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bionemo-framework

Downloads: 1

Commit [b9e282]

Initial commit

Authored by: Amanda-D 2025-04-19

Browse code at this revision

Parent: [0b892d]

Child: [be1279]

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added	sub-packages/bionemo-evo2/src/bionemo/evo2/run/train.py
added	sub-packages/bionemo-evo2/src/bionemo/evo2/utils/__init__.py
added	sub-packages/bionemo-evo2/src/bionemo/evo2/utils/checkpoint/README.md
added	sub-packages/bionemo-evo2/src/bionemo/evo2/utils/checkpoint/__init__.py
added	sub-packages/bionemo-evo2/src/bionemo/evo2/utils/checkpoint/convert_checkpoint_model_parallel_evo2.py
added	sub-packages/bionemo-evo2/src/bionemo/evo2/utils/checkpoint/convert_to_nemo.py
added	sub-packages/bionemo-evo2/src/bionemo/evo2/utils/checkpoint/convert_zero3_to_zero1.py
added	sub-packages/bionemo-evo2/src/bionemo/evo2/utils/checkpoint/params.py
added	sub-packages/bionemo-evo2/src/bionemo/evo2/utils/checkpoint/zero3_conversion_lib.py
added	sub-packages/bionemo-evo2/src/bionemo/evo2/utils/config.py
added	sub-packages/bionemo-evo2/tests/bionemo/evo2/data/test_fasta_dataset.py
added	sub-packages/bionemo-evo2/tests/bionemo/evo2/data/test_preprocess.py
added	sub-packages/bionemo-evo2/tests/bionemo/evo2/data/test_tokenizer.py
added	sub-packages/bionemo-evo2/tests/bionemo/evo2/run/test_infer.py
added	sub-packages/bionemo-evo2/tests/bionemo/evo2/run/test_inference.py
added	sub-packages/bionemo-evo2/tests/bionemo/evo2/run/test_predict.py
added	sub-packages/bionemo-evo2/tests/bionemo/evo2/run/test_train.py
added	sub-packages/bionemo-evo2/tests/bionemo/evo2/test_evo2.py
added	sub-packages/bionemo-evo2/tests/bionemo/evo2/test_hyena_operators.py
added	sub-packages/bionemo-example_model/LICENSE
added	sub-packages/bionemo-example_model/README.md
added	sub-packages/bionemo-example_model/VERSION
added	sub-packages/bionemo-example_model/pyproject.toml
added	sub-packages/bionemo-example_model/src/bionemo/example_model/lightning/__init__.py
added	sub-packages/bionemo-example_model/src/bionemo/example_model/lightning/lightning_basic.py

sub-packages/bionemo-evo2/src/bionemo/evo2/run/train.py Diff Switch to side-by-side view

sub-packages/bionemo-evo2/src/bionemo/evo2/utils/init.py Diff Switch to side-by-side view

sub-packages/bionemo-evo2/src/bionemo/evo2/utils/checkpoint/README.md Diff Switch to side-by-side view

sub-packages/bionemo-evo2/src/bionemo/evo2/utils/checkpoint/init.py Diff Switch to side-by-side view

sub-packages/bionemo-evo2/src/bionemo/evo2/utils/checkpoint/convert_checkpoint_model_parallel_evo2.py Diff Switch to side-by-side view

sub-packages/bionemo-evo2/src/bionemo/evo2/utils/checkpoint/convert_to_nemo.py Diff Switch to side-by-side view

sub-packages/bionemo-evo2/src/bionemo/evo2/utils/checkpoint/convert_zero3_to_zero1.py Diff Switch to side-by-side view

sub-packages/bionemo-evo2/src/bionemo/evo2/utils/checkpoint/params.py Diff Switch to side-by-side view

sub-packages/bionemo-evo2/src/bionemo/evo2/utils/checkpoint/zero3_conversion_lib.py Diff Switch to side-by-side view

sub-packages/bionemo-evo2/src/bionemo/evo2/utils/config.py Diff Switch to side-by-side view

sub-packages/bionemo-evo2/tests/bionemo/evo2/data/test_fasta_dataset.py Diff Switch to side-by-side view

sub-packages/bionemo-evo2/tests/bionemo/evo2/data/test_preprocess.py Diff Switch to side-by-side view

sub-packages/bionemo-evo2/tests/bionemo/evo2/data/test_tokenizer.py Diff Switch to side-by-side view

sub-packages/bionemo-evo2/tests/bionemo/evo2/run/test_infer.py Diff Switch to side-by-side view

sub-packages/bionemo-evo2/tests/bionemo/evo2/run/test_inference.py Diff Switch to side-by-side view

sub-packages/bionemo-evo2/tests/bionemo/evo2/run/test_predict.py Diff Switch to side-by-side view

sub-packages/bionemo-evo2/tests/bionemo/evo2/run/test_train.py Diff Switch to side-by-side view

sub-packages/bionemo-evo2/tests/bionemo/evo2/test_evo2.py Diff Switch to side-by-side view

sub-packages/bionemo-evo2/tests/bionemo/evo2/test_hyena_operators.py Diff Switch to side-by-side view

sub-packages/bionemo-example_model/LICENSE Diff Switch to side-by-side view

sub-packages/bionemo-example_model/README.md Diff Switch to side-by-side view

sub-packages/bionemo-example_model/VERSION Diff Switch to side-by-side view

sub-packages/bionemo-example_model/pyproject.toml Diff Switch to side-by-side view

sub-packages/bionemo-example_model/src/bionemo/example_model/lightning/init.py Diff Switch to side-by-side view

sub-packages/bionemo-example_model/src/bionemo/example_model/lightning/lightning_basic.py Diff Switch to side-by-side view

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