--- a +++ b/man/PPI.Rd @@ -0,0 +1,25 @@ +% Generated by roxygen2: do not edit by hand +% Please edit documentation in R/PPI.R +\name{PPI} +\alias{PPI} +\title{Defining protein-protein interactions (PPI) over a list of genes,} +\usage{ +PPI(data, FileName = NULL, species = "9606") +} +\arguments{ +\item{data}{A gene list.} + +\item{FileName}{A string vector showing the name to be used to save the +resulted table. If null, no file will be exported} + +\item{species}{The taxonomy name/id. Default is "9606" for Homo sapiens.} +} +\value{ +Either CSV files stored in the user's file system and its +corresponding `data.frame` object in R or and R object containing that +information. +} +\description{ +This function uses STRING-api. The outcome of STRING analysis + will be stored in comma-separated values files. +}