--- a
+++ b/man/getUpDownCluster.Rd
@@ -0,0 +1,30 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/getUpDownCluster.R
+\name{getUpDownCluster}
+\alias{getUpDownCluster}
+\title{Up-Down clustering}
+\usage{
+getUpDownCluster(X, diff_threshold = 0)
+}
+\arguments{
+\item{X}{a dataframe or list of dataframe with the same number of rows.}
+
+\item{diff_threshold}{a number (optional, default 0), if the difference between 2 values is lower than the threshold, the returned sign will be 0 (no variation).}
+}
+\description{
+Performs a clustering based on the signs of variation between 2 timepoints.
+Optionally, if the difference between 2 timepoints is lower than a given threshold, 
+the returned difference will be 0.
+}
+\examples{
+demo <- suppressWarnings(get_demo_cluster())
+X <- list(X = demo$X, Y = demo$Y, Z = demo$Z)
+res <- getUpDownCluster(X)
+class(res)
+getCluster(res)
+
+X <- demo$X
+res <- getUpDownCluster(X)
+res <- getUpDownCluster(X, diff_threshold = 15)
+res_cluster <- getCluster(res)
+}