site_name: BioNeMo Framework
site_url: https://nvidia.github.io/bionemo-framework
repo_url: https://github.com/NVIDIA/bionemo-framework
repo_name: NVIDIA/bionemo-framework

theme:
  name: "material"
  custom_dir: overrides
  features:
    - content.code.annotate
    - navigation.tabs
    - navigation.indexes
    - navigation.instant
    - navigation.path
    - navigation.instant.prefetch
    - navigation.top
    - navigation.footer
    - search.suggest
    - search.highlight
    - content.code.copy
  font:
    code: Roboto Mono
  favicon: assets/images/favicon.png
  language: en
  palette:
    - media: "(prefers-color-scheme: light)"
      scheme: light
      primary: custom
      accent: lime
      toggle:
        icon: material/weather-night
        name: Switch to dark mode
    - media: "(prefers-color-scheme: dark)"
      scheme: dark
      primary: custom
      accent: lime
      toggle:
        icon: material/weather-sunny
        name: Switch to light mode
  icon:
    logo: nvidia/nvidia-logo
    repo: fontawesome/brands/github

extra_css:
  - assets/css/color-schemes.css
  - assets/css/fonts.css
  - assets/css/custom-material.css
  - assets/css/jupyter-themes.css

plugins:
  - search
  - gen-files:
      scripts:
        - scripts/gen_ref_pages.py
  - macros
  - mike:
      # These fields are all optional; the defaults are as below...
      alias_type: copy
      redirect_template: null
      deploy_prefix: ""
      canonical_version: "latest"
      version_selector: true
      css_dir: "assets/css"
      javascript_dir: "assets/js"
  - mkdocstrings:
      handlers:
        python:
          paths:
            - ../sub-packages/*/src
  - mkdocs-jupyter:
      theme: auto
      highlight_extra_classes: "jupyter-notebook"
      remove_tag_config:
        remove_input_tags:
            - hide-code
            - hide_code
            - hide-input
            - hide_input
            - remove_input
            - remove-input
        remove_cell_tags:
            - hide-cell
            - hide_cell
            - remove-cell
            - remove_cell
        remove_all_outputs_tags:
            - hide-output
            - hide_output
            - remove-output
            - remove_output
  - include_dir_to_nav:
      file_pattern: '.*\.(md|ipynb)$'
  - literate-nav:
      nav_file: SUMMARY.md
  - site-urls

markdown_extensions:
  - attr_list
  - md_in_html
  - pymdownx.details
  - pymdownx.superfences
  - pymdownx.snippets:
      check_paths: true
      restrict_base_path: False
      base_path: "."
  - pymdownx.emoji:
      emoji_index: !!python/name:material.extensions.emoji.twemoji
      emoji_generator: !!python/name:material.extensions.emoji.to_svg
      options:
        custom_icons:
          - overrides/.icons
  - pymdownx.tabbed:
      alternate_style: true
  - def_list
  - admonition
  - footnotes

extra:
  social:
    - icon: fontawesome/brands/github
      link: https://github.com/NVIDIA/bionemo-framework
  version:
    provider: mike
    default: latest
    alias: true
  docker_url: nvcr.io/nvidia/clara/bionemo-framework
  docker_tag: nightly
  github_url: https://github.com/NVIDIA/bionemo-framework

copyright: |
  © Copyright 2023-2024 NVIDIA CORPORATION & AFFILIATES. All rights reserved.