--- a +++ b/environment_minimal.yml @@ -0,0 +1,37 @@ +name: babel +channels: + - pytorch + - anaconda + - conda-forge + - bioconda + - numba + - defaults +dependencies: + - python=3.7 + - pip + - anndata=0.6.22 + - astropy=4.0 + - cached_property + - pytorch::captum=0.2 + - intervaltree + - gdown=4.0 + - conda-forge::leidenalg=0.7 + - conda-forge::louvain=0.6 + - matplotlib + - numba::numba==0.51.2 + - numpy=1.17 + - pytorch=1.3 + - pandas=0.25 + - seaborn + - scanpy=1.4.4 + - scikit-learn=0.21 + - scipy=1.3.2 + - skorch=0.7 + - sortedcontainers + - statsmodels=0.10 + - tensorboard=1.15 + - tqdm + - conda-forge::umap-learn=0.3.10 + - pip: + - mpl-scatter-density + - adjustText