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b/man/get_interaction_from_database.Rd |
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% Generated by roxygen2: do not edit by hand |
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% Please edit documentation in R/get_interaction_from_database.R |
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\name{get_interaction_from_database} |
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\alias{get_interaction_from_database} |
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\title{Get interaction from database} |
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\usage{ |
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get_interaction_from_database(X, db = NULL, type = "db", user.ego = FALSE) |
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} |
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\arguments{ |
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\item{X}{vector of nodes or list of vectors} |
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\item{db}{data.frame (with two columns: from, to) or igraph} |
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\item{type}{character added to node metadata} |
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\item{user.ego}{logical, if user.ego == TRUE looks for first degree neighbors |
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in db and add 'mode' metadata ('core'/'extended')} |
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} |
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\value{ |
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a subset graph of db from X list of nodes |
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} |
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\description{ |
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Returns an interaction graph from a vector of nodes (or a list of vectors) |
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and an interaction database (data.frame or igraph) |
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} |
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\examples{ |
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X <- letters[1:4] |
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db <- as.data.frame(list(from = sample(letters[1:10], replace = TRUE), |
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to = sample(letters[1:10], replace = TRUE))) |
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sub <- get_interaction_from_database(X, |
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db) |
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db.graph <- igraph::graph_from_data_frame(db, |
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directed=FALSE) |
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sub <- get_interaction_from_database(X, |
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db) |
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} |