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Commit [9e8054]

Initial commit

Authored by: AlyssaS 2025-04-19

Browse code at this revision

Parent: [5b3911]

Child: [92b202]

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added	docs/source/_example_APP/cell_cycle.ipynb
added	docs/source/_example_APP/legend.pdf
added	docs/source/_example_APP/mytree.nwk
added	docs/source/_example_APP/mytree.txt
added	docs/source/_example_MEGMA/convert.ipynb
added	docs/source/_example_MEGMA/dataset/AUS_dfx.csv
added	docs/source/_example_MEGMA/dataset/AUS_dfy.csv
added	docs/source/_example_MEGMA/dataset/CHN_dfx.csv
added	docs/source/_example_MEGMA/dataset/CHN_dfy.csv
added	docs/source/_example_MEGMA/dataset/DEU_dfx.csv
added	docs/source/_example_MEGMA/dataset/DEU_dfy.csv
added	docs/source/_example_MEGMA/dataset/FRA_dfx.csv
added	docs/source/_example_MEGMA/dataset/FRA_dfy.csv
added	docs/source/_example_MEGMA/dataset/USA_dfx.csv
added	docs/source/_example_MEGMA/dataset/USA_dfy.csv
added	docs/source/_example_MEGMA/dataset/mOTUs_new_taxonomic_profile.txt
added	docs/source/_example_MEGMA/example_00_Introduction.ipynb
added	docs/source/_example_MEGMA/example_01_MEGMA.ipynb
added	docs/source/_example_MEGMA/example_02_AggMapNet.ipynb
added	docs/source/_example_MEGMA/example_03_Explaination.ipynb
added	docs/source/_example_MEGMA/example_04_toplogical_analyisis.ipynb
added	docs/source/_example_MEGMA/example_05_embedding_grouping.ipynb
added	docs/source/_example_MEGMA/images/GFI_megma_all_vs_megma_country.pdf
added	docs/source/_example_MEGMA/images/GFI_megma_all_vs_megma_country.png
added	docs/source/_example_MEGMA/images/MEGMA-AggMapNet.png

docs/source/_example_APP/cell_cycle.ipynb Diff Switch to unified view

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docs/source/_example_APP/mytree.nwk Diff Switch to unified view

docs/source/_example_APP/mytree.txt Diff Switch to unified view

docs/source/_example_MEGMA/convert.ipynb Diff Switch to unified view

docs/source/_example_MEGMA/dataset/AUS_dfx.csv Diff Switch to unified view

docs/source/_example_MEGMA/dataset/AUS_dfy.csv Diff Switch to unified view

docs/source/_example_MEGMA/dataset/CHN_dfx.csv Diff Switch to unified view

docs/source/_example_MEGMA/dataset/CHN_dfy.csv Diff Switch to unified view

docs/source/_example_MEGMA/dataset/DEU_dfx.csv Diff Switch to unified view

docs/source/_example_MEGMA/dataset/DEU_dfy.csv Diff Switch to unified view

docs/source/_example_MEGMA/dataset/FRA_dfx.csv Diff Switch to unified view

docs/source/_example_MEGMA/dataset/FRA_dfy.csv Diff Switch to unified view

docs/source/_example_MEGMA/dataset/USA_dfx.csv Diff Switch to unified view

docs/source/_example_MEGMA/dataset/USA_dfy.csv Diff Switch to unified view

docs/source/_example_MEGMA/dataset/mOTUs_new_taxonomic_profile.txt Diff Switch to unified view

docs/source/_example_MEGMA/example_00_Introduction.ipynb Diff Switch to unified view

docs/source/_example_MEGMA/example_01_MEGMA.ipynb Diff Switch to unified view

docs/source/_example_MEGMA/example_02_AggMapNet.ipynb Diff Switch to unified view

docs/source/_example_MEGMA/example_03_Explaination.ipynb Diff Switch to unified view

docs/source/_example_MEGMA/example_04_toplogical_analyisis.ipynb Diff Switch to unified view

docs/source/_example_MEGMA/example_05_embedding_grouping.ipynb Diff Switch to unified view

docs/source/_example_MEGMA/images/GFI_megma_all_vs_megma_country.pdf

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docs/source/_example_MEGMA/images/GFI_megma_all_vs_megma_country.png

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