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b/inst/NEWS.Rd |
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\name{NEWS} |
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\title{News for Package \pkg{multiGSEA}} |
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\section{ Changes in version 0.99.0}{ |
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\itemize{ |
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\item Package added to Bioconductor |
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}} |
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\section{ Changes in version 1.1.1 (2020-11-05)}{ |
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\itemize{ |
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\item Bug fix. Prevent duplicated pathway title to cause an error. |
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\item Include new function to enumerate duplicted pathway titles with trailing numbers. |
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}} |
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\section{ Changes in version 1.1.2 (2020-11-07)}{ |
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\itemize{ |
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\item Speed-up the metabolite ID mapping between different ID formats |
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}} |
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\section{ Changes in version 1.1.3 (2020-11-19)}{ |
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\itemize{ |
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\item Prevent warning due to import of two different select() functions. |
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}} |
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\section{ Changes in version 1.1.4 (2020-12-09)}{ |
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\itemize{ |
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\item Add the correct citation of the BMC Bioinformatics article. |
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}} |
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\section{ Changes in version 1.1.5 (2021-04-19)}{ |
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\itemize{ |
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\item Typos fixed. |
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\item Add information and reference about metrics to calculate the feature ranks. |
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}} |
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\section{ Changes in version 1.1.7 (2021-05-10)}{ |
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\itemize{ |
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\item Remove Biocarta database from vignette - it's no longer supported by graphite R package. |
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\item List all available databases in error message. |
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}} |
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\section{ Changes in version 1.13.1 (2024-04-26)}{ |
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\itemize{ |
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\item Utilize by default non-adjusted single-omics p-values for aggregation into a composite p-value. Adjustment for multiple testing will be done on the combined multi-omics p-values. |
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\item Inlcude legacy option for p-value combination to ensure reproducibility. |
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}} |
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\section{ Changes in version 1.15.1 (2024-10-22)}{ |
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\itemize{ |
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\item Remove proteomics feature with empty identifier to prevent errors in vignette building. |
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}} |