9 lines (9 with data), 3.5 kB
ÄēŌ
Ćdocutils.nodesĒĆdocumentĒďĒ)ĀĒ}Ē(Ć rawsourceĒĆ ĒĆchildrenĒ]Ēh ĆsectionĒďĒ)ĀĒ}Ē(hhh]Ē(h ĆtitleĒďĒ)ĀĒ}Ē(hĆDeepPurpose.datasetĒh]Ēh ĆTextĒďĒĆDeepPurpose.datasetĒÖĒĀĒ}Ē(hhĆparentĒhhhĆsourceĒNĆlineĒNubaĆ
attributesĒ}Ē(ĆidsĒ]ĒĆclassesĒ]ĒĆnamesĒ]ĒĆdupnamesĒ]ĒĆbackrefsĒ]ĒuĆtagnameĒhhhhhhĆO/Users/futianfan/Downloads/spring2020/DeepPurpose/docs/source/notes/dataset.rstĒhKubh Ć paragraphĒďĒ)ĀĒ}Ē(hĆ?We have downloaded most of the small dataset in the repository.Ēh]ĒhĆ?We have downloaded most of the small dataset in the repository.ĒÖĒĀĒ}Ē(hh/hh-hhhNhNubah}Ē(h]Ēh!]Ēh#]Ēh%]Ēh']Ēuh)h+hh*hKhhhhubh ĆcompoundĒďĒ)ĀĒ}Ē(hhh]ĒĆsphinx.addnodesĒĆtoctreeĒďĒ)ĀĒ}Ē(hhh]Ēh}Ē(h]Ēh!]Ēh#]Ēh%]Ēh']ĒhĆ
notes/datasetĒĆentriesĒ]Ē(NĆ.notes/data/read_file_training_dataset_bioassayĒÜĒNĆ7notes/data/read_file_training_dataset_drug_target_pairsĒÜĒNĆ8notes/data/read_file_virtual_screening_drug_target_pairsĒÜĒNĆ(notes/data/read_file_repurposing_libraryĒÜĒNĆ$notes/data/read_file_target_sequenceĒÜĒNĆnotes/data/download_BindingDBĒÜĒNĆnotes/data/process_BindingDBĒÜĒNĆnotes/data/load_process_DAVISĒÜĒNĆnotes/data/load_process_KIBAĒÜĒNĆ notes/data/load_AID1706_txt_fileĒÜĒNĆ$notes/data/load_AID1706_SARS_CoV_3CLĒÜĒNĆnotes/data/load_antiviral_drugsĒÜĒNĆ%notes/data/load_broad_repurposing_hubĒÜĒeĆincludefilesĒ]Ē(hOhQhShUhWhYh[h]h_hahchehgeĆmaxdepthĒKĆcaptionĒĆ0Documentation of function in DeepPurpose.datasetĒĆglobĒąĆhiddenĒČĆ
includehiddenĒČĆnumberedĒK Ć
titlesonlyĒČĆ
rawentriesĒ]ĒĆ
rawcaptionĒhmuh)hAhh*hKhh=ubah}Ē(h]Ēh!]ĒĆtoctree-wrapperĒah#]Ēh%]Ēh']Ēuh)h;hhhhhh*hNubeh}Ē(h]ĒĆdeeppurpose-datasetĒah!]Ēh#]ĒĆdeeppurpose.datasetĒah%]Ēh']Ēuh)h hhhhhh*hKubah}Ē(h]Ēh!]Ēh#]Ēh%]Ēh']ĒĆsourceĒh*uh)hĆcurrent_sourceĒNĆcurrent_lineĒNĆsettingsĒĆdocutils.frontendĒĆValuesĒďĒ)ĀĒ}Ē(hNĆ generatorĒNĆ datestampĒNĆsource_linkĒNĆ
source_urlĒNĆ
toc_backlinksĒĆentryĒĆfootnote_backlinksĒKĆ
sectnum_xformĒKĆstrip_commentsĒNĆstrip_elements_with_classesĒNĆ
strip_classesĒNĆreport_levelĒKĆ
halt_levelĒKĆexit_status_levelĒKĆdebugĒNĆwarning_streamĒNĆ tracebackĒąĆinput_encodingĒĆ utf-8-sigĒĆinput_encoding_error_handlerĒĆstrictĒĆoutput_encodingĒĆutf-8ĒĆoutput_encoding_error_handlerĒh®Ćerror_encodingĒĆUTF-8ĒĆerror_encoding_error_handlerĒĆbackslashreplaceĒĆ
language_codeĒĆenĒĆrecord_dependenciesĒNĆconfigĒNĆ id_prefixĒhĆauto_id_prefixĒĆidĒĆ
dump_settingsĒNĆdump_internalsĒNĆdump_transformsĒNĆdump_pseudo_xmlĒNĆexpose_internalsĒNĆstrict_visitorĒNĆ_disable_configĒNĆ_sourceĒh*Ć_destinationĒNĆ
_config_filesĒ]ĒĆpep_referencesĒNĆpep_base_urlĒĆ https://www.python.org/dev/peps/ĒĆpep_file_url_templateĒĆpep-%04dĒĆrfc_referencesĒNĆrfc_base_urlĒĆhttps://tools.ietf.org/html/ĒĆ tab_widthĒKĆtrim_footnote_reference_spaceĒČĆfile_insertion_enabledĒąĆraw_enabledĒKĆsyntax_highlightĒĆlongĒĆsmart_quotesĒąĆsmartquotes_localesĒ]ĒĆcharacter_level_inline_markupĒČĆdoctitle_xformĒČĆ
docinfo_xformĒKĆsectsubtitle_xformĒČĆembed_stylesheetĒČĆcloak_email_addressesĒąĆenvĒNubĆreporterĒNĆindirect_targetsĒ]ĒĆsubstitution_defsĒ}ĒĆsubstitution_namesĒ}ĒĆrefnamesĒ}ĒĆrefidsĒ}ĒĆnameidsĒ}ĒhāhsĆ nametypesĒ}ĒhāNsh}ĒhhsĆ
footnote_refsĒ}ĒĆ
citation_refsĒ}ĒĆ
autofootnotesĒ]ĒĆautofootnote_refsĒ]ĒĆsymbol_footnotesĒ]ĒĆsymbol_footnote_refsĒ]ĒĆ footnotesĒ]ĒĆ citationsĒ]ĒĆautofootnote_startĒKĆsymbol_footnote_startĒK Ć
id_counterĒĆcollectionsĒĆCounterĒďĒ}ĒÖĒRĒĆparse_messagesĒ]ĒĆtransform_messagesĒ]ĒĆtransformerĒNĆ
decorationĒNhhub.