--- a +++ b/environment.yml @@ -0,0 +1,137 @@ +name: DeepPurpose +channels: + - rdkit + - pytorch + - rmg + - conda-forge + - defaults +dependencies: + - attrs=19.3.0 + - backcall=0.1.0 + - blas=1.0 + - bleach=3.1.0 + - botorch=0.2.2 + - bzip2=1.0.8 + - ca-certificates=2020.1.1 + - cairo=1.14.12 + - certifi=2019.11.28 + - cffi=1.14.0 + - cycler=0.10.0 + - decorator=4.4.2 + - defusedxml=0.6.0 + - descriptastorus=2.2.0 + - entrypoints=0.3 + - fontconfig=2.13.0 + - freetype=2.9.1 + - gettext=0.19.8.1 + - gpytorch=1.1.1 + - icu=58.2 + - importlib-metadata=1.5.0 + - intel-openmp=2019.4 + - ipykernel=5.1.4 + - ipython=7.13.0 + - ipython_genutils=0.2.0 + - jedi=0.16.0 + - jinja2=2.11.1 + - joblib=0.14.1 + - jpeg=9b + - jsonschema=3.2.0 + - jupyter_client=6.1.2 + - jupyter_core=4.6.3 + - kiwisolver=1.1.0 + - libblas=3.8.0 + - libboost=1.67.0 + - libcblas=3.8.0 + - libffi=3.2.1 + - libiconv=1.15 + - liblapack=3.8.0 + - libpng=1.6.37 + - libsodium=1.0.16 + - libtiff=4.1.0 + - libxml2=2.9.9 + - llvm-openmp=9.0.1 + - lz4=3.0.2 + - lz4-c=1.8.3 + - markupsafe=1.1.1 + - matplotlib=3.1.3 + - matplotlib-base=3.1.3 + - mistune=0.8.4 + - mkl=2019.4 + - mkl-service=2.3.0 + - mkl_fft=1.0.15 + - mkl_random=1.1.0 + - nbconvert=5.6.1 + - nbformat=5.0.4 + - ninja=1.9.0 + - notebook=6.0.3 + - numpy=1.18.1 + - numpy-base=1.18.1 + - olefile=0.46 + - openssl=1.1.1f + - pandas=1.0.3 + - pandoc=2.2.3.2=0 + - pandocfilters=1.4.2 + - parso=0.6.2 + - pcre=8.43 + - pexpect=4.8.0 + - pickleshare=0.7.5 + - pillow=7.0.0 + - pip=20.0.2 + - pixman=0.38.0 + - prometheus_client=0.7.1 + - prompt-toolkit=3.0.4 + - ptyprocess=0.6.0 + - py-boost=1.67.0 + - pycparser=2.20 + - pygments=2.6.1 + - pyparsing=2.4.6 + - pyrsistent=0.16.0 + - python=3.7.7 + - python-dateutil=2.8.1 + - python_abi=3.7 + - pytorch=1.4.0 + - pytz=2019.3 + - pyzmq=18.1.1 + - scikit-learn=0.22.1 + - scikit-plot=0.3.7 + - scipy=1.4.1 + - seaborn=0.11.0 + - send2trash=1.5.0 + - setuptools=46.1.3 + - six=1.14.0=py_1 + - sqlite=3.31.1 + - tensorboard=2.1.0 + - terminado=0.8.3 + - testpath=0.4.4 + - tk=8.6.8 + - torchvision=0.5.0 + - tornado=6.0.4 + - tqdm=4.44.1 + - traitlets=4.3.3 + - wcwidth=0.1.9 + - webencodings=0.5.1 + - wheel=0.34.2 + - xz=5.2.4 + - zeromq=4.3.1 + - zipp=2.2.0 + - zlib=1.2.11 + - zstd=1.3.7 + - pip: + - alabaster==0.7.12 + - autograd==1.3 + - autograd-gamma==0.4.2 + - ax-platform==0.1.11 + - babel==2.8.0 + - chardet==3.0.4 + - docutils==0.16 + - future==0.18.2 + - idna==2.9 + - imagesize==1.2.0 + - lifelines==0.24.3 + - packaging==20.3 + - prettytable==0.7.2 + - requests==2.23.0 + - snowballstemmer==2.0.0 + - subword-nmt==0.3.7 + - urllib3==1.25.8 + - wget==3.2