--- a +++ b/sub-packages/bionemo-moco/environment/Instructions.md @@ -0,0 +1,31 @@ +Environment Setup +=============== + +From the bionemo-moco directory run: + +```bash +bash environment/setup.sh +``` + +This creates the conda environment, installs bionemo-moco and runs the tests. + +Local Code Setup +=============== +From the bionemo-moco directory run: + +```bash +bash environment/clone_bionemo_moco.sh +``` + +This creates clones only the bionemo subpackage. To install in your local env use: + +```bash +pip install -e . +``` + +inside the bionemo-moco directory. + +```bash +pip install --no-deps -e . +``` +can be used if want to install bionemo-moco over your current torch version. The remaining required jaxtyping and pot dependencies can be manually installed via pip.