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b/man/plotExptSNE.Rd |
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% Generated by roxygen2: do not edit by hand |
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% Please edit documentation in R/DIscBIO-generic-plotExptSNE.R |
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\name{plotExptSNE} |
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\alias{plotExptSNE} |
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\alias{plotExptSNE,DISCBIO-method} |
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\title{Highlighting gene expression in the t-SNE map} |
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\usage{ |
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plotExptSNE(object, g, n = NULL) |
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\S4method{plotExptSNE}{DISCBIO}(object, g, n = NULL) |
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} |
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\arguments{ |
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\item{object}{\code{DISCBIO} class object.} |
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\item{g}{Individual gene name or vector with a group of gene names |
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corresponding to a subset of valid row names of the \code{ndata} slot of |
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the \code{DISCBIO} object.} |
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\item{n}{String of characters representing the title of the plot. Default is |
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NULL and the first element of \code{g} is chosen.} |
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} |
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\value{ |
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t-SNE plot for one particular gene |
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} |
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\description{ |
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The t-SNE map representation can also be used to analyze |
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expression of a gene or a group of genes, to investigate cluster specific |
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gene expression patterns |
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} |