--- a +++ b/man/plotExptSNE.Rd @@ -0,0 +1,29 @@ +% Generated by roxygen2: do not edit by hand +% Please edit documentation in R/DIscBIO-generic-plotExptSNE.R +\name{plotExptSNE} +\alias{plotExptSNE} +\alias{plotExptSNE,DISCBIO-method} +\title{Highlighting gene expression in the t-SNE map} +\usage{ +plotExptSNE(object, g, n = NULL) + +\S4method{plotExptSNE}{DISCBIO}(object, g, n = NULL) +} +\arguments{ +\item{object}{\code{DISCBIO} class object.} + +\item{g}{Individual gene name or vector with a group of gene names +corresponding to a subset of valid row names of the \code{ndata} slot of +the \code{DISCBIO} object.} + +\item{n}{String of characters representing the title of the plot. Default is +NULL and the first element of \code{g} is chosen.} +} +\value{ +t-SNE plot for one particular gene +} +\description{ +The t-SNE map representation can also be used to analyze + expression of a gene or a group of genes, to investigate cluster specific + gene expression patterns +}