--- a
+++ b/man/pseudoTimeOrdering.Rd
@@ -0,0 +1,38 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/DIscBIO-generic-pseudoTimeOrdering.R
+\name{pseudoTimeOrdering}
+\alias{pseudoTimeOrdering}
+\alias{pseudoTimeOrdering,DISCBIO-method}
+\title{Pseudo-time ordering}
+\usage{
+pseudoTimeOrdering(
+  object,
+  quiet = FALSE,
+  export = FALSE,
+  filename = "Cellular_pseudo-time_ordering"
+)
+
+\S4method{pseudoTimeOrdering}{DISCBIO}(
+  object,
+  quiet = FALSE,
+  export = FALSE,
+  filename = "Cellular_pseudo-time_ordering"
+)
+}
+\arguments{
+\item{object}{\code{DISCBIO} class object.}
+
+\item{quiet}{if `TRUE`, suppresses intermediary output}
+
+\item{export}{if `TRUE`, exports order table to csv}
+
+\item{filename}{Name of the exported file (if `export=TRUE`)}
+}
+\value{
+The DISCBIO-class object input with the kordering slot filled.
+}
+\description{
+This function takes the exact output of exprmclust function and
+  construct Pseudo-time ordering by mapping all cells onto the path that
+  connects cluster centers.
+}