--- a
+++ b/man/scAImodel.Rd
@@ -0,0 +1,42 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/scAI_model.R
+\name{scAImodel}
+\alias{scAImodel}
+\title{Solving the optimization problem in scAI}
+\usage{
+scAImodel(X1, X2, K, s = 0.25, alpha = 1, lambda = 1e+05,
+  gamma = 1, maxIter = 500, stop_rule = 1, R.init = NULL,
+  W1.init = NULL, W2.init = NULL, H.init = NULL, Z.init = NULL)
+}
+\arguments{
+\item{X1}{Single-cell transcriptomic data matrix (norm.data)}
+
+\item{X2}{Single-cell epigenomic data matrix (norm.data)}
+
+\item{K}{Rank of inferred factors}
+
+\item{s}{Probability of Bernoulli distribution}
+
+\item{alpha}{model parameter}
+
+\item{lambda}{model parameter}
+
+\item{gamma}{model parameter}
+
+\item{maxIter}{Maximum number of iteration}
+
+\item{stop_rule}{Stop rule to be used}
+
+\item{R.init}{initialization of R}
+
+\item{W1.init}{initialization of W1}
+
+\item{W2.init}{initialization of W2}
+
+\item{H.init}{initialization of H}
+
+\item{Z.init}{initialization of Z}
+}
+\description{
+Solving the optimization problem in scAI
+}