--- a
+++ b/doc/source/api/metrics.rst
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+torchdrug.metrics
+=================
+
+.. currentmodule:: torchdrug.metrics
+
+Basic Metrics
+-------------
+
+AUROC
+^^^^^
+.. autofunction:: area_under_roc
+.. function:: AUROC
+
+    alias of ``torchdrug.metrics.area_under_roc``
+
+
+AUPRC
+^^^^^
+.. autofunction:: area_under_prc
+.. function:: AUPRC
+
+    alias of ``torchdrug.metrics.area_under_prc``
+
+R2
+^^
+.. autofunction:: r2
+
+Accuracy
+^^^^^^^^
+.. autofunction:: accuracy
+
+Matthews Correlation Coefficient
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+.. autofunction:: matthews_corrcoef
+
+Pearson Correlation Coefficient
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+.. autofunction:: pearsonr
+
+Spearman's Rank Correlation Coefficient
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+.. autofunction:: spearmanr
+
+Variadic Accuracy
+^^^^^^^^^^^^^^^^^
+.. autofunction:: variadic_accuracy
+
+Variadic Area Under ROC
+^^^^^^^^^^^^^^^^^^^^^^^
+.. autofunction:: variadic_area_under_roc
+
+Variadic Area Under PRC
+^^^^^^^^^^^^^^^^^^^^^^^
+.. autofunction:: variadic_area_under_prc
+
+Variadic Top Precision
+^^^^^^^^^^^^^^^^^^^^^^
+.. autofunction:: variadic_top_precision
+
+F1 Max
+^^^^^^
+.. autofunction:: f1_max
+
+
+Chemical Metrics
+----------------
+
+SA
+^^
+.. autofunction:: SA
+
+QED
+^^^
+.. autofunction:: QED
+
+Chemical Validity
+^^^^^^^^^^^^^^^^^
+.. autofunction:: chemical_validity
+
+LogP
+^^^^
+.. autofunction:: logP
+
+Penalized LogP
+^^^^^^^^^^^^^^
+.. autofunction:: penalized_logP