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bionemo-framework

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Commit [b9e282]

Initial commit

Authored by: Amanda-D 2025-04-19

Browse code at this revision

Parent: [0b892d]

Child: [be1279]

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added	docs/docs/models/ESM-2/index.md
added	docs/docs/models/ESM-2/pre-training.md
added	docs/docs/models/amplify.md
added	docs/docs/models/evo2.md
added	docs/docs/models/geneformer.md
added	docs/docs/models/index.md
added	docs/docs/user-guide/SUMMARY.md
added	docs/docs/user-guide/appendix/FAQ.md
added	docs/docs/user-guide/appendix/releasenotes-fw.md
added	docs/docs/user-guide/background/SUMMARY.md
added	docs/docs/user-guide/background/megatron_datasets.md
added	docs/docs/user-guide/background/nemo2.md
added	docs/docs/user-guide/contributing/Writing Documentation/index.md
added	docs/docs/user-guide/contributing/Writing Documentation/jupyter-notebooks.ipynb
added	docs/docs/user-guide/contributing/Writing Documentation/mkdocs.md
added	docs/docs/user-guide/contributing/code-review.md
added	docs/docs/user-guide/contributing/contributing.md
added	docs/docs/user-guide/contributing/sub-package_dependency_graph.md
added	docs/docs/user-guide/examples/bionemo-esm2/finetune.ipynb
added	docs/docs/user-guide/examples/bionemo-esm2/inference.ipynb
added	docs/docs/user-guide/examples/bionemo-esm2/mutant-design.ipynb
added	docs/docs/user-guide/examples/bionemo-esm2/pretrain.md
added	docs/docs/user-guide/examples/bionemo-geneformer/.gitignore
added	docs/docs/user-guide/examples/bionemo-geneformer/geneformer-celltype-classification.ipynb
added	docs/docs/user-guide/examples/bionemo-geneformer/geneformer_cellxgene_tutorial.ipynb

docs/docs/models/ESM-2/index.md Diff Switch to side-by-side view

docs/docs/models/ESM-2/pre-training.md Diff Switch to side-by-side view

docs/docs/models/amplify.md Diff Switch to side-by-side view

docs/docs/models/evo2.md Diff Switch to side-by-side view

docs/docs/models/geneformer.md Diff Switch to side-by-side view

docs/docs/models/index.md Diff Switch to side-by-side view

docs/docs/user-guide/SUMMARY.md Diff Switch to side-by-side view

docs/docs/user-guide/appendix/FAQ.md Diff Switch to side-by-side view

docs/docs/user-guide/appendix/releasenotes-fw.md Diff Switch to side-by-side view

docs/docs/user-guide/background/SUMMARY.md Diff Switch to side-by-side view

docs/docs/user-guide/background/megatron_datasets.md Diff Switch to side-by-side view

docs/docs/user-guide/background/nemo2.md Diff Switch to side-by-side view

docs/docs/user-guide/contributing/Writing Documentation/index.md Diff Switch to side-by-side view

docs/docs/user-guide/contributing/Writing Documentation/jupyter-notebooks.ipynb Diff Switch to side-by-side view

docs/docs/user-guide/contributing/Writing Documentation/mkdocs.md Diff Switch to side-by-side view

docs/docs/user-guide/contributing/code-review.md Diff Switch to side-by-side view

docs/docs/user-guide/contributing/contributing.md Diff Switch to side-by-side view

docs/docs/user-guide/contributing/sub-package_dependency_graph.md Diff Switch to side-by-side view

docs/docs/user-guide/examples/bionemo-esm2/finetune.ipynb Diff Switch to side-by-side view

docs/docs/user-guide/examples/bionemo-esm2/inference.ipynb Diff Switch to side-by-side view

docs/docs/user-guide/examples/bionemo-esm2/mutant-design.ipynb Diff Switch to side-by-side view

docs/docs/user-guide/examples/bionemo-esm2/pretrain.md Diff Switch to side-by-side view

docs/docs/user-guide/examples/bionemo-geneformer/.gitignore Diff Switch to side-by-side view

docs/docs/user-guide/examples/bionemo-geneformer/geneformer-celltype-classification.ipynb Diff Switch to side-by-side view

docs/docs/user-guide/examples/bionemo-geneformer/geneformer_cellxgene_tutorial.ipynb Diff Switch to side-by-side view

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