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bionemo-framework

Downloads: 1

Commit [b9e282]

Initial commit

Authored by: Amanda-D 2025-04-19

Browse code at this revision

Parent: [0b892d]

Child: [be1279]

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added	sub-packages/bionemo-example_model/src/bionemo/example_model/training_scripts/finetune_mnist.py
added	sub-packages/bionemo-example_model/src/bionemo/example_model/training_scripts/predict_mnist.py
added	sub-packages/bionemo-example_model/src/bionemo/example_model/training_scripts/pretrain_mnist.py
added	sub-packages/bionemo-example_model/tests/bionemo/example_model/lightning/test_lightning_basic.py
added	sub-packages/bionemo-fw/LICENSE
added	sub-packages/bionemo-fw/README.md
added	sub-packages/bionemo-fw/VERSION
added	sub-packages/bionemo-fw/pyproject.toml
added	sub-packages/bionemo-fw/src/bionemo/fw/__init__.py
added	sub-packages/bionemo-fw/src/bionemo/fw/dependency_graph.py
added	sub-packages/bionemo-fw/tests/__init__.py
added	sub-packages/bionemo-fw/tests/bionemo/fw/test_dependency_graph.py
added	sub-packages/bionemo-fw/tests/bionemo/fw/test_sub_package_imports.py
added	sub-packages/bionemo-geneformer/LICENSE
added	sub-packages/bionemo-geneformer/README.md
added	sub-packages/bionemo-geneformer/VERSION
added	sub-packages/bionemo-geneformer/pyproject.toml
added	sub-packages/bionemo-geneformer/scripts/README.md
added	sub-packages/bionemo-geneformer/scripts/geneformer_mlm_loss_eval.py
added	sub-packages/bionemo-geneformer/src/bionemo/geneformer/__init__.py
added	sub-packages/bionemo-geneformer/src/bionemo/geneformer/api.py
added	sub-packages/bionemo-geneformer/src/bionemo/geneformer/data/__init__.py
added	sub-packages/bionemo-geneformer/src/bionemo/geneformer/data/preprocess.py
added	sub-packages/bionemo-geneformer/src/bionemo/geneformer/data/singlecell/__init__.py
added	sub-packages/bionemo-geneformer/src/bionemo/geneformer/data/singlecell/datamodule.py

sub-packages/bionemo-example_model/src/bionemo/example_model/training_scripts/finetune_mnist.py Diff Switch to side-by-side view

sub-packages/bionemo-example_model/src/bionemo/example_model/training_scripts/predict_mnist.py Diff Switch to side-by-side view

sub-packages/bionemo-example_model/src/bionemo/example_model/training_scripts/pretrain_mnist.py Diff Switch to side-by-side view

sub-packages/bionemo-example_model/tests/bionemo/example_model/lightning/test_lightning_basic.py Diff Switch to side-by-side view

sub-packages/bionemo-fw/LICENSE Diff Switch to side-by-side view

sub-packages/bionemo-fw/README.md Diff Switch to side-by-side view

sub-packages/bionemo-fw/VERSION Diff Switch to side-by-side view

sub-packages/bionemo-fw/pyproject.toml Diff Switch to side-by-side view

sub-packages/bionemo-fw/src/bionemo/fw/init.py Diff Switch to side-by-side view

sub-packages/bionemo-fw/src/bionemo/fw/dependency_graph.py Diff Switch to side-by-side view

sub-packages/bionemo-fw/tests/init.py Diff Switch to side-by-side view

sub-packages/bionemo-fw/tests/bionemo/fw/test_dependency_graph.py Diff Switch to side-by-side view

sub-packages/bionemo-fw/tests/bionemo/fw/test_sub_package_imports.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/LICENSE Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/README.md Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/VERSION Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/pyproject.toml Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/scripts/README.md Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/scripts/geneformer_mlm_loss_eval.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/src/bionemo/geneformer/init.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/src/bionemo/geneformer/api.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/src/bionemo/geneformer/data/init.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/src/bionemo/geneformer/data/preprocess.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/src/bionemo/geneformer/data/singlecell/init.py Diff Switch to side-by-side view

sub-packages/bionemo-geneformer/src/bionemo/geneformer/data/singlecell/datamodule.py Diff Switch to side-by-side view

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