--- a +++ b/nbproject/project.properties @@ -0,0 +1,263 @@ +annotation.processing.enabled=true +annotation.processing.enabled.in.editor=false +annotation.processing.processors.list= +annotation.processing.run.all.processors=true +annotation.processing.source.output=${build.generated.sources.dir}/ap-source-output +application.title=biodiscml +application.vendor=Mik +auxiliary.org-netbeans-spi-editor-hints-projects.perProjectHintSettingsFile=nbproject/cfg_hints.xml +build.classes.dir=${build.dir}/classes +build.classes.excludes=**/*.java,**/*.form +# This directory is removed when the project is cleaned: +build.dir=build +build.generated.dir=${build.dir}/generated +build.generated.sources.dir=${build.dir}/generated-sources +# Only compile against the classpath explicitly listed here: +build.sysclasspath=ignore +build.test.classes.dir=${build.dir}/test/classes +build.test.results.dir=${build.dir}/test/results +# Uncomment to specify the preferred debugger connection transport: +#debug.transport=dt_socket +debug.classpath=\ + ${run.classpath} +debug.modulepath=\ + ${run.modulepath} +debug.test.classpath=\ + ${run.test.classpath} +debug.test.modulepath=\ + ${run.test.modulepath} +# Files in build.classes.dir which should be excluded from distribution jar +dist.archive.excludes= +# This directory is removed when the project is cleaned: +dist.dir=dist +dist.jar=${dist.dir}/biodiscml.jar +dist.javadoc.dir=${dist.dir}/javadoc +dist.jlink.dir=${dist.dir}/jlink +dist.jlink.output=${dist.jlink.dir}/biodiscml +endorsed.classpath= +excludes= +file.reference.alternatingDecisionTrees.jar=lib/weka/alternatingDecisionTrees.jar +file.reference.alternatingModelTrees.jar=lib/weka/alternatingModelTrees.jar +file.reference.AnDE.jar=lib/weka/AnDE.jar +file.reference.bestFirstTree.jar=lib/weka/bestFirstTree.jar +file.reference.CHIRP.jar=lib/weka/CHIRP.jar +file.reference.classificationViaClustering.jar=lib/weka/classificationViaClustering.jar +file.reference.clojure-1.5.1.jar=lib/weka/clojure-1.5.1.jar +file.reference.clojure-utils-0.2.3.jar=lib/weka/clojure-utils-0.2.3.jar +file.reference.clojureClassifier.jar=lib/weka/clojureClassifier.jar +file.reference.commons-codec-1.3.jar=lib/weka/commons-codec-1.3.jar +file.reference.commons-io-2.8.0-javadoc.jar=lib/commons-io-2.8.0-javadoc.jar +file.reference.commons-io-2.8.0-sources.jar=lib/commons-io-2.8.0-sources.jar +file.reference.commons-io-2.8.0.jar=lib/commons-io-2.8.0.jar +file.reference.commons-math3-3.6.1-javadoc.jar=lib/commons-math3-3.6.1-javadoc.jar +file.reference.commons-math3-3.6.1-sources.jar=lib/commons-math3-3.6.1-sources.jar +file.reference.commons-math3-3.6.1.jar=lib/commons-math3-3.6.1.jar +file.reference.complementNaiveBayes.jar=lib/weka/complementNaiveBayes.jar +file.reference.conjunctiveRule.jar=lib/weka/conjunctiveRule.jar +file.reference.discriminantAnalysis1.0.2.jar=lib/weka/discriminantAnalysis1.0.2.jar +file.reference.dom4j-1.6.1.jar=lib/weka/dom4j-1.6.1.jar +file.reference.DTNB.jar=lib/weka/DTNB.jar +file.reference.ebmc.jar=lib/weka/ebmc.jar +file.reference.elasticNet.jar=lib/weka/elasticNet.jar +file.reference.ensemblesOfNestedDichotomies.jar=lib/weka/ensemblesOfNestedDichotomies.jar +file.reference.extraTrees.jar=lib/weka/extraTrees.jar +file.reference.fastCorrBasedFS.jar=lib/weka/fastCorrBasedFS.jar +file.reference.functionalTrees.jar=lib/weka/functionalTrees.jar +file.reference.fuzzyLaticeReasoning.jar=lib/weka/fuzzyLaticeReasoning.jar +file.reference.fuzzyUnorderedRuleInduction.jar=lib/weka/fuzzyUnorderedRuleInduction.jar +file.reference.geronimo-stax-api_1.0_spec-1.0.jar=lib/weka/geronimo-stax-api_1.0_spec-1.0.jar +file.reference.GPAttributeGeneration.jar=lib/weka/GPAttributeGeneration.jar +file.reference.gridSearch.jar=lib/weka/gridSearch.jar +file.reference.hiddenNaiveBayes.jar=lib/weka/hiddenNaiveBayes.jar +file.reference.HMM.jar=lib/weka/HMM.jar +file.reference.hyperPipes.jar=lib/weka/hyperPipes.jar +file.reference.IBkLG.jar=lib/weka/IBkLG.jar +file.reference.isotonicRegression.jar=lib/weka/isotonicRegression.jar +file.reference.iterativeAbsoluteErrorRegression.jar=lib/weka/iterativeAbsoluteErrorRegression.jar +file.reference.J48Consolidated.jar=lib/weka/J48Consolidated.jar +file.reference.JCDT.jar=lib/weka/JCDT.jar +file.reference.jcommon-1.0.14.jar=lib/weka/jcommon-1.0.14.jar +file.reference.jcommon-1.0.23.jar=lib/jcommon-1.0.23.jar +file.reference.jfreechart-1.0.13.jar=lib/weka/jfreechart-1.0.13.jar +file.reference.jfreechart-1.0.19.jar=lib/jfreechart-1.0.19.jar +file.reference.junit-4.11.jar=lib/junit-4.11.jar +file.reference.kernelLogisticRegression.jar=lib/weka/kernelLogisticRegression.jar +file.reference.lazy-associative-classifier.jar=lib/weka/lazy-associative-classifier.jar +file.reference.lazyBayesianRules.jar=lib/weka/lazyBayesianRules.jar +file.reference.leastMedSquared.jar=lib/weka/leastMedSquared.jar +file.reference.liblinear-java-1.96-SNAPSHOT.jar=lib/weka/liblinear-java-1.96-SNAPSHOT.jar +file.reference.liblinear.jar=lib/weka/liblinear.jar +file.reference.LibSVM-1.0.10-SNAPSHOT.jar=lib/weka/LibSVM-1.0.10-SNAPSHOT.jar +file.reference.libsvm2.jar=lib/weka/libsvm2.jar +file.reference.modlem.jar=lib/weka/modlem.jar +file.reference.multilayerPerceptronCS.jar=lib/weka/multilayerPerceptronCS.jar +file.reference.multiLayerPerceptrons.jar=lib/weka/multiLayerPerceptrons.jar +file.reference.MultiObjectiveEvolutionaryFuzzyClassifier.jar=lib/weka/MultiObjectiveEvolutionaryFuzzyClassifier.jar +file.reference.multisearch-2017.3.28.jar=lib/weka/multisearch-2017.3.28.jar +file.reference.naiveBayesTree.jar=lib/weka/naiveBayesTree.jar +file.reference.NNge.jar=lib/weka/NNge.jar +file.reference.oneClassClassifier.jar=lib/weka/oneClassClassifier.jar +file.reference.ordinalClassClassifier.jar=lib/weka/ordinalClassClassifier.jar +file.reference.ordinalLearningMethod.jar=lib/weka/ordinalLearningMethod.jar +file.reference.ordinalStochasticDominance.jar=lib/weka/ordinalStochasticDominance.jar +file.reference.poi-3.8-20120326.jar=lib/weka/poi-3.8-20120326.jar +file.reference.poi-ooxml-3.8-20120326.jar=lib/weka/poi-ooxml-3.8-20120326.jar +file.reference.poi-ooxml-schemas-3.8-20120326.jar=lib/weka/poi-ooxml-schemas-3.8-20120326.jar +file.reference.RBFNetwork.jar=lib/weka/RBFNetwork.jar +file.reference.ridor.jar=lib/weka/ridor.jar +file.reference.rotationForest.jar=lib/weka/rotationForest.jar +file.reference.rseslib.jar=lib/weka/rseslib.jar +file.reference.simpleCART.jar=lib/weka/simpleCART.jar +file.reference.simpleEducationalLearningSchemes.jar=lib/weka/simpleEducationalLearningSchemes.jar +file.reference.SPegasos.jar=lib/weka/SPegasos.jar +file.reference.timeseriesForecasting1.0.25.jar=lib/weka/timeseriesForecasting1.0.25.jar +file.reference.votingFeatureIntervals.jar=lib/weka/votingFeatureIntervals.jar +file.reference.weka-src.jar=lib/weka/weka-src.jar +file.reference.weka.jar=lib/weka/weka.jar +file.reference.Weka_AnalogicalModeling-0.04.jar=lib/weka/Weka_AnalogicalModeling-0.04.jar +file.reference.WekaExcel.jar=lib/weka/WekaExcel.jar +file.reference.winnow.jar=lib/weka/winnow.jar +file.reference.xmlbeans-2.3.0.jar=lib/weka/xmlbeans-2.3.0.jar +includes=** +jar.compress=false +javac.classpath=\ + ${file.reference.commons-io-2.8.0-javadoc.jar}:\ + ${file.reference.commons-io-2.8.0-sources.jar}:\ + ${file.reference.commons-io-2.8.0.jar}:\ + ${file.reference.commons-math3-3.6.1-javadoc.jar}:\ + ${file.reference.commons-math3-3.6.1-sources.jar}:\ + ${file.reference.commons-math3-3.6.1.jar}:\ + ${file.reference.jcommon-1.0.23.jar}:\ + ${file.reference.jfreechart-1.0.19.jar}:\ + ${file.reference.junit-4.11.jar}:\ + ${file.reference.AnDE.jar}:\ + ${file.reference.CHIRP.jar}:\ + ${file.reference.DTNB.jar}:\ + ${file.reference.GPAttributeGeneration.jar}:\ + ${file.reference.HMM.jar}:\ + ${file.reference.IBkLG.jar}:\ + ${file.reference.J48Consolidated.jar}:\ + ${file.reference.JCDT.jar}:\ + ${file.reference.LibSVM-1.0.10-SNAPSHOT.jar}:\ + ${file.reference.MultiObjectiveEvolutionaryFuzzyClassifier.jar}:\ + ${file.reference.NNge.jar}:\ + ${file.reference.RBFNetwork.jar}:\ + ${file.reference.SPegasos.jar}:\ + ${file.reference.WekaExcel.jar}:\ + ${file.reference.Weka_AnalogicalModeling-0.04.jar}:\ + ${file.reference.alternatingDecisionTrees.jar}:\ + ${file.reference.alternatingModelTrees.jar}:\ + ${file.reference.bestFirstTree.jar}:\ + ${file.reference.classificationViaClustering.jar}:\ + ${file.reference.clojure-1.5.1.jar}:\ + ${file.reference.clojure-utils-0.2.3.jar}:\ + ${file.reference.clojureClassifier.jar}:\ + ${file.reference.commons-codec-1.3.jar}:\ + ${file.reference.complementNaiveBayes.jar}:\ + ${file.reference.conjunctiveRule.jar}:\ + ${file.reference.discriminantAnalysis1.0.2.jar}:\ + ${file.reference.dom4j-1.6.1.jar}:\ + ${file.reference.ebmc.jar}:\ + ${file.reference.elasticNet.jar}:\ + ${file.reference.extraTrees.jar}:\ + ${file.reference.fastCorrBasedFS.jar}:\ + ${file.reference.functionalTrees.jar}:\ + ${file.reference.fuzzyLaticeReasoning.jar}:\ + ${file.reference.fuzzyUnorderedRuleInduction.jar}:\ + ${file.reference.geronimo-stax-api_1.0_spec-1.0.jar}:\ + ${file.reference.gridSearch.jar}:\ + ${file.reference.hiddenNaiveBayes.jar}:\ + ${file.reference.hyperPipes.jar}:\ + ${file.reference.isotonicRegression.jar}:\ + ${file.reference.iterativeAbsoluteErrorRegression.jar}:\ + ${file.reference.jcommon-1.0.14.jar}:\ + ${file.reference.jfreechart-1.0.13.jar}:\ + ${file.reference.kernelLogisticRegression.jar}:\ + ${file.reference.lazy-associative-classifier.jar}:\ + ${file.reference.lazyBayesianRules.jar}:\ + ${file.reference.leastMedSquared.jar}:\ + ${file.reference.liblinear-java-1.96-SNAPSHOT.jar}:\ + ${file.reference.liblinear.jar}:\ + ${file.reference.libsvm2.jar}:\ + ${file.reference.modlem.jar}:\ + ${file.reference.multiLayerPerceptrons.jar}:\ + ${file.reference.multilayerPerceptronCS.jar}:\ + ${file.reference.multisearch-2017.3.28.jar}:\ + ${file.reference.naiveBayesTree.jar}:\ + ${file.reference.oneClassClassifier.jar}:\ + ${file.reference.ordinalClassClassifier.jar}:\ + ${file.reference.ordinalLearningMethod.jar}:\ + ${file.reference.ordinalStochasticDominance.jar}:\ + ${file.reference.poi-3.8-20120326.jar}:\ + ${file.reference.poi-ooxml-3.8-20120326.jar}:\ + ${file.reference.poi-ooxml-schemas-3.8-20120326.jar}:\ + ${file.reference.ridor.jar}:\ + ${file.reference.rotationForest.jar}:\ + ${file.reference.rseslib.jar}:\ + ${file.reference.simpleCART.jar}:\ + ${file.reference.simpleEducationalLearningSchemes.jar}:\ + ${file.reference.timeseriesForecasting1.0.25.jar}:\ + ${file.reference.votingFeatureIntervals.jar}:\ + ${file.reference.weka-src.jar}:\ + ${file.reference.weka.jar}:\ + ${file.reference.winnow.jar}:\ + ${file.reference.xmlbeans-2.3.0.jar}:\ + ${file.reference.ensemblesOfNestedDichotomies.jar} +# Space-separated list of extra javac options +javac.compilerargs= +javac.deprecation=false +javac.external.vm=true +javac.modulepath= +javac.processormodulepath= +javac.processorpath=\ + ${javac.classpath} +javac.source=1.8 +javac.target=1.8 +javac.test.classpath=\ + ${javac.classpath}:\ + ${build.classes.dir} +javac.test.modulepath=\ + ${javac.modulepath} +javac.test.processorpath=\ + ${javac.test.classpath} +javadoc.additionalparam= +javadoc.author=false +javadoc.encoding=${source.encoding} +javadoc.html5=false +javadoc.noindex=false +javadoc.nonavbar=false +javadoc.notree=false +javadoc.private=false +javadoc.splitindex=true +javadoc.use=true +javadoc.version=false +javadoc.windowtitle= +# The jlink additional root modules to resolve +jlink.additionalmodules= +# The jlink additional command line parameters +jlink.additionalparam= +jlink.launcher=true +jlink.launcher.name=biodiscml +main.class=biodiscml.Main +manifest.file=manifest.mf +meta.inf.dir=${src.dir}/META-INF +mkdist.disabled=false +platform.active=default_platform +run.classpath=\ + ${javac.classpath}:\ + ${build.classes.dir} +# Space-separated list of JVM arguments used when running the project. +# You may also define separate properties like run-sys-prop.name=value instead of -Dname=value. +# To set system properties for unit tests define test-sys-prop.name=value: +run.jvmargs= +run.modulepath=\ + ${javac.modulepath} +run.test.classpath=\ + ${javac.test.classpath}:\ + ${build.test.classes.dir} +run.test.modulepath=\ + ${javac.test.modulepath} +source.encoding=UTF-8 +source.reference.weka.jar=lib/weka/weka-src.jar!/src/main/java/ +src.dir=src +test.src.dir=test