Metadata-Version: 2.1
Name: pathflowai
Version: 0.1.1
Summary: A modular approach for preprocessing and deep learning on histopathology images.
Home-page: https://github.com/jlevy44/PathFlowAI
Author: Joshua Levy
Author-email: joshualevy44@berkeley.edu
License: MIT
Description: <h1 align="center">Welcome to PathFlowAI 👋</h1>
        <p>
          <img alt="Version" src="https://img.shields.io/badge/version-0.1-blue.svg?cacheSeconds=2592000" />
          <a href="https://jlevy44.github.io/PathFlowAI/">
            <img alt="Documentation" src="https://img.shields.io/badge/documentation-yes-brightgreen.svg" target="_blank" />
          </a>
        </p>
        
        > A Convenient High-Throughput Workflow for Preprocessing, Deep Learning Analytics and Interpretation in Digital Pathology
        
        ### 🏠 [Homepage](https://github.com/jlevy44/PathFlowAI)
        
        NOTE: MedRxiv manuscript and set-up wiki will be posted on this repository shortly! Stay tuned!
        
        ## Install
        
        First, install [openslide](https://openslide.org/download/).
        
        ```sh
        pip install pathflowai
        ```
        
        ## Usage
        
        ```sh
        pathflowai-preprocess -h
        pathflowai-train_model -h
        pathflowai-monitor -h
        pathflowai-visualize -h
        ```
        
        See [Wiki](https://github.com/jlevy44/PathFlowAI/wiki) for more information on setting up and running the workflow.
        
        ## Author
        
        👤 **Joshua Levy**
        
        * Github: [@jlevy44](https://github.com/jlevy44)
        
        ## 🤝 Contributing
        
        Contributions, issues and feature requests are welcome!<br />Feel free to check [issues page](https://github.com/jlevy44/PathFlowAI/issues).
        
        ![1](https://user-images.githubusercontent.com/19698023/62230963-0199d780-b391-11e9-96eb-ac9b86686723.jpeg)
        ![2](https://user-images.githubusercontent.com/19698023/62231545-41ad8a00-b392-11e9-8d47-f9f83f4b764a.jpeg)
        ![3](https://user-images.githubusercontent.com/19698023/62231546-41ad8a00-b392-11e9-9b16-ea3b2b92bf3f.jpeg)
        ![4](https://user-images.githubusercontent.com/19698023/62230966-02326e00-b391-11e9-989c-155ff0a9be67.jpeg)
        
Platform: UNKNOWN
Description-Content-Type: text/markdown