% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/DIscBIO-generic-clusteringOrder.R
\name{KmeanOrder}
\alias{KmeanOrder}
\alias{KmeanOrder,DISCBIO-method}
\title{Pseudo-time ordering based on k-means clusters}
\usage{
KmeanOrder(
  object,
  quiet = FALSE,
  export = FALSE,
  filename = "Cellular_pseudo-time_ordering_based_on_k-meansc-lusters"
)

\S4method{KmeanOrder}{DISCBIO}(
  object,
  quiet = FALSE,
  export = FALSE,
  filename = "Cellular_pseudo-time_ordering_based_on_k-meansc-lusters"
)
}
\arguments{
\item{object}{\code{DISCBIO} class object.}

\item{quiet}{if `TRUE`, suppresses intermediary output}

\item{export}{if `TRUE`, exports order table to csv}

\item{filename}{Name of the exported file (if `export=TRUE`)}
}
\value{
The DISCBIO-class object input with the kordering slot filled.
}
\description{
This function takes the exact output of exprmclust function and
  construct Pseudo-time ordering by mapping all cells onto the path that
  connects cluster centers.
}
\note{
This function has been replaced by pseudoTimeOrdering(), but it is
  being kept for legacy purposes. It will, however, be removed from future
  versions of DIscBIO.
}