|
a |
|
b/docs/notebooks/talk2biomodels/example_models.md |
|
|
1 |
# Exemplary Ordinary Differential Equation (ODE) models |
|
|
2 |
|
|
|
3 |
Inflammatory bowel disease (IBD) model targeting IL6R with tocilizumab. |
|
|
4 |
|
|
|
5 |
Publication: <br> |
|
|
6 |
*A multiscale model of interleukin-6-mediated immune regulation in Crohn's disease and its application in drug discovery and development.* <br > |
|
|
7 |
Dwivedi G, Fitz L, Hegen M, Martin SW, Harrold J, Heatherington A, Li C. |
|
|
8 |
CPT Pharmacometrics Syst Pharmacol 2014; 3: e89 |
|
|
9 |
|
|
|
10 |
## Original model |
|
|
11 |
|
|
|
12 |
Model [description](https://www.ebi.ac.uk/biomodels/BIOMD0000000537) and [the original version (sbml)](./Dwivedi_Model537_original.xml). |
|
|
13 |
|
|
|
14 |
## Model without annotations |
|
|
15 |
|
|
|
16 |
Download [here (sbml)](./Dwivedi_Model537_empty.xml). |
|
|
17 |
|
|
|
18 |
## Fully annotated model |
|
|
19 |
|
|
|
20 |
Download [here (sbml)](./Dwivedi_Model537_annotated.xml). |
|
|
21 |
|
|
|
22 |
## IDs of annotations |
|
|
23 |
|
|
|
24 |
Download [here (.xlsx)](./model537_mapping.xlsx). |