mouse_organogenesis-m-om / Git / Commit [fe0e8b]

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mouse_organogenesis-m-om

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Commit [fe0e8b]

Initial commit

Authored by: AlyssaS 2025-04-19

Browse code at this revision

Parent: [ae5712]

Child: [6c3e5b]

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added	rna_atac/snakemake/Snakefile
added	rna_atac/snakemake/config_ricard_babraham.yaml
added	rna_atac/snakemake/run_cluster.sh
added	rna_atac/virtual_chipseq_library/link_TF2genes_virtual_chip.R
added	rna_atac/virtual_chipseq_library/metacells/analysis/virtual_chipseq_metacells_exploration.R
added	rna_atac/virtual_chipseq_library/metacells/create_virtual_chipseq_library_metacells.R
added	rna_atac/virtual_chipseq_library/metacells/virtual_chipseq_compare_pseudobulk_vs_metacells.R
added	rna_atac/virtual_chipseq_library/pseudobulk/analysis/stats/virtual_chipseq_plot_individual_peaks.R
added	rna_atac/virtual_chipseq_library/pseudobulk/analysis/stats/virtual_chipseq_plot_stats.R
added	rna_atac/virtual_chipseq_library/pseudobulk/analysis/validation/virtual_chipseq_validation.R
added	rna_atac/virtual_chipseq_library/pseudobulk/analysis/validation/virtual_chipseq_validation_roc_curves.R
added	rna_atac/virtual_chipseq_library/pseudobulk/analysis/virtual_chipseq_exploration.R
added	rna_atac/virtual_chipseq_library/pseudobulk/create_virtual_chipseq_library_pseudobulk.R
added	settings.R
added	settings.py
added	utils.R
added	utils.py

rna_atac/snakemake/Snakefile Diff Switch to side-by-side view

rna_atac/snakemake/config_ricard_babraham.yaml Diff Switch to side-by-side view

rna_atac/snakemake/run_cluster.sh Diff Switch to side-by-side view

rna_atac/virtual_chipseq_library/link_TF2genes_virtual_chip.R Diff Switch to side-by-side view

rna_atac/virtual_chipseq_library/metacells/analysis/virtual_chipseq_metacells_exploration.R Diff Switch to side-by-side view

rna_atac/virtual_chipseq_library/metacells/create_virtual_chipseq_library_metacells.R Diff Switch to side-by-side view

rna_atac/virtual_chipseq_library/metacells/virtual_chipseq_compare_pseudobulk_vs_metacells.R Diff Switch to side-by-side view

rna_atac/virtual_chipseq_library/pseudobulk/analysis/stats/virtual_chipseq_plot_individual_peaks.R Diff Switch to side-by-side view

rna_atac/virtual_chipseq_library/pseudobulk/analysis/stats/virtual_chipseq_plot_stats.R Diff Switch to side-by-side view

rna_atac/virtual_chipseq_library/pseudobulk/analysis/validation/virtual_chipseq_validation.R Diff Switch to side-by-side view

rna_atac/virtual_chipseq_library/pseudobulk/analysis/validation/virtual_chipseq_validation_roc_curves.R Diff Switch to side-by-side view

rna_atac/virtual_chipseq_library/pseudobulk/analysis/virtual_chipseq_exploration.R Diff Switch to side-by-side view

rna_atac/virtual_chipseq_library/pseudobulk/create_virtual_chipseq_library_pseudobulk.R Diff Switch to side-by-side view

settings.R Diff Switch to side-by-side view

settings.py Diff Switch to side-by-side view

utils.R Diff Switch to side-by-side view

utils.py Diff Switch to side-by-side view

<< < 1 .. 9 10 11 (Page 11 of 11)