"""
Sphinx configuration.

*********************
"""

# Configuration file for the Sphinx documentation builder.
#
# This file only contains a selection of the most common options. For a full
# list see the documentation:
# https://www.sphinx-doc.org/en/master/usage/configuration.html

# -- Path setup --------------------------------------------------------------

# If extensions (or modules to document with autodoc) are in another directory,
# add these directories to sys.path here. If the directory is relative to the
# documentation root, use os.path.abspath to make it absolute, like shown here.
#
import sphinx_rtd_theme
import os
import sys
sys.path.insert(0, os.path.abspath('../..'))


# -- Project information -----------------------------------------------------

project = 'pathaia'
copyright = '2020, arnaud abreu'
author = 'arnaud abreu'

# The full version, including alpha/beta/rc tags
release = '0.1'


# -- General configuration ---------------------------------------------------

# Add any Sphinx extension module names here, as strings. They can be
# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
# ones.
extensions = []
extensions.append("sphinx.ext.autodoc")
extensions.append("sphinx.ext.napoleon")
extensions.append("sphinx_autodoc_typehints")

add_module_names = False

# Add any paths that contain templates here, relative to this directory.
templates_path = ['_templates']

# List of patterns, relative to source directory, that match files and
# directories to ignore when looking for source files.
# This pattern also affects html_static_path and html_extra_path.
exclude_patterns = []
autodoc_member_order = 'bysource'
autodoc_mock_imports = ["fastcore",
                        "numpy",
                        "tqdm",
                        "openslide",
                        "cv2",
                        "skimage",
                        "matplotlib",
                        "nptyping",
                        "pandas",
                        "sklearn",
                        "tensorflow"
                        ]


# -- Options for HTML output -------------------------------------------------

# The theme to use for HTML and HTML Help pages.  See the documentation for
# a list of builtin themes.
#
# html_theme = 'alabaster'

html_theme = 'sphinx_rtd_theme'

html_theme_path = [sphinx_rtd_theme.get_html_theme_path()]

# Add any paths that contain custom static files (such as style sheets) here,
# relative to this directory. They are copied after the builtin static files,
# so a file named "default.css" will overwrite the builtin "default.css".
html_static_path = ['_static']