--- a
+++ b/man/getMappedFeatures.Rd
@@ -0,0 +1,36 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/feature_processing.R
+\name{getMappedFeatures}
+\alias{getMappedFeatures}
+\title{Wrapper to get feature mappings.}
+\usage{
+getMappedFeatures(
+  pathways,
+  returnID = "SYMBOL",
+  organism = "hsapiens",
+  which = "proteins",
+  useLocal = TRUE
+)
+}
+\arguments{
+\item{pathways}{List of pathway definitions.}
+
+\item{returnID}{String specifying the returned ID format.}
+
+\item{organism}{String defining the organism of analysis.}
+
+\item{which}{Mode to extract the features, either \'proteins\' or
+\'metabolites\'.}
+
+\item{useLocal}{Boolean specifying whether or not to use the local
+preprocessed mapping.}
+}
+\value{
+List of mapped features for an omics layer.
+}
+\description{
+Feature mappings will be used from hard disk in case they have been
+mapped before and `useLocal` is not set to be FALSE.
+In other cases, a feature extraction will be done and the results are
+stored for a following occasion.
+}