--- a +++ b/man/VolcanoPlot.Rd @@ -0,0 +1,29 @@ +% Generated by roxygen2: do not edit by hand +% Please edit documentation in R/VolcanoPlot.R +\name{VolcanoPlot} +\alias{VolcanoPlot} +\title{Volcano Plot} +\usage{ +VolcanoPlot(object, value = 0.05, name = NULL, fc = 0.5, FS = 0.4) +} +\arguments{ +\item{object}{A data frame showing the differentially expressed genes (DEGs) +in a particular cluster} + +\item{value}{A numeric value of the false discovery rate. Default is 0.05.. +Default is 0.05} + +\item{name}{A string vector showing the name to be used on the plot title} + +\item{fc}{A numeric value of the fold change. Default is 0.5.} + +\item{FS}{A numeric value of the font size. Default is 0.4.} +} +\value{ +A volcano plot +} +\description{ +Plotting differentially expressed genes (DEGs) in a particular + cluster. Volcano plots are used to readily show the DEGs by plotting + significance versus fold-change on the y and x axes, respectively. +}