[413088]: / tests / testthat / test-spatialpoints.R

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# Testing functions of manipulating spatialpoints ####
test_that("spatialpoints", {
# get data
data("visium_data")
# get spatial points
expect_equal(head(vrSpatialPoints(visium_data)),
c("AAAGGCTCTCGCGCCG-1_Assay1","AAATGGCCCGTGCCCT-1_Assay1","AAATTACACGACTCTG-1_Assay1","AAGACATACGTGGTTT-1_Assay1",
"ACCTACTATAAATCTA-1_Assay1", "ACGCGGGCCAAGGACA-1_Assay1"))
expect_equal(head(vrSpatialPoints(visium_data, assay = "Assay1")),
c("AAAGGCTCTCGCGCCG-1_Assay1","AAATGGCCCGTGCCCT-1_Assay1","AAATTACACGACTCTG-1_Assay1","AAGACATACGTGGTTT-1_Assay1",
"ACCTACTATAAATCTA-1_Assay1", "ACGCGGGCCAAGGACA-1_Assay1"))
# subset on spatial points
spatialpoints <- vrSpatialPoints(visium_data)
visium_data_sub <- subset(visium_data, spatialpoints = spatialpoints[1:5])
expect_equal(1,1L)
})