Classifier

class DeepPurpose.models.Classifier(nn.Sequential)

Classifier (Source) is to make the prediction for DBTA, it serve as a basic component of class DBTA.

constructor create an instance of Classifier.

__init__(self, model_drug, model_protein, **config)

• model_drug (DeepPurpose.models.XX) - Encoder model for drug. XX can be "transformer", "MPNN", "CNN", "CNN_RNN" ...,
• model_protein (DeepPurpose.models.XX) - Encoder model for protein. XX can be "transformer", "CNN", "CNN_RNN" ...,
• config (kwargs, keyword arguments) - specify the parameter of classifier.

Calling functions implement the feedforward procedure of Classifier.

forward(self, v_D, v_P)

• v_D (many types) - input feature for drug encoder model, like "DeepPurpose.models.transformer", "DeepPurpose.models.CNN", "DeepPurpose.models.CNN_RNN", "DeepPurpose.models.MPNN".
• v_P (many types) - input feature for protein encoder model, like "DeepPurpose.models.transformer", "DeepPurpose.models.CNN", "DeepPurpose.models.CNN_RNN".