[build-system]

requires = ["setuptools", "wheel"]

build-backend = "setuptools.build_meta"

[project]

name = "talk2cells"

description = "A submodule of AIAgents4Pharma for interacting with systems biology models "

readme = "README.md"

requires-python = ">=3.10"

classifiers = [

    "Programming Language :: Python :: 3",

    "License :: OSI Approved :: MIT License",

    "Operating System :: OS Independent",

]

dependencies = [

    "ipykernel==6.29.5",

    "ipython==8.31.0",

    "langchain-openai==0.3.0",

    "langgraph==0.2.62",

    "openai==1.59.6",

    "pandas==2.2.3",

    "pydantic==2.10.5",

    "requests==2.32.3",

    "streamlit==1.41.1",

    "tabulate==0.9.0",

    "anndata==0.11.3",

    "h5py==3.13.0",

    "igraph==0.11.8",

    "ipykernel==6.29.5",

    "ipython==8.32.0",

    "numpy==2.1.3",

    "nbformat==5.10.4",

    "scipy==1.15.2",

    "tqdm==4.67.1",

    "umap-learn==0.5.7",

    "plotly-express==0.4.1",

    "seaborn==0.13.2",

    "scanpy==1.11.0"

]

dynamic = ["version"]

# Package discovery for the submodule

[tool.setuptools]

packages = [

    "talk2cells",

    "talk2cells.agents",

    "talk2cells.tools",

    "talk2cells.states"

]