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1 | # multiOmicsIntegration |
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2 | # Github Repository for multiOmics Integration project involving genomics, epigenomics and transcriptomics data |
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3 | The datasets used in the manuscript can be downloaded from Zenodo |
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4 | Seal, Dibyendu, Das, Vivek, Goswami, Saptarshi, & De, Rajat. (2020). Datasets used for Multi-omics integration using Deep Learning and other state-of-the-art regression models (Version v1) [Data set]. Zenodo. http://doi.org/10.5281/zenodo.3712496 |
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6 | Currently there are 3 Python notebooks in this Github repository |
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7 | 1. `Pre-processing.ipynb` |
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8 | 2. `DNAm_CNA_to_RNAseq.ipynb` |
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9 | 3. `DNAm_to_CNA.ipynb` |
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11 | The above notebooks can be used to run the codes used for multi-omics integration using Deep Learning and state-of-the-art regression methods. |