|
a |
|
b/vignettes/references.bib |
|
|
1 |
@Article{graphite:2018, |
|
|
2 |
title = {{metaGraphite} - a new layer of pathway annotation to get metabolite networks}, |
|
|
3 |
author = {Gabriele Sales and Enrica Calura and Chiara Romualdi}, |
|
|
4 |
journal = {Bioinformatics}, |
|
|
5 |
year = {2018}, |
|
|
6 |
url = {https://academic.oup.com/bioinformatics/advance-article/doi/10.1093/bioinformatics/bty719/5090451}, |
|
|
7 |
} |
|
|
8 |
|
|
|
9 |
@Manual{AnnotationDbi:2019, |
|
|
10 |
title = {AnnotationDbi: Manipulation of SQLite-based annotations in Bioconductor}, |
|
|
11 |
author = {Hervé Pagès and Marc Carlson and Seth Falcon and Nianhua Li}, |
|
|
12 |
year = {2019}, |
|
|
13 |
note = {R package version 1.48.0}, |
|
|
14 |
} |
|
|
15 |
|
|
|
16 |
@Article{Quiros:2017, |
|
|
17 |
author = {Quir{\'o}s, P M and Prado, M A and Zamboni, N and |
|
|
18 |
D'Amico, D and Williams, R W and Finley, D and |
|
|
19 |
Gygi, S P and Auwerx, J}, |
|
|
20 |
title = {Multi-omics analysis identifies {ATF4} as a key |
|
|
21 |
regulator of the mitochondrial stress response in |
|
|
22 |
mammals.}, |
|
|
23 |
journal = {J Cell Biol}, |
|
|
24 |
year = {2017}, |
|
|
25 |
month = {07}, |
|
|
26 |
number = {7}, |
|
|
27 |
volume = {216}, |
|
|
28 |
pages = {2027-2045}, |
|
|
29 |
doi = {10.1083/jcb.201702058}, |
|
|
30 |
PMID = {28566324} |
|
|
31 |
} |
|
|
32 |
|
|
|
33 |
@Manual{CarlsonHs:2019, |
|
|
34 |
title = {org.Hs.eg.db: Genome wide annotation for Human}, |
|
|
35 |
author = {Marc Carlson}, |
|
|
36 |
year = {2019}, |
|
|
37 |
note = {R package version 3.10.0}, |
|
|
38 |
} |
|
|
39 |
|
|
|
40 |
@Manual{CarlsonRn:2019, |
|
|
41 |
title = {org.Rn.eg.db: Genome wide annotation for Rat}, |
|
|
42 |
author = {Marc Carlson}, |
|
|
43 |
year = {2019}, |
|
|
44 |
note = {R package version 3.10.0}, |
|
|
45 |
} |
|
|
46 |
|
|
|
47 |
@Manual{CarlsonMm:2019, |
|
|
48 |
title = {org.Mm.eg.db: Genome wide annotation for Mouse}, |
|
|
49 |
author = {Marc Carlson}, |
|
|
50 |
year = {2019}, |
|
|
51 |
note = {R package version 3.10.0}, |
|
|
52 |
} |
|
|
53 |
|
|
|
54 |
@article{Stouffer:1949, |
|
|
55 |
title={The american soldier: Adjustment during army life.(studies in social psychology in world war ii), vol. 1}, |
|
|
56 |
author={Stouffer, Samuel A and Suchman, Edward A and DeVinney, Leland C and Star, Shirley A and Williams Jr, Robin M}, |
|
|
57 |
year={1949}, |
|
|
58 |
publisher={Princeton Univ. Press} |
|
|
59 |
} |
|
|
60 |
|
|
|
61 |
@article{Edgington:1972, |
|
|
62 |
title={An additive method for combining probability values from independent experiments}, |
|
|
63 |
author={Edgington, Eugene S}, |
|
|
64 |
journal={The Journal of Psychology}, |
|
|
65 |
volume={80}, |
|
|
66 |
number={2}, |
|
|
67 |
pages={351--363}, |
|
|
68 |
year={1972}, |
|
|
69 |
publisher={Taylor \& Francis} |
|
|
70 |
} |
|
|
71 |
|
|
|
72 |
@book{Fisher:1932, |
|
|
73 |
title={Statistical Methods for Research Workers - Revised and Enlarged}, |
|
|
74 |
author={Fisher, S R A}, |
|
|
75 |
year={1932}, |
|
|
76 |
publisher={Edinburgh, London} |
|
|
77 |
} |
|
|
78 |
|
|
|
79 |
@article{Zyla:2017, |
|
|
80 |
title={Ranking metrics in gene set enrichment analysis: do they matter?}, |
|
|
81 |
author={Joanna Zyla, Michal Marczyk, January Weiner, and Joanna Polanska}, |
|
|
82 |
journal={BMC Bioinformatics}, |
|
|
83 |
volume={18}, |
|
|
84 |
number={256}, |
|
|
85 |
year={2017}, |
|
|
86 |
publisher={Springer Nature}, |
|
|
87 |
doi={https://doi.org/10.1186/s12859-017-1674-0} |
|
|
88 |
} |