--- a +++ b/DESCRIPTION @@ -0,0 +1,47 @@ +Package: multiGSEA +Type: Package +Title: Combining GSEA-based pathway enrichment with multi omics data integration +Version: 1.17.3 +Date: 2020-03-05 +Authors@R: c( + person( "Sebastian", "Canzler", email = "sebastian.canzler@ufz.de", role = c("aut", "cre"), comment = c(ORCID = "0000-0001-7935-9582")), + person( "Jörg", "Hackermüller", email = "joerg.hackermueller@ufz.de", role = "aut", comment = c( ORCID = "0000-0003-4920-7072"))) +Description: Extracted features from pathways derived from 8 different databases + (KEGG, Reactome, Biocarta, etc.) can be used on transcriptomic, proteomic, and/or + metabolomic level to calculate a combined GSEA-based enrichment score. +License: GPL-3 +Depends: R (>= 4.0.0) +Imports: + magrittr, + graphite, + AnnotationDbi, + metaboliteIDmapping, + dplyr, + fgsea, + metap, + rappdirs, + rlang, + methods +VignetteBuilder: knitr +biocViews: GeneSetEnrichment, Pathways, Reactome, BioCarta +URL: https://github.com/yigbt/multiGSEA +BugReports: https://github.com/yigbt/multiGSEA/issues +Encoding: UTF-8 +NeedsCompilation: no +RoxygenNote: 7.2.0 +Suggests: + org.Hs.eg.db, + org.Mm.eg.db, + org.Rn.eg.db, + org.Ss.eg.db, + org.Bt.eg.db, + org.Ce.eg.db, + org.Dm.eg.db, + org.Dr.eg.db, + org.Gg.eg.db, + org.Xl.eg.db, + org.Cf.eg.db, + knitr, + rmarkdown, + BiocStyle, + testthat (>= 2.1.0)