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+++ b/DESCRIPTION
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+Package: DIscBIO
+Date: 2023-11-06
+Title: A User-Friendly Pipeline for Biomarker Discovery in Single-Cell Transcriptomics
+Version: 1.2.2
+Authors@R:
+  c(
+    person(
+      given = "Salim",
+      family = "Ghannoum",
+      role = c("aut", "cph"),
+      email = "salim.ghannoum@medisin.uio.no"
+    ),
+    person(
+      given = "Alvaro",
+      family = "Köhn-Luque",
+      role = c("aut", "ths"),
+      email = "alvaro.kohn-luque@medisin.uio.no"
+    ),
+    person(
+      given = "Waldir",
+      family = "Leoncio",
+      role = c("cre", "aut"),
+      email = "w.l.netto@medisin.uio.no"
+    ),
+    person(
+      given = "Damiano",
+      family = "Fantini",
+      role = c("ctb")
+    )
+  )
+Description: An open, multi-algorithmic pipeline for easy, fast and efficient
+  analysis of cellular sub-populations and the molecular signatures that
+  characterize them. The pipeline consists of four successive steps: data
+  pre-processing, cellular clustering with pseudo-temporal ordering, defining
+  differential expressed genes and biomarker identification. More details on
+  Ghannoum et. al. (2021) <doi:10.3390/ijms22031399>. This package implements
+  extensions of the work published by Ghannoum et. al. (2019)
+  <doi:10.1101/700989>.
+License: MIT + file LICENSE
+Encoding: UTF-8
+Imports: methods, TSCAN, httr, mclust, statmod, igraph,
+  RWeka, vegan, NetIndices, png, grDevices,
+  RColorBrewer, ggplot2, rpart, fpc, cluster, rpart.plot,
+  tsne, AnnotationDbi, org.Hs.eg.db, graphics, stats, utils, impute,
+  withr
+Depends:
+  R (>= 4.0), SingleCellExperiment
+Suggests:
+  testthat,
+  Seurat
+LazyData: true
+RoxygenNote: 7.2.3
+URL: https://github.com/ocbe-uio/DIscBIO
+BugReports: https://github.com/ocbe-uio/DIscBIO/issues
+Collate:
+    'DIscBIO-classes.R'
+    'DIscBIO-generic-ClassVectoringDT.R'
+    'DIscBIO-generic-ClustDiffGenes.R'
+    'DIscBIO-generic-Clustexp.R'
+    'DIscBIO-generic-DEGanalysis.R'
+    'DIscBIO-generic-DEGanalysis2clust.R'
+    'DIscBIO-generic-Exprmclust.R'
+    'DIscBIO-generic-FinalPreprocessing.R'
+    'DIscBIO-generic-FindOutliers.R'
+    'DIscBIO-generic-NoiseFiltering.R'
+    'DIscBIO-generic-Normalizedata.R'
+    'DIscBIO-generic-PCAplotSymbols.R'
+    'DIscBIO-generic-PlotmclustMB.R'
+    'DIscBIO-generic-clusteringOrder.R'
+    'DIscBIO-generic-clustheatmap.R'
+    'DIscBIO-generic-comptSNE.R'
+    'DIscBIO-generic-plotExptSNE.R'
+    'DIscBIO-generic-plotGap.R'
+    'DIscBIO-generic-plotLabelstSNE.R'
+    'DIscBIO-generic-plotOrderTsne.R'
+    'DIscBIO-generic-plotSilhouette.R'
+    'DIscBIO-generic-plotSymbolstSNE.R'
+    'DIscBIO-generic-plottSNE.R'
+    'DIscBIO-generic-pseudoTimeOrdering.R'
+    'J48DT.R'
+    'J48DTeval.R'
+    'Jaccard.R'
+    'NetAnalysis.R'
+    'Networking.R'
+    'PPI.R'
+    'PlotMBpca.R'
+    'RpartDT.R'
+    'RpartEVAL.R'
+    'VolcanoPlot.R'
+    'bootstrap.R'
+    'calc_pcareduceres.R'
+    'cross.val.R'
+    'customConverters.R'
+    'datasets.R'
+    'internal-functions-samr-adapted.R'
+    'internal-functions.R'