72 lines (70 with data), 2.0 kB

# Generated by roxygen2: do not edit by hand

S3method(print,RWRM_Results)
export(combine_layers)
export(get_graph_stats)
export(get_grn)
export(get_interaction_from_ORA)
export(get_interaction_from_correlation)
export(get_interaction_from_database)
export(plot_rwr_subnetwork)
export(random_walk_restart)
export(rwr_find_closest_type)
export(rwr_find_seeds_between_attributes)
export(summary_plot_rwr_attributes)
import(GO.db)
import(ggplot2)
importFrom(AnnotationDbi,keytypes)
importFrom(Matrix,Diagonal)
importFrom(Matrix,bdiag)
importFrom(Matrix,colSums)
importFrom(Matrix,t)
importFrom(dplyr,across)
importFrom(dplyr,all_of)
importFrom(dplyr,everything)
importFrom(dplyr,filter)
importFrom(dplyr,group_by)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,n)
importFrom(dplyr,pull)
importFrom(dplyr,select)
importFrom(dplyr,summarise)
importFrom(dplyr,top_n)
importFrom(gprofiler2,gconvert)
importFrom(gprofiler2,gost)
importFrom(igraph,E)
importFrom(igraph,V)
importFrom(igraph,add_vertices)
importFrom(igraph,adjacent_vertices)
importFrom(igraph,as.undirected)
importFrom(igraph,as_adjacency_matrix)
importFrom(igraph,degree)
importFrom(igraph,delete_vertex_attr)
importFrom(igraph,delete_vertices)
importFrom(igraph,ecount)
importFrom(igraph,edge_density)
importFrom(igraph,graph_from_adjacency_matrix)
importFrom(igraph,graph_from_biadjacency_matrix)
importFrom(igraph,graph_from_data_frame)
importFrom(igraph,induced_subgraph)
importFrom(igraph,is_weighted)
importFrom(igraph,set_vertex_attr)
importFrom(igraph,simplify)
importFrom(igraph,union)
importFrom(igraph,vcount)
importFrom(igraph,vertex_attr)
importFrom(magrittr,"%>%")
importFrom(methods,is)
importFrom(minet,aracne)
importFrom(minet,build.mim)
importFrom(purrr,imap_dfr)
importFrom(purrr,is_empty)
importFrom(purrr,map)
importFrom(purrr,map2)
importFrom(purrr,map_dfr)
importFrom(purrr,reduce)
importFrom(purrr,set_names)
importFrom(stats,cor)
importFrom(stats,na.omit)
importFrom(tibble,rownames_to_column)
importFrom(tidyr,pivot_longer)