abdollah\", \"Jalilian\", role = \"ctb\"), person(\"Dominic\", \"Schuhmacher\", role = c(\"ctb\", \"cph\")), person(\"Rasmus\", \"Plenge Waagepetersen\", role = c(\"ctb\", \"cph\")))",
"Maintainer": "Adrian Baddeley <Adrian.Baddeley@curtin.edu.au>",
"Depends": [
"R (>= 3.5.0)",
"spatstat.data (>= 3.1)",
"spatstat.univar (>= 3.0-0)",
"spatstat.geom (>= 3.3-0)",
"stats",
"utils",
"methods",
"grDevices"
],
"Imports": [
"spatstat.utils (>= 3.1-0)"
],
"Suggests": [
"spatial",
"spatstat.linnet (>= 3.1-5)",
"spatstat.explore",
"spatstat.model",
"spatstat (>= 3.0)",
"gsl"
],
"Description": "Functionality for random generation of spatial data in the 'spatstat' family of packages. Generates random spatial patterns of points according to many simple rules (complete spatial randomness, Poisson, binomial, random grid, systematic, cell), randomised alteration of patterns (thinning, random shift, jittering), simulated realisations of random point processes including simple sequential inhibition, Matern inhibition models, Neyman-Scott cluster processes (using direct, Brix-Kendall, or hybrid algorithms), log-Gaussian Cox processes, product shot noise cluster processes and Gibbs point processes (using Metropolis-Hastings birth-death-shift algorithm, alternating Gibbs sampler, or coupling-from-the-past perfect simulation). Also generates random spatial patterns of line segments, random tessellations, and random images (random noise, random mosaics). Excludes random generation on a linear network, which is covered by the separate package 'spatstat.linnet'.",
"License": "GPL (>= 2)",
"URL": "http://spatstat.org/",
"NeedsCompilation": "yes",
"ByteCompile": "true",
"BugReports": "https://github.com/spatstat/spatstat.random/issues",
"Author": "Adrian Baddeley [aut, cre, cph] (<https://orcid.org/0000-0001-9499-8382>), Rolf Turner [aut, cph] (<https://orcid.org/0000-0001-5521-5218>), Ege Rubak [aut, cph] (<https://orcid.org/0000-0002-6675-533X>), Tilman Davies [aut, cph] (<https://orcid.org/0000-0003-0565-1825>), Kasper Klitgaard Berthelsen [ctb, cph], David Bryant [ctb, cph], Ya-Mei Chang [ctb, cph], Ute Hahn [ctb], Abdollah Jalilian [ctb], Dominic Schuhmacher [ctb, cph], Rasmus Plenge Waagepetersen [ctb, cph]",
"Repository": "CRAN",
"Encoding": "UTF-8"
},
"spatstat.sparse": {
"Package": "spatstat.sparse",
"Version": "3.1-0",
"Source": "Repository",
"Date": "2024-06-21",
"Title": "Sparse Three-Dimensional Arrays and Linear Algebra Utilities",
"Authors@R": "c(person(\"Adrian\", \"Baddeley\", role = c(\"aut\", \"cre\", \"cph\"), email = \"Adrian.Baddeley@curtin.edu.au\", comment = c(ORCID=\"0000-0001-9499-8382\")), person(\"Rolf\", \"Turner\", role = c(\"aut\", \"cph\"), email=\"rolfturner@posteo.net\", comment=c(ORCID=\"0000-0001-5521-5218\")), person(\"Ege\", \"Rubak\", role = c(\"aut\", \"cph\"), email = \"rubak@math.aau.dk\", comment=c(ORCID=\"0000-0002-6675-533X\")))",
"Maintainer": "Adrian Baddeley <Adrian.Baddeley@curtin.edu.au>",
"Depends": [
"R (>= 3.5.0)",
"stats",
"utils",
"methods",
"Matrix",
"abind",
"tensor"
],
"Imports": [
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"Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\")), person(\"Davis\", \"Vaughan\", , \"davis@posit.co\", role = \"aut\"), person(\"Maximilian\", \"Girlich\", role = \"aut\"), person(\"Kevin\", \"Ushey\", , \"kevin@posit.co\", role = \"ctb\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "Tools to help to create tidy data, where each column is a variable, each row is an observation, and each cell contains a single value. 'tidyr' contains tools for changing the shape (pivoting) and hierarchy (nesting and 'unnesting') of a dataset, turning deeply nested lists into rectangular data frames ('rectangling'), and extracting values out of string columns. It also includes tools for working with missing values (both implicit and explicit).",
"License": "MIT + file LICENSE",
"URL": "https://tidyr.tidyverse.org, https://github.com/tidyverse/tidyr",
"BugReports": "https://github.com/tidyverse/tidyr/issues",
"Depends": [
"R (>= 3.6)"
],
"Imports": [
"cli (>= 3.4.1)",
"dplyr (>= 1.0.10)",
"glue",
"lifecycle (>= 1.0.3)",
"magrittr",
"purrr (>= 1.0.1)",
"rlang (>= 1.1.1)",
"stringr (>= 1.5.0)",
"tibble (>= 2.1.1)",
"tidyselect (>= 1.2.0)",
"utils",
"vctrs (>= 0.5.2)"
],
"Suggests": [
"covr",
"data.table",
"knitr",
"readr",
"repurrrsive (>= 1.1.0)",
"rmarkdown",
"testthat (>= 3.0.0)"
],
"LinkingTo": [
"cpp11 (>= 0.4.0)"
],
"VignetteBuilder": "knitr",
"Config/Needs/website": "tidyverse/tidytemplate",
"Config/testthat/edition": "3",
"Encoding": "UTF-8",
"LazyData": "true",
"RoxygenNote": "7.3.0",
"NeedsCompilation": "yes",
"Author": "Hadley Wickham [aut, cre], Davis Vaughan [aut], Maximilian Girlich [aut], Kevin Ushey [ctb], Posit Software, PBC [cph, fnd]",
"Maintainer": "Hadley Wickham <hadley@posit.co>",
"Repository": "CRAN"
},
"tidyselect": {
"Package": "tidyselect",
"Version": "1.2.1",
"Source": "Repository",
"Title": "Select from a Set of Strings",
"Authors@R": "c( person(\"Lionel\", \"Henry\", , \"lionel@posit.co\", role = c(\"aut\", \"cre\")), person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "A backend for the selecting functions of the 'tidyverse'. It makes it easy to implement select-like functions in your own packages in a way that is consistent with other 'tidyverse' interfaces for selection.",
"License": "MIT + file LICENSE",
"URL": "https://tidyselect.r-lib.org, https://github.com/r-lib/tidyselect",
"BugReports": "https://github.com/r-lib/tidyselect/issues",
"Depends": [
"R (>= 3.4)"
],
"Imports": [
"cli (>= 3.3.0)",
"glue (>= 1.3.0)",
"lifecycle (>= 1.0.3)",
"rlang (>= 1.0.4)",
"vctrs (>= 0.5.2)",
"withr"
],
"Suggests": [
"covr",
"crayon",
"dplyr",
"knitr",
"magrittr",
"rmarkdown",
"stringr",
"testthat (>= 3.1.1)",
"tibble (>= 2.1.3)"
],
"VignetteBuilder": "knitr",
"ByteCompile": "true",
"Config/testthat/edition": "3",
"Config/Needs/website": "tidyverse/tidytemplate",
"Encoding": "UTF-8",
"RoxygenNote": "7.3.0.9000",
"NeedsCompilation": "yes",
"Author": "Lionel Henry [aut, cre], Hadley Wickham [aut], Posit Software, PBC [cph, fnd]",
"Maintainer": "Lionel Henry <lionel@posit.co>",
"Repository": "CRAN"
},
"tinytex": {
"Package": "tinytex",
"Version": "0.56",
"Source": "Repository",
"Type": "Package",
"Title": "Helper Functions to Install and Maintain TeX Live, and Compile LaTeX Documents",
"Authors@R": "c( person(\"Yihui\", \"Xie\", role = c(\"aut\", \"cre\", \"cph\"), email = \"xie@yihui.name\", comment = c(ORCID = \"0000-0003-0645-5666\")), person(given = \"Posit Software, PBC\", role = c(\"cph\", \"fnd\")), person(\"Christophe\", \"Dervieux\", role = \"ctb\", comment = c(ORCID = \"0000-0003-4474-2498\")), person(\"Devon\", \"Ryan\", role = \"ctb\", email = \"dpryan79@gmail.com\", comment = c(ORCID = \"0000-0002-8549-0971\")), person(\"Ethan\", \"Heinzen\", role = \"ctb\"), person(\"Fernando\", \"Cagua\", role = \"ctb\"), person() )",
"Description": "Helper functions to install and maintain the 'LaTeX' distribution named 'TinyTeX' (<https://yihui.org/tinytex/>), a lightweight, cross-platform, portable, and easy-to-maintain version of 'TeX Live'. This package also contains helper functions to compile 'LaTeX' documents, and install missing 'LaTeX' packages automatically.",
"Imports": [
"xfun (>= 0.48)"
],
"Suggests": [
"testit",
"rstudioapi"
],
"License": "MIT + file LICENSE",
"URL": "https://github.com/rstudio/tinytex",
"BugReports": "https://github.com/rstudio/tinytex/issues",
"Encoding": "UTF-8",
"RoxygenNote": "7.3.2",
"NeedsCompilation": "no",
"Author": "Yihui Xie [aut, cre, cph] (<https://orcid.org/0000-0003-0645-5666>), Posit Software, PBC [cph, fnd], Christophe Dervieux [ctb] (<https://orcid.org/0000-0003-4474-2498>), Devon Ryan [ctb] (<https://orcid.org/0000-0002-8549-0971>), Ethan Heinzen [ctb], Fernando Cagua [ctb]",
"Maintainer": "Yihui Xie <xie@yihui.name>",
"Repository": "CRAN"
},
"tzdb": {
"Package": "tzdb",
"Version": "0.4.0",
"Source": "Repository",
"Title": "Time Zone Database Information",
"Authors@R": "c( person(\"Davis\", \"Vaughan\", , \"davis@posit.co\", role = c(\"aut\", \"cre\")), person(\"Howard\", \"Hinnant\", role = \"cph\", comment = \"Author of the included date library\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "Provides an up-to-date copy of the Internet Assigned Numbers Authority (IANA) Time Zone Database. It is updated periodically to reflect changes made by political bodies to time zone boundaries, UTC offsets, and daylight saving time rules. Additionally, this package provides a C++ interface for working with the 'date' library. 'date' provides comprehensive support for working with dates and date-times, which this package exposes to make it easier for other R packages to utilize. Headers are provided for calendar specific calculations, along with a limited interface for time zone manipulations.",
"License": "MIT + file LICENSE",
"URL": "https://tzdb.r-lib.org, https://github.com/r-lib/tzdb",
"BugReports": "https://github.com/r-lib/tzdb/issues",
"Depends": [
"R (>= 3.5.0)"
],
"Suggests": [
"covr",
"testthat (>= 3.0.0)"
],
"LinkingTo": [
"cpp11 (>= 0.4.2)"
],
"Biarch": "yes",
"Config/Needs/website": "tidyverse/tidytemplate",
"Config/testthat/edition": "3",
"Encoding": "UTF-8",
"RoxygenNote": "7.2.3",
"NeedsCompilation": "yes",
"Author": "Davis Vaughan [aut, cre], Howard Hinnant [cph] (Author of the included date library), Posit Software, PBC [cph, fnd]",
"Maintainer": "Davis Vaughan <davis@posit.co>",
"Repository": "CRAN"
},
"urlchecker": {
"Package": "urlchecker",
"Version": "1.0.1",
"Source": "Repository",
"Title": "Run CRAN URL Checks from Older R Versions",
"Authors@R": "c( person(\"R Core team\", role = \"aut\", comment = \"The code in urltools.R adapted from the tools package\"), person(\"Jim\", \"Hester\", role = \"aut\", comment = c(ORCID = \"0000-0002-2739-7082\")), person(\"Gábor\", \"Csárdi\", , \"csardi.gabor@gmail.com\", role = c(\"aut\", \"cre\")), person(\"RStudio\", role = c(\"cph\", \"fnd\")) )",
"Description": "Provide the URL checking tools available in R 4.1+ as a package for earlier versions of R. Also uses concurrent requests so can be much faster than the serial versions.",
"License": "GPL-3",
"URL": "https://github.com/r-lib/urlchecker",
"BugReports": "https://github.com/r-lib/urlchecker/issues",
"Depends": [
"R (>= 3.3)"
],
"Imports": [
"cli",
"curl",
"tools",
"xml2"
],
"Suggests": [
"covr"
],
"Encoding": "UTF-8",
"RoxygenNote": "7.1.2",
"NeedsCompilation": "no",
"Author": "R Core team [aut] (The code in urltools.R adapted from the tools package), Jim Hester [aut] (<https://orcid.org/0000-0002-2739-7082>), Gábor Csárdi [aut, cre], RStudio [cph, fnd]",
"Maintainer": "Gábor Csárdi <csardi.gabor@gmail.com>",
"Repository": "CRAN"
},
"usethis": {
"Package": "usethis",
"Version": "3.1.0",
"Source": "Repository",
"Title": "Automate Package and Project Setup",
"Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Jennifer\", \"Bryan\", , \"jenny@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-6983-2759\")), person(\"Malcolm\", \"Barrett\", , \"malcolmbarrett@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0003-0299-5825\")), person(\"Andy\", \"Teucher\", , \"andy.teucher@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0002-7840-692X\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "Automate package and project setup tasks that are otherwise performed manually. This includes setting up unit testing, test coverage, continuous integration, Git, 'GitHub', licenses, 'Rcpp', 'RStudio' projects, and more.",
"License": "MIT + file LICENSE",
"URL": "https://usethis.r-lib.org, https://github.com/r-lib/usethis",
"BugReports": "https://github.com/r-lib/usethis/issues",
"Depends": [
"R (>= 3.6)"
],
"Imports": [
"cli (>= 3.0.1)",
"clipr (>= 0.3.0)",
"crayon",
"curl (>= 2.7)",
"desc (>= 1.4.2)",
"fs (>= 1.3.0)",
"gert (>= 1.4.1)",
"gh (>= 1.2.1)",
"glue (>= 1.3.0)",
"jsonlite",
"lifecycle (>= 1.0.0)",
"purrr",
"rappdirs",
"rlang (>= 1.1.0)",
"rprojroot (>= 1.2)",
"rstudioapi",
"stats",
"tools",
"utils",
"whisker",
"withr (>= 2.3.0)",
"yaml"
],
"Suggests": [
"covr",
"knitr",
"magick",
"pkgload (>= 1.3.2.1)",
"rmarkdown",
"roxygen2 (>= 7.1.2)",
"spelling (>= 1.2)",
"styler (>= 1.2.0)",
"testthat (>= 3.1.8)"
],
"Config/Needs/website": "r-lib/asciicast, tidyverse/tidytemplate, xml2",
"Config/testthat/edition": "3",
"Config/testthat/parallel": "TRUE",
"Config/testthat/start-first": "github-actions, release",
"Encoding": "UTF-8",
"Language": "en-US",
"RoxygenNote": "7.3.2",
"NeedsCompilation": "no",
"Author": "Hadley Wickham [aut] (<https://orcid.org/0000-0003-4757-117X>), Jennifer Bryan [aut, cre] (<https://orcid.org/0000-0002-6983-2759>), Malcolm Barrett [aut] (<https://orcid.org/0000-0003-0299-5825>), Andy Teucher [aut] (<https://orcid.org/0000-0002-7840-692X>), Posit Software, PBC [cph, fnd]",
"Maintainer": "Jennifer Bryan <jenny@posit.co>",
"Repository": "CRAN"
},
"utf8": {
"Package": "utf8",
"Version": "1.2.4",
"Source": "Repository",
"Title": "Unicode Text Processing",
"Authors@R": "c(person(given = c(\"Patrick\", \"O.\"), family = \"Perry\", role = c(\"aut\", \"cph\")), person(given = \"Kirill\", family = \"M\\u00fcller\", role = \"cre\", email = \"kirill@cynkra.com\"), person(given = \"Unicode, Inc.\", role = c(\"cph\", \"dtc\"), comment = \"Unicode Character Database\"))",
"Description": "Process and print 'UTF-8' encoded international text (Unicode). Input, validate, normalize, encode, format, and display.",
"License": "Apache License (== 2.0) | file LICENSE",
"URL": "https://ptrckprry.com/r-utf8/, https://github.com/patperry/r-utf8",
"BugReports": "https://github.com/patperry/r-utf8/issues",
"Depends": [
"R (>= 2.10)"
],
"Suggests": [
"cli",
"covr",
"knitr",
"rlang",
"rmarkdown",
"testthat (>= 3.0.0)",
"withr"
],
"VignetteBuilder": "knitr, rmarkdown",
"Config/testthat/edition": "3",
"Encoding": "UTF-8",
"RoxygenNote": "7.2.3",
"NeedsCompilation": "yes",
"Author": "Patrick O. Perry [aut, cph], Kirill Müller [cre], Unicode, Inc. [cph, dtc] (Unicode Character Database)",
"Maintainer": "Kirill Müller <kirill@cynkra.com>",
"Repository": "CRAN"
},
"uwot": {
"Package": "uwot",
"Version": "0.2.3",
"Source": "Repository",
"Title": "The Uniform Manifold Approximation and Projection (UMAP) Method for Dimensionality Reduction",
"Authors@R": "c( person(\"James\", \"Melville\", , \"jlmelville@gmail.com\", role = c(\"aut\", \"cre\", \"cph\")), person(\"Aaron\", \"Lun\", role = \"ctb\"), person(\"Mohamed Nadhir\", \"Djekidel\", role = \"ctb\"), person(\"Yuhan\", \"Hao\", role = \"ctb\"), person(\"Dirk\", \"Eddelbuettel\", role = \"ctb\"), person(\"Wouter\", \"van der Bijl\", role = \"ctb\") )",
"Description": "An implementation of the Uniform Manifold Approximation and Projection dimensionality reduction by McInnes et al. (2018) <doi:10.48550/arXiv.1802.03426>. It also provides means to transform new data and to carry out supervised dimensionality reduction. An implementation of the related LargeVis method of Tang et al. (2016) <doi:10.48550/arXiv.1602.00370> is also provided. This is a complete re-implementation in R (and C++, via the 'Rcpp' package): no Python installation is required. See the uwot website (<https://github.com/jlmelville/uwot>) for more documentation and examples.",
"License": "GPL (>= 3)",
"URL": "https://github.com/jlmelville/uwot, https://jlmelville.github.io/uwot/",
"BugReports": "https://github.com/jlmelville/uwot/issues",
"Depends": [
"Matrix"
],
"Imports": [
"FNN",
"irlba",
"methods",
"Rcpp",
"RcppAnnoy (>= 0.0.17)",
"RSpectra"
],
"Suggests": [
"bigstatsr",
"covr",
"knitr",
"RcppHNSW",
"rmarkdown",
"rnndescent",
"testthat"
],
"LinkingTo": [
"dqrng",
"Rcpp",
"RcppAnnoy",
"RcppProgress"
],
"VignetteBuilder": "knitr",
"Config/Needs/website": "rmarkdown",
"Encoding": "UTF-8",
"RoxygenNote": "7.3.2",
"NeedsCompilation": "yes",
"Author": "James Melville [aut, cre, cph], Aaron Lun [ctb], Mohamed Nadhir Djekidel [ctb], Yuhan Hao [ctb], Dirk Eddelbuettel [ctb], Wouter van der Bijl [ctb]",
"Maintainer": "James Melville <jlmelville@gmail.com>",
"Repository": "CRAN"
},
"vctrs": {
"Package": "vctrs",
"Version": "0.6.5",
"Source": "Repository",
"Title": "Vector Helpers",
"Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\"), person(\"Lionel\", \"Henry\", , \"lionel@posit.co\", role = \"aut\"), person(\"Davis\", \"Vaughan\", , \"davis@posit.co\", role = c(\"aut\", \"cre\")), person(\"data.table team\", role = \"cph\", comment = \"Radix sort based on data.table's forder() and their contribution to R's order()\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "Defines new notions of prototype and size that are used to provide tools for consistent and well-founded type-coercion and size-recycling, and are in turn connected to ideas of type- and size-stability useful for analysing function interfaces.",
"License": "MIT + file LICENSE",
"URL": "https://vctrs.r-lib.org/, https://github.com/r-lib/vctrs",
"BugReports": "https://github.com/r-lib/vctrs/issues",
"Depends": [
"R (>= 3.5.0)"
],
"Imports": [
"cli (>= 3.4.0)",
"glue",
"lifecycle (>= 1.0.3)",
"rlang (>= 1.1.0)"
],
"Suggests": [
"bit64",
"covr",
"crayon",
"dplyr (>= 0.8.5)",
"generics",
"knitr",
"pillar (>= 1.4.4)",
"pkgdown (>= 2.0.1)",
"rmarkdown",
"testthat (>= 3.0.0)",
"tibble (>= 3.1.3)",
"waldo (>= 0.2.0)",
"withr",
"xml2",
"zeallot"
],
"VignetteBuilder": "knitr",
"Config/Needs/website": "tidyverse/tidytemplate",
"Config/testthat/edition": "3",
"Encoding": "UTF-8",
"Language": "en-GB",
"RoxygenNote": "7.2.3",
"NeedsCompilation": "yes",
"Author": "Hadley Wickham [aut], Lionel Henry [aut], Davis Vaughan [aut, cre], data.table team [cph] (Radix sort based on data.table's forder() and their contribution to R's order()), Posit Software, PBC [cph, fnd]",
"Maintainer": "Davis Vaughan <davis@posit.co>",
"Repository": "CRAN"
},
"viridisLite": {
"Package": "viridisLite",
"Version": "0.4.2",
"Source": "Repository",
"Type": "Package",
"Title": "Colorblind-Friendly Color Maps (Lite Version)",
"Date": "2023-05-02",
"Authors@R": "c( person(\"Simon\", \"Garnier\", email = \"garnier@njit.edu\", role = c(\"aut\", \"cre\")), person(\"Noam\", \"Ross\", email = \"noam.ross@gmail.com\", role = c(\"ctb\", \"cph\")), person(\"Bob\", \"Rudis\", email = \"bob@rud.is\", role = c(\"ctb\", \"cph\")), person(\"Marco\", \"Sciaini\", email = \"sciaini.marco@gmail.com\", role = c(\"ctb\", \"cph\")), person(\"Antônio Pedro\", \"Camargo\", role = c(\"ctb\", \"cph\")), person(\"Cédric\", \"Scherer\", email = \"scherer@izw-berlin.de\", role = c(\"ctb\", \"cph\")) )",
"Maintainer": "Simon Garnier <garnier@njit.edu>",
"Description": "Color maps designed to improve graph readability for readers with common forms of color blindness and/or color vision deficiency. The color maps are also perceptually-uniform, both in regular form and also when converted to black-and-white for printing. This is the 'lite' version of the 'viridis' package that also contains 'ggplot2' bindings for discrete and continuous color and fill scales and can be found at <https://cran.r-project.org/package=viridis>.",
"License": "MIT + file LICENSE",
"Encoding": "UTF-8",
"Depends": [
"R (>= 2.10)"
],
"Suggests": [
"hexbin (>= 1.27.0)",
"ggplot2 (>= 1.0.1)",
"testthat",
"covr"
],
"URL": "https://sjmgarnier.github.io/viridisLite/, https://github.com/sjmgarnier/viridisLite/",
"BugReports": "https://github.com/sjmgarnier/viridisLite/issues/",
"RoxygenNote": "7.2.3",
"NeedsCompilation": "no",
"Author": "Simon Garnier [aut, cre], Noam Ross [ctb, cph], Bob Rudis [ctb, cph], Marco Sciaini [ctb, cph], Antônio Pedro Camargo [ctb, cph], Cédric Scherer [ctb, cph]",
"Repository": "CRAN"
},
"vroom": {
"Package": "vroom",
"Version": "1.6.5",
"Source": "Repository",
"Title": "Read and Write Rectangular Text Data Quickly",
"Authors@R": "c( person(\"Jim\", \"Hester\", role = \"aut\", comment = c(ORCID = \"0000-0002-2739-7082\")), person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Jennifer\", \"Bryan\", , \"jenny@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-6983-2759\")), person(\"Shelby\", \"Bearrows\", role = \"ctb\"), person(\"https://github.com/mandreyel/\", role = \"cph\", comment = \"mio library\"), person(\"Jukka\", \"Jylänki\", role = \"cph\", comment = \"grisu3 implementation\"), person(\"Mikkel\", \"Jørgensen\", role = \"cph\", comment = \"grisu3 implementation\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "The goal of 'vroom' is to read and write data (like 'csv', 'tsv' and 'fwf') quickly. When reading it uses a quick initial indexing step, then reads the values lazily , so only the data you actually use needs to be read. The writer formats the data in parallel and writes to disk asynchronously from formatting.",
"License": "MIT + file LICENSE",
"URL": "https://vroom.r-lib.org, https://github.com/tidyverse/vroom",
"BugReports": "https://github.com/tidyverse/vroom/issues",
"Depends": [
"R (>= 3.6)"
],
"Imports": [
"bit64",
"cli (>= 3.2.0)",
"crayon",
"glue",
"hms",
"lifecycle (>= 1.0.3)",
"methods",
"rlang (>= 0.4.2)",
"stats",
"tibble (>= 2.0.0)",
"tidyselect",
"tzdb (>= 0.1.1)",
"vctrs (>= 0.2.0)",
"withr"
],
"Suggests": [
"archive",
"bench (>= 1.1.0)",
"covr",
"curl",
"dplyr",
"forcats",
"fs",
"ggplot2",
"knitr",
"patchwork",
"prettyunits",
"purrr",
"rmarkdown",
"rstudioapi",
"scales",
"spelling",
"testthat (>= 2.1.0)",
"tidyr",
"utils",
"waldo",
"xml2"
],
"LinkingTo": [
"cpp11 (>= 0.2.0)",
"progress (>= 1.2.1)",
"tzdb (>= 0.1.1)"
],
"VignetteBuilder": "knitr",
"Config/Needs/website": "nycflights13, tidyverse/tidytemplate",
"Config/testthat/edition": "3",
"Config/testthat/parallel": "false",
"Copyright": "file COPYRIGHTS",
"Encoding": "UTF-8",
"Language": "en-US",
"RoxygenNote": "7.2.3.9000",
"NeedsCompilation": "yes",
"Author": "Jim Hester [aut] (<https://orcid.org/0000-0002-2739-7082>), Hadley Wickham [aut] (<https://orcid.org/0000-0003-4757-117X>), Jennifer Bryan [aut, cre] (<https://orcid.org/0000-0002-6983-2759>), Shelby Bearrows [ctb], https://github.com/mandreyel/ [cph] (mio library), Jukka Jylänki [cph] (grisu3 implementation), Mikkel Jørgensen [cph] (grisu3 implementation), Posit Software, PBC [cph, fnd]",
"Maintainer": "Jennifer Bryan <jenny@posit.co>",
"Repository": "CRAN"
},
"waldo": {
"Package": "waldo",
"Version": "0.6.1",
"Source": "Repository",
"Title": "Find Differences Between R Objects",
"Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "Compare complex R objects and reveal the key differences. Designed particularly for use in testing packages where being able to quickly isolate key differences makes understanding test failures much easier.",
"License": "MIT + file LICENSE",
"URL": "https://waldo.r-lib.org, https://github.com/r-lib/waldo",
"BugReports": "https://github.com/r-lib/waldo/issues",
"Depends": [
"R (>= 4.0)"
],
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