[build-system]

requires = ["setuptools>=64", "wheel"]

build-backend = "setuptools.build_meta"

[project]

name = "bionemo-moco"

readme = "README.md"

description = "BioNeMo Modular Co-Design: Making building Diffusion and Flow Matching generative models easier"

authors = [{ name = "BioNeMo Team", email = "bionemofeedback@nvidia.com" }]

requires-python = ">=3.10"

license = { file = "LICENSE" }

dynamic = ["version"]

dependencies = [

    # bionemo sub-packages

    # external

    'torch>=2.2',

    'numpy>=1.24.4,<2',    #needed for notebooks

    'jaxtyping>=0.2.34',

    'pot>=0.9.5',          #needed for optimal transport

    'scikit-learn>=1.6.0', #needed for notebooks

    'matplotlib>=3.3.2'    #needed for notebooks

]

[tool.setuptools.packages.find]

where = ["src"]

include = ["bionemo.*"]

namespaces = true

exclude = ["test*."]

[tool.setuptools.dynamic]

version = { file = "VERSION" }

[tool.uv]

cache-keys = [{ git = true }]