[3af7d7]: / aiagents4pharma / talk2scholars / tests / test_zotero_agent.py

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"""
Updated Unit Tests for the Zotero agent (Zotero Library Managent sub-agent).
"""
# pylint: disable=redefined-outer-name
from unittest import mock
import pytest
from langchain_core.messages import HumanMessage, AIMessage
from langchain_openai import ChatOpenAI
from ..agents.zotero_agent import get_app
from ..state.state_talk2scholars import Talk2Scholars
LLM_MODEL = ChatOpenAI(model="gpt-4o-mini", temperature=0)
@pytest.fixture(autouse=True)
def mock_hydra_fixture():
"""Mock Hydra configuration to prevent external dependencies."""
with mock.patch("hydra.initialize"), mock.patch("hydra.compose") as mock_compose:
cfg_mock = mock.MagicMock()
cfg_mock.agents.talk2scholars.zotero_agent.temperature = 0
cfg_mock.agents.talk2scholars.zotero_agent.zotero_agent = "Test prompt"
mock_compose.return_value = cfg_mock
yield mock_compose
@pytest.fixture
def mock_tools_fixture():
"""Mock tools to prevent execution of real API calls."""
with (
mock.patch(
"aiagents4pharma.talk2scholars.tools.s2.display_results.display_results"
) as mock_s2_display,
mock.patch(
"aiagents4pharma.talk2scholars.tools.s2.query_results.query_results"
) as mock_s2_query_results,
mock.patch(
"aiagents4pharma.talk2scholars.tools.s2."
"retrieve_semantic_scholar_paper_id."
"retrieve_semantic_scholar_paper_id"
) as mock_s2_retrieve_id,
mock.patch(
"aiagents4pharma.talk2scholars.tools.zotero.zotero_read.zotero_read"
) as mock_zotero_query_results,
):
mock_s2_display.return_value = {"result": "Mock Display Result"}
mock_s2_query_results.return_value = {"result": "Mock Query Result"}
mock_s2_retrieve_id.return_value = {"paper_id": "MockPaper123"}
mock_zotero_query_results.return_value = {"result": "Mock Search Result"}
yield [
mock_s2_display,
mock_s2_query_results,
mock_s2_retrieve_id,
mock_zotero_query_results,
]
@pytest.mark.usefixtures("mock_hydra_fixture")
def test_zotero_agent_initialization():
"""Test that S2 agent initializes correctly with mock configuration."""
thread_id = "test_thread"
with mock.patch(
"aiagents4pharma.talk2scholars.agents.zotero_agent.create_react_agent"
) as mock_create:
mock_create.return_value = mock.Mock()
app = get_app(thread_id, llm_model=LLM_MODEL)
assert app is not None
assert mock_create.called
def test_zotero_agent_invocation():
"""Test that the S2 agent processes user input and returns a valid response."""
thread_id = "test_thread"
mock_state = Talk2Scholars(messages=[HumanMessage(content="Find AI papers")])
with mock.patch(
"aiagents4pharma.talk2scholars.agents.zotero_agent.create_react_agent"
) as mock_create:
mock_agent = mock.Mock()
mock_create.return_value = mock_agent
mock_agent.invoke.return_value = {
"messages": [AIMessage(content="Here are some AI papers")],
"papers": {"id123": "AI Research Paper"},
}
app = get_app(thread_id, llm_model=LLM_MODEL)
result = app.invoke(
mock_state,
config={
"configurable": {
"thread_id": thread_id,
"checkpoint_ns": "test_ns",
"checkpoint_id": "test_checkpoint",
}
},
)
assert "messages" in result
assert "papers" in result
assert result["papers"]["id123"] == "AI Research Paper"
def test_zotero_agent_tools_assignment(request):
"""Ensure that the correct tools are assigned to the agent."""
thread_id = "test_thread"
mock_tools = request.getfixturevalue("mock_tools_fixture")
with (
mock.patch(
"aiagents4pharma.talk2scholars.agents.zotero_agent.create_react_agent"
) as mock_create,
mock.patch(
"aiagents4pharma.talk2scholars.agents.zotero_agent.ToolNode"
) as mock_toolnode,
):
mock_agent = mock.Mock()
mock_create.return_value = mock_agent
mock_tool_instance = mock.Mock()
mock_tool_instance.tools = mock_tools
mock_toolnode.return_value = mock_tool_instance
get_app(thread_id, llm_model=LLM_MODEL)
assert mock_toolnode.called
assert len(mock_tool_instance.tools) == 4
def test_s2_query_results_tool():
"""Test if the query_results tool is correctly utilized by the agent."""
thread_id = "test_thread"
mock_state = Talk2Scholars(
messages=[HumanMessage(content="Query results for AI papers")]
)
with mock.patch(
"aiagents4pharma.talk2scholars.agents.zotero_agent.create_react_agent"
) as mock_create:
mock_agent = mock.Mock()
mock_create.return_value = mock_agent
mock_agent.invoke.return_value = {
"messages": [HumanMessage(content="Query results for AI papers")],
"last_displayed_papers": {},
"papers": {
"query_results": "Mock Query Result"
}, # Ensure the expected key is inside 'papers'
"multi_papers": {},
}
app = get_app(thread_id, llm_model=LLM_MODEL)
result = app.invoke(
mock_state,
config={
"configurable": {
"thread_id": thread_id,
"checkpoint_ns": "test_ns",
"checkpoint_id": "test_checkpoint",
}
},
)
assert "query_results" in result["papers"]
assert mock_agent.invoke.called
def test_zotero_agent_hydra_failure():
"""Test exception handling when Hydra fails to load config."""
thread_id = "test_thread"
with mock.patch("hydra.initialize", side_effect=Exception("Hydra error")):
with pytest.raises(Exception) as exc_info:
get_app(thread_id, llm_model=LLM_MODEL)
assert "Hydra error" in str(exc_info.value)