bionemo-framework / Git / Commit [b9e282]

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bionemo-framework

Downloads: 1

Commit [b9e282]

Initial commit

Authored by: Amanda-D 2025-04-19

Browse code at this revision

Parent: [0b892d]

Child: [be1279]

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added	sub-packages/bionemo-geneformer/src/bionemo/geneformer/data/singlecell/dataset.py
added	sub-packages/bionemo-geneformer/src/bionemo/geneformer/data/singlecell/preprocess.py
added	sub-packages/bionemo-geneformer/src/bionemo/geneformer/data/singlecell/utils.py
added	sub-packages/bionemo-geneformer/src/bionemo/geneformer/model/__init__.py
added	sub-packages/bionemo-geneformer/src/bionemo/geneformer/model/finetune_token_regressor.py
added	sub-packages/bionemo-geneformer/src/bionemo/geneformer/run/__init__.py
added	sub-packages/bionemo-geneformer/src/bionemo/geneformer/run/config_models.py
added	sub-packages/bionemo-geneformer/src/bionemo/geneformer/run/main.py
added	sub-packages/bionemo-geneformer/src/bionemo/geneformer/run/recipes.py
added	sub-packages/bionemo-geneformer/src/bionemo/geneformer/scripts/README.md
added	sub-packages/bionemo-geneformer/src/bionemo/geneformer/scripts/__init__.py
added	sub-packages/bionemo-geneformer/src/bionemo/geneformer/scripts/infer_geneformer.py
added	sub-packages/bionemo-geneformer/src/bionemo/geneformer/scripts/train_geneformer.py
added	sub-packages/bionemo-geneformer/src/bionemo/geneformer/tokenizer/__init__.py
added	sub-packages/bionemo-geneformer/src/bionemo/geneformer/tokenizer/gene_tokenizer.py
added	sub-packages/bionemo-geneformer/tests/bionemo/geneformer/__init__.py
added	sub-packages/bionemo-geneformer/tests/bionemo/geneformer/conftest.py
added	sub-packages/bionemo-geneformer/tests/bionemo/geneformer/scripts/__init__.py
added	sub-packages/bionemo-geneformer/tests/bionemo/geneformer/scripts/test_pydantic_train.py
added	sub-packages/bionemo-geneformer/tests/bionemo/geneformer/scripts/test_train_geneformer.py
added	sub-packages/bionemo-geneformer/tests/bionemo/geneformer/test_dataset.py
added	sub-packages/bionemo-geneformer/tests/bionemo/geneformer/test_model.py
added	sub-packages/bionemo-geneformer/tests/bionemo/geneformer/test_stop_and_go.py
added	sub-packages/bionemo-geneformer/tests/bionemo/geneformer/test_transformer_specs.py
added	sub-packages/bionemo-geometric/LICENSE

sub-packages/bionemo-geneformer/src/bionemo/geneformer/data/singlecell/dataset.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/src/bionemo/geneformer/data/singlecell/preprocess.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/src/bionemo/geneformer/data/singlecell/utils.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/src/bionemo/geneformer/model/init.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/src/bionemo/geneformer/model/finetune_token_regressor.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/src/bionemo/geneformer/run/init.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/src/bionemo/geneformer/run/config_models.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/src/bionemo/geneformer/run/main.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/src/bionemo/geneformer/run/recipes.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/src/bionemo/geneformer/scripts/README.md Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/src/bionemo/geneformer/scripts/init.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/src/bionemo/geneformer/scripts/infer_geneformer.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/src/bionemo/geneformer/scripts/train_geneformer.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/src/bionemo/geneformer/tokenizer/init.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/src/bionemo/geneformer/tokenizer/gene_tokenizer.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/tests/bionemo/geneformer/init.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/tests/bionemo/geneformer/conftest.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/tests/bionemo/geneformer/scripts/init.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/tests/bionemo/geneformer/scripts/test_pydantic_train.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/tests/bionemo/geneformer/scripts/test_train_geneformer.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/tests/bionemo/geneformer/test_dataset.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/tests/bionemo/geneformer/test_model.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/tests/bionemo/geneformer/test_stop_and_go.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/tests/bionemo/geneformer/test_transformer_specs.py Diff Switch to side-by-side view

sub-packages/bionemo-geometric/LICENSE Diff Switch to side-by-side view

<< < 1 .. 15 16 17 18 19 .. 27 > >> (Page 17 of 27)