--- a
+++ b/sub-packages/bionemo-moco/environment/setup.sh
@@ -0,0 +1,39 @@
+#!/bin/bash
+
+# Set the path to your Conda environment YAML file
+ENV_YAML="environment/moco_env.yaml"
+
+# Extract the environment name from the YAML file
+ENV_NAME=$(head -n 1 "$ENV_YAML" | cut -d':' -f2- | tr -d ' ')
+
+# Load Conda to enable command
+source "$(conda info --base)/etc/profile.d/conda.sh"
+
+# Create the Conda environment from the YAML file
+echo "Creating Conda environment $ENV_NAME from $ENV_YAML..."
+conda env create -f "$ENV_YAML"
+
+# Activate the Conda environment
+echo "Activating Conda environment $ENV_NAME..."
+conda activate "$ENV_NAME"
+
+# Check if the environment was successfully activated
+if [ "$CONDA_DEFAULT_ENV" == "$ENV_NAME" ]; then
+    echo "Conda environment $ENV_NAME activated successfully."
+    # Navigate to your project directory if needed
+    # cd /path/to/your/project  # Uncomment and adjust this path as necessary
+    # Install your project in editable mode using pip
+    pip install pydoc-markdown>=4.8.2
+    pip install pytest-cov==4.1.0 pytest-timeout==2.2.0 pytest-dependency==0.5.1
+    pre-commit install
+    echo "Installing bionemo-moco in editable mode using pip..."
+    pip install -e .
+    echo "Setup complete."
+    # Run tests
+    echo "Running tests..."
+    pytest
+    echo "Tests complete. You can now work within the $ENV_NAME environment."
+else
+    echo "Failed to activate Conda environment $ENV_NAME. Exiting..."
+    exit 1
+fi